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Sed0013731 (gene) of Chayote v1 genome

Gene IDSed0013731
OrganismSechium edule (Chayote v1)
DescriptionVQ domain-containing protein
Genome locationLG04:3898705..3899503
RNA-Seq ExpressionSed0013731
SyntenySed0013731
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039609 - VQ motif-containing protein 15/22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608078.1 hypothetical protein SDJN03_01420, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3441.14Show/hide
Query:  MDSGSGSLQSSSAGDEDYESH---------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN-------------
        MDSGSGSLQSSS GD+DY+SH                L P  PPPLFFN  I    HQ L  HL  HNFQN         L P NFN             
Subjt:  MDSGSGSLQSSSAGDEDYESH---------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN-------------

Query:  -PNPTSLRSTP-------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------
         PNPTSLRS P                         NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA           
Subjt:  -PNPTSLRSTP-------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------

Query:  ---------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDEL--
                                               S NNN NNV+M+DQ  S +Q   IF  QS+S+   L+ PH+        LL+ALQNDE   
Subjt:  ---------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDEL--

Query:  --------------TSNNCKLKFKGCSSSRDKI
                      T+ NCKLKF G SSS + +
Subjt:  --------------TSNNCKLKFKGCSSSRDKI

KAG7031711.1 hypothetical protein SDJN02_05752, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-3441.21Show/hide
Query:  MDSGSGSLQSSSAGDEDYESH------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------PN
        MDSGSGSLQSSS GD+DY+SH             L P  PPPLFFN  I    HQ L  HL  HNFQN         L P NFN              PN
Subjt:  MDSGSGSLQSSSAGDEDYESH------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------PN

Query:  PTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------
        PTSLRS P                            NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA           
Subjt:  PTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------

Query:  ---------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDEL--
                                               S NNN NNV+++DQ  S +Q   IF  QS+S+   L+ PH+        LL+ALQNDE   
Subjt:  ---------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDEL--

Query:  -----------TSNNCKLKFKGCSSSRDKI
                   T+ NCKLKF G SSS + +
Subjt:  -----------TSNNCKLKFKGCSSSRDKI

XP_022940282.1 mucin-5AC-like [Cucurbita moschata]1.8e-3239.94Show/hide
Query:  MDSGSGSLQSSSAGDEDYESH------------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN----------
        MDSGSGSLQSSS GD+DY+SH                   L P  PPPLFFN  I    HQ L  HL  HNFQN         L P NFN          
Subjt:  MDSGSGSLQSSSAGDEDYESH------------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN----------

Query:  ----PNPTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----
            PNPTSLRS P                            NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA     
Subjt:  ----PNPTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----

Query:  --------------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQN
                                                    S  NN NNV+++DQ  S +Q   IF  QS+S+   L+ PH+        LL+ALQN
Subjt:  --------------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQN

Query:  DEL----------------TSNNCKLKFKGCSSSRDKI
        DE                 T+ NCKLKF G SSS + +
Subjt:  DEL----------------TSNNCKLKFKGCSSSRDKI

XP_022975920.1 uncharacterized protein LOC111476479 [Cucurbita maxima]5.6e-2646.89Show/hide
Query:  MDSGSGSLQSSSAGDEDYESHRLL--PHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPN------PTSLRSTPNP--------LHPKPATTKKR
        MDSGS SLQSSS GDEDY+SH+    P  PPPLFFN   +Q  L    P ++F +      FNP+      P +   T N         LHPK ATTKKR
Subjt:  MDSGSGSLQSSSAGDEDYESHRLL--PHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPN------PTSLRSTPNP--------LHPKPATTKKR

Query:  TRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA---SYNNNYNNVSMEDQRASN------------LQRIFPLQSVSDIRLDSPH---VPLLTA--L
        TRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA   SY+  ++  ++    +S               R+   Q+     LD+PH    PLL +  L
Subjt:  TRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA---SYNNNYNNVSMEDQRASN------------LQRIFPLQSVSDIRLDSPH---VPLLTA--L

Query:  QNDELTSNN
        QNDE   +N
Subjt:  QNDELTSNN

XP_022981016.1 mucin-5AC-like [Cucurbita maxima]8.6e-3541.02Show/hide
Query:  MDSGSGSLQSSSAGDEDYESHR----------------LLPHAPPPLFFNTIIHQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------
        MDSGSGSLQSSS GD+DY+SHR                L P  PPPLFFN  +  HQ L  HL HHNFQN         L P NFN              
Subjt:  MDSGSGSLQSSSAGDEDYESHR----------------LLPHAPPPLFFNTIIHQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------

Query:  PNPTSLRSTP--------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------
        PNPTSLRS P                          NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA           
Subjt:  PNPTSLRSTP--------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------

Query:  --------------------------------------SYNN-NYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDE---
                                              S NN N NNV+++DQ  S +Q   IF  QSVS+   L+ P +        LL+ALQNDE   
Subjt:  --------------------------------------SYNN-NYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDE---

Query:  --------------LTSNNCKLKFKGCSSSRDKI
                       T+ NCKLKF G SSS + +
Subjt:  --------------LTSNNCKLKFKGCSSSRDKI

TrEMBL top hitse value%identityAlignment
A0A0A0LJY7 VQ domain-containing protein7.2e-1943.28Show/hide
Query:  MDSGSGSLQSSSAGDEDYESHR----LLPHAPPPLFFN------------TIIHQHQLHSHLPH--------HNFQN--PLLPP----------NFNPNP
        MDSGSGSLQSSS GDE+Y+SH      L   P PLFFN            + +      S +PH        HN+QN   LLP           NFNP+ 
Subjt:  MDSGSGSLQSSSAGDEDYESHR----LLPHAPPPLFFN------------TIIHQHQLHSHLPH--------HNFQN--PLLPP----------NFNPNP

Query:  TS-------------------------------LRSTPN----PLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFT---ASYNNNY
        +S                               +RSTP+     LHPK   TKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFT   +SY+  +
Subjt:  TS-------------------------------LRSTPN----PLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFT---ASYNNNY

Query:  N
        +
Subjt:  N

A0A5A7P2A1 VQ motif-containing protein2.7e-1848.37Show/hide
Query:  MDSG--SGSLQSSSAGDEDYESHRL-----------------LPHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLL----------PPNFNPNPTSLRST-
        MDSG  SGSLQSSS GDE+Y+S                    +P+ PPP FF+ + +  QL     HHN   PLL          PP  +P P    ST 
Subjt:  MDSG--SGSLQSSSAGDEDYESHRL-----------------LPHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLL----------PPNFNPNPTSLRST-

Query:  -----PNPLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPF
             PNP    P   KKR+RASRRAPTT+LTTDT+NFRAMVQEFTGIP+PPF
Subjt:  -----PNPLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPF

A0A6J1FJ60 mucin-5AC-like8.7e-3339.94Show/hide
Query:  MDSGSGSLQSSSAGDEDYESH------------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN----------
        MDSGSGSLQSSS GD+DY+SH                   L P  PPPLFFN  I    HQ L  HL  HNFQN         L P NFN          
Subjt:  MDSGSGSLQSSSAGDEDYESH------------------RLLPHAPPPLFFNTII--HQHQ-LHSHLPHHNFQN--------PLLPPNFN----------

Query:  ----PNPTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----
            PNPTSLRS P                            NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA     
Subjt:  ----PNPTSLRSTP----------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----

Query:  --------------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQN
                                                    S  NN NNV+++DQ  S +Q   IF  QS+S+   L+ PH+        LL+ALQN
Subjt:  --------------------------------------------SYNNNYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQN

Query:  DEL----------------TSNNCKLKFKGCSSSRDKI
        DE                 T+ NCKLKF G SSS + +
Subjt:  DEL----------------TSNNCKLKFKGCSSSRDKI

A0A6J1II30 uncharacterized protein LOC1114764792.7e-2646.89Show/hide
Query:  MDSGSGSLQSSSAGDEDYESHRLL--PHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPN------PTSLRSTPNP--------LHPKPATTKKR
        MDSGS SLQSSS GDEDY+SH+    P  PPPLFFN   +Q  L    P ++F +      FNP+      P +   T N         LHPK ATTKKR
Subjt:  MDSGSGSLQSSSAGDEDYESHRLL--PHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPN------PTSLRSTPNP--------LHPKPATTKKR

Query:  TRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA---SYNNNYNNVSMEDQRASN------------LQRIFPLQSVSDIRLDSPH---VPLLTA--L
        TRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA   SY+  ++  ++    +S               R+   Q+     LD+PH    PLL +  L
Subjt:  TRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA---SYNNNYNNVSMEDQRASN------------LQRIFPLQSVSDIRLDSPH---VPLLTA--L

Query:  QNDELTSNN
        QNDE   +N
Subjt:  QNDELTSNN

A0A6J1IVA8 mucin-5AC-like4.2e-3541.02Show/hide
Query:  MDSGSGSLQSSSAGDEDYESHR----------------LLPHAPPPLFFNTIIHQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------
        MDSGSGSLQSSS GD+DY+SHR                L P  PPPLFFN  +  HQ L  HL HHNFQN         L P NFN              
Subjt:  MDSGSGSLQSSSAGDEDYESHR----------------LLPHAPPPLFFNTIIHQHQ-LHSHLPHHNFQN--------PLLPPNFN--------------

Query:  PNPTSLRSTP--------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------
        PNPTSLRS P                          NP    LHPKP TTKKRTRASRRAPTT+LTTDT+NFRAMVQEFTGIPSPPFTA           
Subjt:  PNPTSLRSTP--------------------------NP----LHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTA-----------

Query:  --------------------------------------SYNN-NYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDE---
                                              S NN N NNV+++DQ  S +Q   IF  QSVS+   L+ P +        LL+ALQNDE   
Subjt:  --------------------------------------SYNN-NYNNVSMEDQRASNLQ--RIFPLQSVSD-IRLDSPHV-------PLLTALQNDE---

Query:  --------------LTSNNCKLKFKGCSSSRDKI
                       T+ NCKLKF G SSS + +
Subjt:  --------------LTSNNCKLKFKGCSSSRDKI

SwissProt top hitse value%identityAlignment
Q9LIE6 VQ motif-containing protein 227.9e-0742.7Show/hide
Query:  TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN--YNNVSMEDQRA-SNLQRIFPLQSVSDIRLDSPHVPLLTALQN
        T++R+RASRR PTT+L TDTSNFRAMVQ++TG PS     S N    ++  S  D  A S+ Q  +         L  P  P + +L N
Subjt:  TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN--YNNVSMEDQRA-SNLQRIFPLQSVSDIRLDSPHVPLLTALQN

Arabidopsis top hitse value%identityAlignment
AT1G35830.1 VQ motif-containing protein2.0e-1342.25Show/hide
Query:  MDS-GSGSLQSSS--------AGDEDYESHRLLPHAPPP----LFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPNPTSLRSTPNPLHPKPATT-----K
        MDS  SGSLQSSS           +D+ S  L P  PPP     + +         S   + NF N L+  +       L   P P  P P  +     +
Subjt:  MDS-GSGSLQSSS--------AGDEDYESHRLLPHAPPP----LFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPNPTSLRSTPNPLHPKPATT-----K

Query:  KRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNN
        KRTRASRRAPTT+LTTDTSNFRAMVQEFTG+P+ PF+  +++
Subjt:  KRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNN

AT3G22160.1 VQ motif-containing protein5.6e-0842.7Show/hide
Query:  TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN--YNNVSMEDQRA-SNLQRIFPLQSVSDIRLDSPHVPLLTALQN
        T++R+RASRR PTT+L TDTSNFRAMVQ++TG PS     S N    ++  S  D  A S+ Q  +         L  P  P + +L N
Subjt:  TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN--YNNVSMEDQRA-SNLQRIFPLQSVSDIRLDSPHVPLLTALQN

AT4G15120.1 VQ motif-containing protein2.1e-0756.14Show/hide
Query:  TSLRSTPNPLHP------KPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPS
        T+  S  +PL P      KP  T++R+RASRR PTT+  TDT+NFRAMVQ+FTG PS
Subjt:  TSLRSTPNPLHP------KPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPS

AT4G39720.1 VQ motif-containing protein2.8e-1545.28Show/hide
Query:  MDSG-SGSLQSSS----AGDEDYESHRLLPHAPPPLF------FNTIIHQHQLHSHLPH--HNFQNPLLPPNFNPNPTSL--RSTPNP-----LHPKPAT
        M+SG S S+QSSS     G+E+Y+S R    +    F       ++I    Q H +L H  HN  N L+PPN+  N T L     P+P     L    AT
Subjt:  MDSG-SGSLQSSS----AGDEDYESHRLLPHAPPPLF------FNTIIHQHQLHSHLPH--HNFQNPLLPPNFNPNPTSL--RSTPNP-----LHPKPAT

Query:  --------------TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN
                      TKKR+RASRRAPTT+LTTDTSNFRAMVQEFTGIP+PP    +NNN
Subjt:  --------------TKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFTASYNNN

AT5G65170.1 VQ motif-containing protein1.1e-1138.57Show/hide
Query:  PPPLFFNTIIHQHQLHSHL---PHHNFQNPLLP-PNFNPNPTSLRSTPNPLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFT---A
        PPP+    +   + L  +L   P+ N  +P+   P    N   L +T NP        KKR+R SRRAPTT+LTTDTSNFRAMVQEFTG PS PFT   +
Subjt:  PPPLFFNTIIHQHQLHSHL---PHHNFQNPLLP-PNFNPNPTSLRSTPNPLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEFTGIPSPPFT---A

Query:  SY-NNNYNNVSMEDQRASNLQRIFPLQSVSDIRLDSPHVP
        S+  + ++        +S   + FP + +S   L+  ++P
Subjt:  SY-NNNYNNVSMEDQRASNLQRIFPLQSVSDIRLDSPHVP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCGGCAGCGGAAGCTTGCAATCTTCGAGTGCCGGCGACGAAGACTACGAGTCTCATCGTCTTTTACCCCACGCGCCGCCGCCACTTTTCTTCAACACCATCAT
TCATCAACACCAATTACACTCTCATCTTCCACACCATAACTTCCAAAACCCCCTCCTCCCCCCTAACTTCAATCCCAATCCCACATCGTTAAGATCTACCCCAAACCCTT
TACATCCCAAACCGGCCACCACGAAGAAACGAACCCGAGCTTCACGCCGAGCCCCGACCACCATTCTCACAACAGACACGTCTAATTTCCGAGCAATGGTTCAAGAGTTC
ACCGGCATCCCCTCCCCGCCGTTCACCGCTTCCTACAACAACAACTATAATAATGTTTCAATGGAGGATCAAAGGGCGTCCAACTTGCAACGGATTTTTCCGTTACAGTC
TGTGTCAGATATCCGTTTAGATTCGCCTCACGTTCCGTTACTGACAGCTTTGCAAAATGATGAACTAACGTCCAATAACTGTAAGTTGAAATTTAAGGGTTGTTCTTCTT
CGCGAGATAAGATTGGTGAATATTGGTGA
mRNA sequenceShow/hide mRNA sequence
CAAAACACCCGTGTTATTATGATCAAATTTTCCTTCTATTTAGAGGCTCCCCAATGAACCCTTTTAAGATTTTTATTCCATTAAAAAGCTGATTTCAAAGCTACCCTCTT
TCTTTTATCACACAAGAGATTCCTATCATGGATTCCGGCAGCGGAAGCTTGCAATCTTCGAGTGCCGGCGACGAAGACTACGAGTCTCATCGTCTTTTACCCCACGCGCC
GCCGCCACTTTTCTTCAACACCATCATTCATCAACACCAATTACACTCTCATCTTCCACACCATAACTTCCAAAACCCCCTCCTCCCCCCTAACTTCAATCCCAATCCCA
CATCGTTAAGATCTACCCCAAACCCTTTACATCCCAAACCGGCCACCACGAAGAAACGAACCCGAGCTTCACGCCGAGCCCCGACCACCATTCTCACAACAGACACGTCT
AATTTCCGAGCAATGGTTCAAGAGTTCACCGGCATCCCCTCCCCGCCGTTCACCGCTTCCTACAACAACAACTATAATAATGTTTCAATGGAGGATCAAAGGGCGTCCAA
CTTGCAACGGATTTTTCCGTTACAGTCTGTGTCAGATATCCGTTTAGATTCGCCTCACGTTCCGTTACTGACAGCTTTGCAAAATGATGAACTAACGTCCAATAACTGTA
AGTTGAAATTTAAGGGTTGTTCTTCTTCGCGAGATAAGATTGGTGAATATTGGTGAATTAGCACATTTTTGTGTTTGCCCTCAACCATCTATATATGATCAAATCTGAGC
CGTTGATTTTATTTTTAATTTGAAGGAAT
Protein sequenceShow/hide protein sequence
MDSGSGSLQSSSAGDEDYESHRLLPHAPPPLFFNTIIHQHQLHSHLPHHNFQNPLLPPNFNPNPTSLRSTPNPLHPKPATTKKRTRASRRAPTTILTTDTSNFRAMVQEF
TGIPSPPFTASYNNNYNNVSMEDQRASNLQRIFPLQSVSDIRLDSPHVPLLTALQNDELTSNNCKLKFKGCSSSRDKIGEYW