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Sed0013707 (gene) of Chayote v1 genome

Gene IDSed0013707
OrganismSechium edule (Chayote v1)
Description60S acidic ribosomal protein P1-like
Genome locationLG13:197488..198988
RNA-Seq ExpressionSed0013707
SyntenySed0013707
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574265.1 60S acidic ribosomal protein P1-1, partial [Cucurbita argyrosperma subsp. sororia]1.7e-4393.64Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES
        MSTSELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAA V+VAAPAGG A AAAPA EEKKEEPKEES
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

XP_022140845.1 60S acidic ribosomal protein P1-like [Momordica charantia]1.3e-4391.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA--AAAPAAEEKKEEPKEE
        MSTSELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWP+LFAKLAEKR+IGDLLLNVGCGGGAAAPV+VAAPAGG A  AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA--AAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_022945965.1 60S acidic ribosomal protein P1-like [Cucurbita moschata]1.7e-4393.64Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES
        MSTSELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAA V+VAAPAGG A AAAPA EEKKEEPKEES
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

XP_022984373.1 60S acidic ribosomal protein P1 [Cucurbita maxima]6.4e-4391.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE
        MS SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAAPV+VAA AGG   +AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

XP_023551718.1 60S acidic ribosomal protein P1 [Cucurbita pepo subsp. pepo]3.8e-4391.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE
        MS+SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAAPV+VAA AGG   +AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A6J1CGB2 60S acidic ribosomal protein P1-like6.2e-4491.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA--AAAPAAEEKKEEPKEE
        MSTSELACAYAA+ALYDDGIAITA+KIAAVVAAAGLCVESYWP+LFAKLAEKR+IGDLLLNVGCGGGAAAPV+VAAPAGG A  AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA--AAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1E4K8 60S acidic ribosomal protein P19.0e-4390.99Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE
        MS+SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAAPV+VAA A G   +AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

A0A6J1G2H4 60S acidic ribosomal protein P1-like8.2e-4493.64Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES
        MSTSELACAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAA V+VAAPAGG A AAAPA EEKKEEPKEES
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

A0A6J1HYH2 60S acidic ribosomal protein P1-like6.9e-4391.82Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES
        MSTSEL CAYAALAL+DDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAA V+VAAPAGG A AAAPA EEK+EEPKEES
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGA-AAAPAAEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

A0A6J1JAB2 60S acidic ribosomal protein P13.1e-4391.89Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE
        MS SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWP+LFAKLAEKRDIGDLLLNVGCGGGAAAPV+VAA AGG   +AAAPA EEKKEEPKEE
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG--GAAAAPAAEEKKEEPKEE

Query:  SDDDMGFSLFD
        SDDDMGFSLFD
Subjt:  SDDDMGFSLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-26.5e-3067.26Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGC-GGGAAAPVAVAAP--AGGGAAAAPAAEEKKEEPK
        MST  ELAC+YA + L D+GIAIT+DKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG  GGG  APV+ AAP  AGG AAAAPA EEKK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGC-GGGAAAPVAVAAP--AGGGAAAAPAAEEKKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

P29763 60S acidic ribosomal protein P12.8e-2561.47Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGAAAAPAAEEKKEEPKEESD
        MSTSELAC YAAL L+DDG+ ITAD I  +  AAG+ VE YWP LFAKL  K+ + DL+ NVG GGGAA   A AAPA GGA AA AA +K+E+ +   +
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGAAAAPAAEEKKEEPKEESD

Query:  DDMGFSLFD
        +DMGFSLFD
Subjt:  DDMGFSLFD

P52855 60S acidic ribosomal protein P11.6e-3375.45Show/hide
Query:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG-GAAAAPAAEEKKEEPKEES
        M++ ELAC YAAL L DDGIAITA+KIA +V AA + VESYWP LFAKL EKR++ DL+L+VG GGG AAPVA AAPAGG  AAAAPA EEKKEE KEES
Subjt:  MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGG-GAAAAPAAEEKKEEPKEES

Query:  DDDMGFSLFD
        DDDMGFSLFD
Subjt:  DDDMGFSLFD

Q8LCW9 60S acidic ribosomal protein P1-12.4e-3271.43Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAP AGGGAAAAPAAEE KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

Q8LEQ0 60S acidic ribosomal protein P1-31.5e-3169.91Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAPA  GG AAAAPAAEE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.7e-3371.43Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAP AGGGAAAAPAAEE KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.2 60S acidic ribosomal protein family1.7e-3371.43Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAP AGGGAAAAPAAEE KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT1G01100.4 60S acidic ribosomal protein family1.7e-3371.43Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAP AGGGAAAAPAAEE KK+EP E
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAP-AGGGAAAAPAAEE-KKEEPKE

Query:  ESDDDMGFSLFD
        ESD D+GF LFD
Subjt:  ESDDDMGFSLFD

AT5G47700.1 60S acidic ribosomal protein family1.1e-3269.91Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAPA  GG AAAAPAAEE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD

AT5G47700.2 60S acidic ribosomal protein family1.1e-3269.91Show/hide
Query:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK
        MST  ELAC+YA + L D+GIAITADKIA +V AAG+ +ESYWP LFAK+AEKR++ DL++NVG GGG  APVA AAPA  GG AAAAPAAEE KK+EP 
Subjt:  MST-SELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPA--GGGAAAAPAAEE-KKEEPK

Query:  EESDDDMGFSLFD
        EESD D+GF LFD
Subjt:  EESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACCAGTGAGCTTGCCTGCGCCTACGCCGCCCTCGCTCTTTACGACGATGGGATTGCAATCACGGCGGACAAGATTGCAGCCGTAGTCGCCGCTGCAGGACTCTG
TGTGGAATCATACTGGCCCACCCTGTTTGCTAAGCTAGCCGAGAAGAGAGATATTGGTGACCTTCTTTTGAACGTTGGCTGTGGTGGCGGCGCTGCGGCTCCCGTGGCTG
TAGCTGCTCCCGCTGGTGGTGGTGCTGCTGCCGCTCCGGCCGCCGAGGAAAAGAAGGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGATTAG
mRNA sequenceShow/hide mRNA sequence
GTGATCGCCGCACGCGCATTTGGCTCCAACTAATCTCTGGATTCTCAGTGCATATCAGGCGCTACGTTAACCATGTCTACCAGTGAGCTTGCCTGCGCCTACGCCGCCCT
CGCTCTTTACGACGATGGGATTGCAATCACGGCGGACAAGATTGCAGCCGTAGTCGCCGCTGCAGGACTCTGTGTGGAATCATACTGGCCCACCCTGTTTGCTAAGCTAG
CCGAGAAGAGAGATATTGGTGACCTTCTTTTGAACGTTGGCTGTGGTGGCGGCGCTGCGGCTCCCGTGGCTGTAGCTGCTCCCGCTGGTGGTGGTGCTGCTGCCGCTCCG
GCCGCCGAGGAAAAGAAGGAGGAGCCAAAGGAAGAGAGCGATGACGACATGGGATTCAGCTTATTCGATTAGGAGGCTTTTTTGTTGTTGTGTTATGGGGGATTGTATTA
GAAAGTTTTTGGATGGTAGCTTAATTGGCTTTATCTTTATTTTATATATGTTGAATTGTCTCATGTTTTTTTTACCATGGAGCTGCTAGATCTTTTAAGCCTTTAATTTA
CAATGGAAAATGCATCTTTTCAATTTATTTGTTCTTGGCAATGAAATATATGGACGTGCAATGATTTTATTAAGTTCTTCATGTCATCTATCGGCAGGAAATTTAGTTGT
AAAAGGCTATCAAATTGATGCGGATGTCAATGGTATTGGATGCAATGTTATGGATATGTGAGGAAATTAATTGTTAGTTTTGATTTTCATCAAGCTGTAGGTTAAGGAGA
TAATGAATGTATAATCTTTCATGGGGGAAGATACATGACAGTGGG
Protein sequenceShow/hide protein sequence
MSTSELACAYAALALYDDGIAITADKIAAVVAAAGLCVESYWPTLFAKLAEKRDIGDLLLNVGCGGGAAAPVAVAAPAGGGAAAAPAAEEKKEEPKEESDDDMGFSLFD