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Sed0013679 (gene) of Chayote v1 genome

Gene IDSed0013679
OrganismSechium edule (Chayote v1)
DescriptionRetrotransposon-derived protein PEG10, putative
Genome locationLG04:3940003..3940420
RNA-Seq ExpressionSed0013679
SyntenySed0013679
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038606.1 putative Retrotransposon-derived protein PEG10 [Cucumis melo var. makuwa]2.8e-2468.57Show/hide
Query:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV
        ME + AES+DEAMR SK+AI+CA+AA LLSSLKSSQNR L AT  EQ++E + LRK+VGDLKI+LA ER+RNKRIKLCGL+EF LQ +LV+SLSS  +FV
Subjt:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV

Query:  AFSLL
        AF  +
Subjt:  AFSLL

KAG7031715.1 hypothetical protein SDJN02_05756, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-2770.3Show/hide
Query:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA
        ME + AESRDEAMRSK+A +CA+AA L+SS KS QNR+L A++ E+++E+ERLRK VGDLKIELAMER RN+RIKLCGL+EF LQ +LV+SLSSFF+F+A
Subjt:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA

Query:  F
        F
Subjt:  F

XP_011652624.1 uncharacterized protein LOC105435036 [Cucumis sativus]8.3e-2468.63Show/hide
Query:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV
        ME + AE+++EAMR SK+AI+CA+AA LLSSLKSSQNR L AT+ EQ++E++ L K+VGDLKI+LA ER+RNKRIKLCGL+EF LQ +LVLSLSS F+F 
Subjt:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV

Query:  AF
        AF
Subjt:  AF

XP_022138206.1 uncharacterized protein LOC111009432 [Momordica charantia]1.5e-2568.32Show/hide
Query:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA
        MEK+ AESRDEAMRS++A +CA+AA +LSSLKSSQN  L AT+ E  +E+E+LRK++GDLK+ELA ER+RNKRIKLCGL+EF LQ +LV++LSSFF F+A
Subjt:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA

Query:  F
        F
Subjt:  F

XP_022940284.1 uncharacterized protein LOC111445952 [Cucurbita moschata]1.6e-2772.28Show/hide
Query:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA
        ME + AESRDEAMRSK+A +CA+AA L+SS KS QNR+L A++ EQ++E+ERLRK VGDLKIELAMER RNKRIKLCGL+EF LQ +LV+SLSSFF+F+A
Subjt:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA

Query:  F
        F
Subjt:  F

TrEMBL top hitse value%identityAlignment
A0A0A0LJY1 Uncharacterized protein4.0e-2468.63Show/hide
Query:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV
        ME + AE+++EAMR SK+AI+CA+AA LLSSLKSSQNR L AT+ EQ++E++ L K+VGDLKI+LA ER+RNKRIKLCGL+EF LQ +LVLSLSS F+F 
Subjt:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV

Query:  AF
        AF
Subjt:  AF

A0A5D3E7E0 Putative Retrotransposon-derived protein PEG101.4e-2468.57Show/hide
Query:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV
        ME + AES+DEAMR SK+AI+CA+AA LLSSLKSSQNR L AT  EQ++E + LRK+VGDLKI+LA ER+RNKRIKLCGL+EF LQ +LV+SLSS  +FV
Subjt:  MEKIGAESRDEAMR-SKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFV

Query:  AFSLL
        AF  +
Subjt:  AFSLL

A0A6J1C920 uncharacterized protein LOC1110094327.3e-2668.32Show/hide
Query:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA
        MEK+ AESRDEAMRS++A +CA+AA +LSSLKSSQN  L AT+ E  +E+E+LRK++GDLK+ELA ER+RNKRIKLCGL+EF LQ +LV++LSSFF F+A
Subjt:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA

Query:  F
        F
Subjt:  F

A0A6J1FJM5 uncharacterized protein LOC1114459527.8e-2872.28Show/hide
Query:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA
        ME + AESRDEAMRSK+A +CA+AA L+SS KS QNR+L A++ EQ++E+ERLRK VGDLKIELAMER RNKRIKLCGL+EF LQ +LV+SLSSFF+F+A
Subjt:  MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVA

Query:  F
        F
Subjt:  F

A0A6P5SUI7 uncharacterized protein LOC1107595564.4e-1556.52Show/hide
Query:  EAMRSKSAIQCARAAILLSSLKSSQNRDLIATI-GEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVAF
        EA+RS++AI+CA+AA+LLSSLKSS NR L   I  +   E+E LR+ +GDLK+E+A ER+++KRIKLCG +E  LQ +L+L+LS+FF  +AF
Subjt:  EAMRSKSAIQCARAAILLSSLKSSQNRDLIATI-GEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G78172.1 unknown protein9.5e-1046.67Show/hide
Query:  SRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFV
        S+DE  R  +AI+CARA +LL SL SS+  D   + GE+ QE+   R+ + DL+ +L M +++  RIKLCGL+E  L   LVL LS+FF+
Subjt:  SRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAATCGGGGCGGAATCCAGAGATGAAGCAATGCGATCCAAATCCGCCATTCAATGTGCAAGAGCAGCAATTCTTCTTTCATCGCTCAAATCCTCCCAAAATCG
CGACCTCATAGCCACAATCGGCGAACAATCTCAGGAGGAAGAGAGGCTGAGGAAATCTGTGGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTATGAGGAACAAGAGGA
TCAAGCTCTGCGGTTTGGTGGAATTCGCTCTTCAGTTCATTCTGGTTTTATCTCTTTCCAGCTTCTTCGTCTTTGTTGCTTTCTCACTTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAATCGGGGCGGAATCCAGAGATGAAGCAATGCGATCCAAATCCGCCATTCAATGTGCAAGAGCAGCAATTCTTCTTTCATCGCTCAAATCCTCCCAAAATCG
CGACCTCATAGCCACAATCGGCGAACAATCTCAGGAGGAAGAGAGGCTGAGGAAATCTGTGGGAGATTTGAAGATCGAGTTGGCTATGGAGCGTATGAGGAACAAGAGGA
TCAAGCTCTGCGGTTTGGTGGAATTCGCTCTTCAGTTCATTCTGGTTTTATCTCTTTCCAGCTTCTTCGTCTTTGTTGCTTTCTCACTTCTCTGA
Protein sequenceShow/hide protein sequence
MEKIGAESRDEAMRSKSAIQCARAAILLSSLKSSQNRDLIATIGEQSQEEERLRKSVGDLKIELAMERMRNKRIKLCGLVEFALQFILVLSLSSFFVFVAFSLL