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Sed0013703 (gene) of Chayote v1 genome

Gene IDSed0013703
OrganismSechium edule (Chayote v1)
DescriptionSNF1-related protein kinase regulatory subunit beta-3
Genome locationLG05:39417556..39417984
RNA-Seq ExpressionSed0013703
SyntenySed0013703
Gene Ontology termsGO:0009744 - response to sucrose (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0043562 - cellular response to nitrogen levels (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR006828 - Association with the SNF1 complex (ASC) domain
IPR030067 - SNF1-related protein kinase regulatory subunit beta-3
IPR037256 - ASC domain superfamily
IPR043554 - SNF1-related protein kinase regulatory subunit beta


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145755.1 SNF1-related protein kinase regulatory subunit beta-3 [Cucumis sativus]9.2e-5693.16Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN  SEDSDQTTVVGFEVPKSPDS+YNN+Y+GSEDEARDPPLVPPHLQHTLL  PASRDAGETLPLPQN ILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

XP_022140750.1 SNF1-related protein kinase regulatory subunit beta-3 [Momordica charantia]2.5e-5388.89Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNP SEDSDQTTVVGFEVP SPDS+YNN+YLGSEDEARDPP  PPHLQHTLL HPASRDAG TLPLP N ILNHL+IENRETPRSVVALGFTHRF SK+
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

XP_022958406.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita moschata]1.3e-5492.17Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNP  EDSDQTTVVGFEVPKSPDS+YNNVYLGSED+ARDPP VPPHLQHTLL HPASRDAG TLPLPQN +LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

XP_022996167.1 SNF1-related protein kinase regulatory subunit beta-3-like [Cucurbita maxima]3.9e-5491.3Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNP  EDSDQTTVVGFEVPKSPDS+YNNVYLGSED+ARDPP VPPHLQHTLL HPA RDAG TLPLPQN +LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

XP_038902942.1 SNF1-related protein kinase regulatory subunit beta-3 [Benincasa hispida]1.4e-5694.02Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN CSEDSDQ TVVGFEVPKSPDS+YNNVY+GSEDEARDPPLVPPHLQHTLL  PASRDAGETLPLPQN ILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

TrEMBL top hitse value%identityAlignment
A0A0A0KBG3 AMPKBI domain-containing protein4.5e-5693.16Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN  SEDSDQTTVVGFEVPKSPDS+YNN+Y+GSEDEARDPPLVPPHLQHTLL  PASRDAGETLPLPQN ILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A1S3CP39 SNF1-related protein kinase regulatory subunit beta-34.5e-5693.16Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN  SEDSDQTTVVGFEVPKSPDS+YNN+Y+GSEDEARDPPLVPPHLQHTLL  PASRDAGETLPLPQN ILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A5A7T1A3 SNF1-related protein kinase regulatory subunit beta-3 isoform X24.5e-5693.16Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNN  SEDSDQTTVVGFEVPKSPDS+YNN+Y+GSEDEARDPPLVPPHLQHTLL  PASRDAGETLPLPQN ILNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSSRA
        VTVVLYKPVHRRGSSRA
Subjt:  VTVVLYKPVHRRGSSRA

A0A6J1H1Z8 SNF1-related protein kinase regulatory subunit beta-3-like6.5e-5592.17Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNP  EDSDQTTVVGFEVPKSPDS+YNNVYLGSED+ARDPP VPPHLQHTLL HPASRDAG TLPLPQN +LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

A0A6J1KA31 SNF1-related protein kinase regulatory subunit beta-3-like1.9e-5491.3Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MNNP  EDSDQTTVVGFEVPKSPDS+YNNVYLGSED+ARDPP VPPHLQHTLL HPA RDAG TLPLPQN +LNHLFIENRETPRSVVALGFTHRFHSKY
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVVLYKPVHRRGSS
Subjt:  VTVVLYKPVHRRGSS

SwissProt top hitse value%identityAlignment
O43741 5'-AMP-activated protein kinase subunit beta-22.6e-0834.74Show/hide
Query:  EVPKSPDSSYNNVYLG--SEDEARDPPLVPPHLQHTLLGHPASRDAGET-LPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV
        ++  SP   Y        SE+  + PP++PPHL   +L    +       LP P + +LNHL+  + +   SV+ L  THR+  KYVT +LYKP+
Subjt:  EVPKSPDSSYNNVYLG--SEDEARDPPLVPPHLQHTLLGHPASRDAGET-LPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV

Q84VQ1 SNF1-related protein kinase regulatory subunit beta-17.7e-2151.52Show/hide
Query:  TVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR
        ++V FE P SPD SY      +ED A++P  VPP L  TLLG   + +       PQ+ +LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Subjt:  TVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR

Q9QZH4 5'-AMP-activated protein kinase subunit beta-26.7e-0935.79Show/hide
Query:  EVPKSPDSSYNN--VYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGET-LPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV
        ++  SP   Y        SE+  + PP++PPHL   +L    +       LP P + +LNHL+     T  SV+ L  THR+  KYVT +LYKP+
Subjt:  EVPKSPDSSYNN--VYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGET-LPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPV

Q9SCY5 SNF1-related protein kinase regulatory subunit beta-22.3e-2555.34Show/hide
Query:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP++SY+N+ LG+ED +++PP+VPPHLQ TLL  PA+  D    LP PQ+ ILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

Q9ZUU8 SNF1-related protein kinase regulatory subunit beta-32.6e-3766.09Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MN+   +D + TTVVGFEVP SP SSYNNVY  +EDE RDPP VPPHLQH+LLG+  S    E    PQN +LNHL+IENR+ PRSVVALGF+HRF +K+
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVV+YKPV RRGS+
Subjt:  VTVVLYKPVHRRGSS

Arabidopsis top hitse value%identityAlignment
AT2G28060.1 5'-AMP-activated protein kinase beta-2 subunit protein1.9e-3866.09Show/hide
Query:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY
        MN+   +D + TTVVGFEVP SP SSYNNVY  +EDE RDPP VPPHLQH+LLG+  S    E    PQN +LNHL+IENR+ PRSVVALGF+HRF +K+
Subjt:  MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKY

Query:  VTVVLYKPVHRRGSS
        VTVV+YKPV RRGS+
Subjt:  VTVVLYKPVHRRGSS

AT4G16360.1 5'-AMP-activated protein kinase beta-2 subunit protein1.6e-2655.34Show/hide
Query:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP++SY+N+ LG+ED +++PP+VPPHLQ TLL  PA+  D    LP PQ+ ILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT4G16360.2 5'-AMP-activated protein kinase beta-2 subunit protein1.6e-2655.34Show/hide
Query:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP++SY+N+ LG+ED +++PP+VPPHLQ TLL  PA+  D    LP PQ+ ILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT4G16360.3 5'-AMP-activated protein kinase beta-2 subunit protein1.6e-2655.34Show/hide
Query:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP
        D  ++ GFE P+SP++SY+N+ LG+ED +++PP+VPPHLQ TLL  PA+  D    LP PQ+ ILNHL+++  ++  SVVALG THRF +KYVTVVLYK 
Subjt:  DQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASR-DAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKP

Query:  VHR
        + R
Subjt:  VHR

AT5G21170.1 5'-AMP-activated protein kinase beta-2 subunit protein5.5e-2251.52Show/hide
Query:  TVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR
        ++V FE P SPD SY      +ED A++P  VPP L  TLLG   + +       PQ+ +LNH+FIE   TP+S+VALG THRF SKY+TVVLYKP+ R
Subjt:  TVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVHR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAACCCTTGCTCTGAAGATAGCGATCAGACCACCGTAGTGGGTTTTGAAGTTCCAAAGTCACCGGATTCATCCTACAACAATGTATACCTTGGGAGCGAAGACGA
GGCACGCGATCCACCACTTGTCCCACCTCATTTGCAGCACACCTTACTCGGCCACCCTGCAAGCAGAGATGCTGGTGAAACTCTTCCATTGCCACAGAATGCGATTCTCA
ACCATCTCTTTATCGAAAACCGGGAGACTCCACGATCCGTTGTGGCTCTTGGATTCACACATCGTTTTCATTCGAAATATGTCACAGTCGTGCTTTACAAACCGGTTCAT
AGAAGAGGGAGTAGCAGGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAACCCTTGCTCTGAAGATAGCGATCAGACCACCGTAGTGGGTTTTGAAGTTCCAAAGTCACCGGATTCATCCTACAACAATGTATACCTTGGGAGCGAAGACGA
GGCACGCGATCCACCACTTGTCCCACCTCATTTGCAGCACACCTTACTCGGCCACCCTGCAAGCAGAGATGCTGGTGAAACTCTTCCATTGCCACAGAATGCGATTCTCA
ACCATCTCTTTATCGAAAACCGGGAGACTCCACGATCCGTTGTGGCTCTTGGATTCACACATCGTTTTCATTCGAAATATGTCACAGTCGTGCTTTACAAACCGGTTCAT
AGAAGAGGGAGTAGCAGGGCTTAG
Protein sequenceShow/hide protein sequence
MNNPCSEDSDQTTVVGFEVPKSPDSSYNNVYLGSEDEARDPPLVPPHLQHTLLGHPASRDAGETLPLPQNAILNHLFIENRETPRSVVALGFTHRFHSKYVTVVLYKPVH
RRGSSRA