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Sed0013744 (gene) of Chayote v1 genome

Gene IDSed0013744
OrganismSechium edule (Chayote v1)
Descriptionprotein NIM1-INTERACTING 1
Genome locationLG07:4752675..4753224
RNA-Seq ExpressionSed0013744
SyntenySed0013744
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593261.1 hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]8.6e-2962.86Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP
        MEKQSL+    RV  A+AAVDGEEEEE MK+E FFALVRNFKEMRD+RRKELMIG     AAA AE +++K++TV+N S WIPRFE+EDFDE+FQVRGP 
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP

Query:  LVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL
                  +EA A A   AKKK   K+EED LDLNL+L
Subjt:  LVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL

KAG7025612.1 hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-2962.41Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDG-EEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGP
        MEKQSL+    RV  A+AAVDG EEEEE+MK+E FFALVRNFKEMRD+RRKELMIG     AAA AE +++K++TV+N S WIPRFE+EDFDE+FQVRGP
Subjt:  MEKQSLQPPRDRVAAAAAAVDG-EEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGP

Query:  PLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL
                   +EA A A   AKKK   K+EED LDLNL+L
Subjt:  PLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL

XP_022960173.1 protein NIM1-INTERACTING 1 [Cucurbita moschata]3.5e-3064.08Show/hide
Query:  MEKQSLQPPRDRV--AAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG
        MEKQSL+    RV  AAAAAAVDGEEEEE MK+E FFALVRNFKEMRD+RRKELMIG +   AAA AE +++K++TV+N S WIPRFE+EDFDE+FQVRG
Subjt:  MEKQSLQPPRDRV--AAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG

Query:  PPLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL
        P           +EA A A   AKKK   K+EED LDLNL+L
Subjt:  PPLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL

XP_023514605.1 protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]3.2e-3162.77Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP
        MEKQSL+P   RV  A AAVDGEEEEE+MK+E FFALVRNFKEMRD+RRKELMIG +   AAA AE +++K++TV+N S WIPRFE+EDFDE+FQ+RGP 
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP

Query:  LVLPKPINLVKEATATATTAAKKKKSEEDFLDLNLTL
                  KE  A A    KK K+EED LDLNL+L
Subjt:  LVLPKPINLVKEATATATTAAKKKKSEEDFLDLNLTL

XP_038898983.1 protein NIM1-INTERACTING 1-like [Benincasa hispida]5.6e-2858.9Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKK--VETVQNPSTWIPRFEKEDFDEDFQVRG
        ME + LQP  +R+A         EEEE+ ++E FFALVRNFKEMRDRRRKELMIGEE   AA    +KR K   E V+N STWIP+FE+EDFDE+FQVRG
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKK--VETVQNPSTWIPRFEKEDFDEDFQVRG

Query:  PPLVLP-KPINLVKEAT--ATATTAAKKKKSE----EDFLDLNLTL
           +LP KP NLVKE T  A A+TAA KKK      +D LDLNL L
Subjt:  PPLVLP-KPINLVKEAT--ATATTAAKKKKSE----EDFLDLNLTL

TrEMBL top hitse value%identityAlignment
A0A0A0K5V7 Uncharacterized protein1.1e-1647.65Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIG-EEAAAAAATAEKKRKKV---ETVQNPSTWIPRFEKEDFDEDFQV
        ME   LQP  D  A        E+  ED ++E FFALVR+ KEMRD+RRKEL IG EE     A  EK+RK++   E V+N STWIP+FE+EDFDE+FQ 
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIG-EEAAAAAATAEKKRKKV---ETVQNPSTWIPRFEKEDFDEDFQV

Query:  RGPPLVLPKP-INLVKEATATATTAA-------KKKKSEEDFLDLNLTL
             + P P  NLVK  T  A+T         KK K+ +  LDLNL L
Subjt:  RGPPLVLPKP-INLVKEATATATTAA-------KKKKSEEDFLDLNLTL

A0A6J1DAZ5 protein NIM1-INTERACTING 12.5e-2657.64Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKEL--MIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG
        ME ++L+P        AAA   EEEEE+MK+E FFAL+RNFKEMRDRRRKEL  MIG+         EKKRKK++T   PSTWIP F +EDFDEDFQVRG
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKEL--MIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG

Query:  PPLVLPKPINLVKEAT-----ATATTAAKKKKSEEDFLDLNLTL
        PP VLPKP NL+KE T       A    K  K++E+ LDLNL L
Subjt:  PPLVLPKPINLVKEAT-----ATATTAAKKKKSEEDFLDLNLTL

A0A6J1H831 protein NIM1-INTERACTING 11.7e-3064.08Show/hide
Query:  MEKQSLQPPRDRV--AAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG
        MEKQSL+    RV  AAAAAAVDGEEEEE MK+E FFALVRNFKEMRD+RRKELMIG +   AAA AE +++K++TV+N S WIPRFE+EDFDE+FQVRG
Subjt:  MEKQSLQPPRDRV--AAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRG

Query:  PPLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL
        P           +EA A A   AKKK   K+EED LDLNL+L
Subjt:  PPLVLPKPINLVKEATATATTAAKKK---KSEEDFLDLNLTL

A0A6J1JVD5 uncharacterized protein LOC1114881892.4e-2453.57Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP
        ME Q  QPPR+ +A        EEEEE++++E+F+ALVRNFKE+RDR RKE++ GE    AA    K+ K  ETVQN S+WI RFE+EDFDED QV G  
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP

Query:  LVLPKPINLVKEATATATTAAKKKK---SEEDFLDLNLTL
        + LPK   LVKE T  A    KK+K   S  D LDLNL+L
Subjt:  LVLPKPINLVKEATATATTAAKKKK---SEEDFLDLNLTL

A0A6J1KR57 protein NIM1-INTERACTING 12.5e-2660.99Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEE-EEDMKVEEFFALVRNFKEMRDRRRKELMI---GEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQV
        MEKQSL+    RV  AAA VD EEE EE+MK+E FF LVRNFKEMRD+RRKELMI   GE+AAA    AE ++KK++TV+N S WIPRFE+EDFDE+FQV
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEE-EEDMKVEEFFALVRNFKEMRDRRRKELMI---GEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQV

Query:  RGPPLVLPKPINLVKEATATATTAAKKKKSEEDFLDLNLTL
        RGP           KE  A A    KK K+EED LDLNL+L
Subjt:  RGPPLVLPKPINLVKEATATATTAAKKKKSEEDFLDLNLTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 19.3e-0528.57Show/hide
Query:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP
        M K      ++ +       + EEEEE+ K++ FF L+++++E R RRR+EL         A  +   R+K    +     +P F+ EDF +      PP
Subjt:  MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPP

Query:  LVL---PKPINLVKEATATATTAAKKKKSEEDFLDLNLTL
        L+     K  N   E     T    ++++E+  LDLNL L
Subjt:  LVL---PKPINLVKEATATATTAAKKKKSEEDFLDLNLTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCAGAGCTTACAACCACCGCGGGATAGAGTCGCCGCCGCCGCCGCCGCCGTGGACGGCGAGGAGGAAGAGGAAGACATGAAGGTGGAGGAGTTTTTCGCACT
AGTGAGGAATTTCAAGGAAATGCGTGACCGGCGGAGGAAGGAGTTGATGATCGGCGAGGAAGCCGCAGCGGCGGCGGCGACGGCGGAGAAAAAGAGGAAGAAGGTGGAGA
CGGTGCAGAATCCGTCGACGTGGATTCCGAGGTTTGAGAAAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGCCGCTGGTGCTGCCGAAGCCTATCAATCTTGTT
AAAGAAGCAACGGCGACGGCGACGACGGCGGCGAAGAAGAAGAAAAGTGAAGAGGATTTTTTGGATCTTAACCTGACTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATCGAGGGTATTATCGTCTTTCCGCCTGACCTCCCATCACCATTTAAATAGCCCCAATTCAACTAAGAAAAAAGTAAAAACAAAACGCAAGTAGTGTGAGAAATCTTCAT
AGATTTATTACACGGAGACTTTGGTAATGGAAAAGCAGAGCTTACAACCACCGCGGGATAGAGTCGCCGCCGCCGCCGCCGCCGTGGACGGCGAGGAGGAAGAGGAAGAC
ATGAAGGTGGAGGAGTTTTTCGCACTAGTGAGGAATTTCAAGGAAATGCGTGACCGGCGGAGGAAGGAGTTGATGATCGGCGAGGAAGCCGCAGCGGCGGCGGCGACGGC
GGAGAAAAAGAGGAAGAAGGTGGAGACGGTGCAGAATCCGTCGACGTGGATTCCGAGGTTTGAGAAAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGCCGCTGG
TGCTGCCGAAGCCTATCAATCTTGTTAAAGAAGCAACGGCGACGGCGACGACGGCGGCGAAGAAGAAGAAAAGTGAAGAGGATTTTTTGGATCTTAACCTGACTCTGTAG
Protein sequenceShow/hide protein sequence
MEKQSLQPPRDRVAAAAAAVDGEEEEEDMKVEEFFALVRNFKEMRDRRRKELMIGEEAAAAAATAEKKRKKVETVQNPSTWIPRFEKEDFDEDFQVRGPPLVLPKPINLV
KEATATATTAAKKKKSEEDFLDLNLTL