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Sed0013650 (gene) of Chayote v1 genome

Gene IDSed0013650
OrganismSechium edule (Chayote v1)
Descriptioncytochrome c oxidase subunit 5C-like
Genome locationLG09:37087370..37090900
RNA-Seq ExpressionSed0013650
SyntenySed0013650
Gene Ontology termsGO:0005746 - mitochondrial respirasome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008432 - Cytochrome c oxidase subunit 5c


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646364.1 hypothetical protein Csa_016441 [Cucumis sativus]1.6e-2596.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

XP_004135996.1 cytochrome c oxidase subunit 5C [Cucumis sativus]1.6e-2596.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

XP_022146752.1 cytochrome c oxidase subunit 5C-like [Momordica charantia]3.6e-2598.36Show/hide
Query:  AGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        AGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
Subjt:  AGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

XP_023548933.1 cytochrome c oxidase subunit 5C-like [Cucurbita pepo subsp. pepo]7.2e-2696.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

XP_038897009.1 cytochrome c oxidase subunit 5C-like [Benincasa hispida]3.2e-2698.41Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

TrEMBL top hitse value%identityAlignment
A0A0A0KB82 Uncharacterized protein7.8e-2696.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A1S3BRM0 cytochrome c oxidase subunit 5C-like7.8e-2696.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A5D3D2T3 Cytochrome c oxidase subunit Vc7.8e-2696.83Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEI VVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A6J1JM28 cytochrome c oxidase subunit 5C-like1.7e-2595.24Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEIL GMG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

A0A6J1L0D4 cytochrome c oxidase subunit 5C-like1.7e-2595.24Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        AAGRVAHVTL GPSVVKEILT MG+ALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

SwissProt top hitse value%identityAlignment
Q42841 Cytochrome c oxidase subunit 5C1.4e-1970.97Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        A GRVAH TL GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Q8VY39 Cytochrome c oxidase subunit 5C-21.4e-1975.41Show/hide
Query:  GRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        GRVAH  L GPSVVKE++ G  L L AG  WKMH WNEQRK RAFYDLLEKGEI VVVDEE
Subjt:  GRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9FLK2 Probable cytochrome c oxidase subunit 5C-35.2e-1968.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9LZQ0 Cytochrome c oxidase subunit 5C-26.8e-1968.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  +VAH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVV  EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Q9SXX7 Cytochrome c oxidase subunit 5C2.3e-1969.35Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE
        A GR+AH TL GPSVVKEI  G+ L L AG  WKMH WNEQRK R+FYD+LEKG+I VVV+E
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDE

Arabidopsis top hitse value%identityAlignment
AT2G47380.1 Cytochrome c oxidase subunit Vc family protein4.1e-1966.67Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  +VAH TL GPSVVKE+  G+ L L AG  WKMH WNEQRK R FYDLLE+GEI VV  EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.1 Cytochrome c oxidase subunit Vc family protein3.7e-2068.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.2 Cytochrome c oxidase subunit Vc family protein3.7e-2068.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.3 Cytochrome c oxidase subunit Vc family protein3.7e-2068.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

AT5G61310.4 Cytochrome c oxidase subunit Vc family protein3.7e-2068.25Show/hide
Query:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
        A  ++AH TL GPSVVKE++ G+ L L AG  WKMH WNEQRK R FYDLLE+GEIGVVV EE
Subjt:  AAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCTGCTGGTAGGGTGGCTCACGTGACACTTACAGGACCAAGTGTGGTGAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGGAGCTTTTGGAAAAT
GCATCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTGCTGGAGAAGGGTGAGATTGGAGTCGTCGTTGACGAAGAATAG
mRNA sequenceShow/hide mRNA sequence
GAAGAATGTTATGGTCCTCAATGTTAACTTTGGCGACGGGTGCGCATTGTGGTAAAGACTTTACCAAACCGAGTAAGGCGCATGGACCCGACTCGGTTTTCACCCCTTGG
CATCGGTCCAATCAAACCGGTTGAGGGTTCAGACCGATTCCTGAAGCAACAATTTATCTAATGTTTTCTCCTTTTTTGTTTTTTGAAATAGTTTTCTTCTTTTTTGTTAT
GTAGCGAAAAAGTTGAATTAAAAAGCCGAAGACCGCAACGCAGTTTCTGTTATCCGGCGCCATTCAATCGCTTCGATCTTCTCTGTGTATTAAAAGGTTTGCACCTGGGC
TCAAGTCCAACCTTTTGCGCCTCGCTTGTCCCAGGTGAGGCGCGTGTAATAAGGCACGCGCCTTATGACGCCTTACGTGAAGCCCCGGGCGCTAAAAGGCGCGCACCTCG
TGGGATTTTTTAATTTCCTTTGCATTTTTTGTGTTTTAGATCTCATAATAGGTCATTTGAAGTGTGTGAAGGTTGATGGTTGAATATTATGTATGTTTTATATATTATTT
TTTGTTACAACTTCATTTATGTCCATGAAAAGTGTTTTTATTGTGTATACACACACATATATAAATTTTTTGTGTTTTATTTATATATAGTGCGCCTTAAGTAAAATAGC
CCTCGCCTTTTGGTGCGCCTTGCGCTTCAGGCTCCAGAGGGTCATTGCGCCTTAGTGCGCCTTGCAGTTTTTAAAACACTGTGTGTGTGTGTTTTTTTTTACATAAAGAA
TTGAAATGCATGTATTACATGAATAGATGATATACAATAGAGAGAATTTCAAAGTGAAATAAGAGAGAATGAGTTCAATCTACAATGGTGCCTAAGATTTATTATTAGTG
GGGTCATTTTGATATAAAAAAACTAGAGAGGGGAGGATAAGAATTTCAATCCATAACAAGAGGCTAGACTAGTAGATTACCAGGACACACATAATAATATCAACAAAGAT
GATAGATACATAATTTTGACCCTTGTTGTCCCAAGGGGTGGTACAGTGGTTGAAGACTTGGGGTTTGAAGGTATACTCCCTTCAAGGTCTCGGTTTCAAAACTCACCTGT
GACATTACTCCTTCGATGTCTCTGGTGCTTGGCCTAGGGACGGGCGTGGTTACTTTGTTTAAAAAAAAAAATGATGGACCGTTGTTGTCTTTCTTCATTTCCCATAGGAC
CAAAATCAAATGAGTTCCTCTAATTGACTACATTGTTTGATGGTAGAGGACGTTTTGTTTCATACACCTCTAAAGACCATTTTGGCTACTTTGTAGTGCATTTGACTTAG
AGAGAAATAAAATTATCTTTAGGGTTTGTAGTGCATTTGACTTAGAGAGAAATAAAATTATCTTTAGGGATGAATATACTTTGGGAGGAGATTACATATGTAGGGATGTC
TCATATCCCTTCGGGTGTTTACCTCTCACTCACTAGAAATACCTTTTTTTCCTTATATCCATAAATGTCTAGTCTAACTTCGACTATTTTCATAGGACATGTGTTTGACC
CTAGTACATTTTATTCTCAAGATATTCATAAGAAACAAATTTCTAGGTAAGTTGGTGGCTTTGAACCCATTCTTACTAAGTACTTTAGGGGGTGTTTGTTTGCCATATTT
AAAGAGGATTTAGATGAAGGATTTACTAACTCCTCCTCAAAACCTACATCCAAACGAGTTTTTACTAACTCCTCATTTTTACTTTAAAAATAACTCCTCATTTCTAACCA
TTTATTTCTAATCATTCATTCATAACCACTCAATCATTTCTAACCACTCATTTCTAATCATTAATTTCAAATAACTCATTTTTAACCACTCATTCTTAATCATTCATTTT
TTAAGTACTCAAAATAAATACTCATTTTAAATCCACATCCAAACAAAGTTTTAACTCTTAACTCCTCTACACAAAAACCATATCCAAACGAGTTTTATGTTACAACTCTC
AATTTTCAACTACTCAAAATAACTCTTCTATATAACTCCTTAAGCTAAATCCTCCTTAAATATGGTAAACAAACACCCTATATAATTTCTAAAGCCTTTACTTGATCAAT
CGTGATTTAGAAAGTTTTGTAACTTCTCATTTTGAACCATTGGAAACCTTTTTACGTCAAGGCTTTTGCCTTTTGTCTTGACTTCCTTTAGCTTGGGCTGATTTCTTTTG
TGTATTTCTCATTTTGTATATTGTTTCATTTCTGATTTCTCCATAAAAGTAAACTAATACTAATGTCAATAAATGAATCCTTTTCCTTCACTTTGTTGAAGTAAAAGTCC
CCCAAGGGCCTCCTTATAGTGGAGGGAAGTTCTGATTTCCCAATTAAAAAAAAAAAGTTAGCTTCTTGAAGGATGAAAGTCTTTATTATTGAGCACACCCTTGTCCTTGC
AGATAGTTCTGAACAGAACTACATTCTTGTGGTTAGGATAACTTTTTCTTATAATTGTTTGATTTCGATCTCTCGGGCAGGTTTCTTACCGTTTTCGAACGAGAAAAGCA
AATGGCTGCTGCTGGTAGGGTGGCTCACGTGACACTTACAGGACCAAGTGTGGTGAAGGAGATATTGACAGGAATGGGACTTGCTTTGTTTGCTGGGAGCTTTTGGAAAA
TGCATCAATGGAATGAGCAGAGGAAAGTGAGAGCTTTCTACGATCTGCTGGAGAAGGGTGAGATTGGAGTCGTCGTTGACGAAGAATAGATCTTTATCCGTTAATCGTCA
TCTTGTGGAACACATTCACCAGTTTGTTTATCATTTTGTTCTGAAAACCTCTTTGTATTGCTCTTGGATTAGAGATGACATGTTTATCTTTTGCAACAATTTCTGCAAAT
AATACATGATTGAGACAGATTTTGCTGGACTTAGAAAAGCAATTTTCATGATTTATTATAAAGCATGCATCCCCTTTTGCTCGGTTTCTTCTA
Protein sequenceShow/hide protein sequence
MAAAGRVAHVTLTGPSVVKEILTGMGLALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE