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Sed0013757 (gene) of Chayote v1 genome

Gene IDSed0013757
OrganismSechium edule (Chayote v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412324
Genome locationLG01:61186832..61189217
RNA-Seq ExpressionSed0013757
SyntenySed0013757
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605919.1 hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sororia]5.3e-4065.19Show/hide
Query:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ
        M +  ISSS M L LHSLF+QN RPPLL T K             P  +S  C +VCS +TDSQQFEVDPDKARQALQ+LDQ LQSFS K  +PP+KKV 
Subjt:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ

Query:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        E  KLPR +MRGEMAE+S + LANSA +LFIFSIFYNVLFY +IKPSID PLP+SISS
Subjt:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

KAG7035867.1 hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-4065.19Show/hide
Query:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ
        M +  ISSS M L LHSLF+QN RPPLL T K             P  +S  C +VCS +TDSQQFEVDPDKARQALQ+LDQ LQSFS K  +PP+KKV 
Subjt:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ

Query:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        E  KLPR +MRGEMAE+S + LANSA +LFIFSIFYNVLFY +IKPSID PLP+SISS
Subjt:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

XP_022996085.1 uncharacterized protein LOC111491401 [Cucurbita maxima]2.0e-3964.56Show/hide
Query:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ
        M +  ISSS M L LHSL +QN RPPLL T K             PS +S  C +VCS +TDSQQFEVDPDKARQALQ+LDQ LQSFS K  +PP+KKV 
Subjt:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ

Query:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        E  KLPR +MRGEMAE+S + LANSA +LFIFSIFYNVLFY +IKPSID PLP+S SS
Subjt:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

XP_023533692.1 uncharacterized protein LOC111795475 [Cucurbita pepo subsp. pepo]1.0e-3863.92Show/hide
Query:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ
        M +  ISSS M L LHSL +QN RPPLL T K             PS +S  C +VCS +TDSQQFEVDPDKARQALQ+LDQ LQSFS K  +PP+ KV 
Subjt:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ

Query:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        E  KLPR +MRGEMAE+S + LANSA +LFIFSIFYNVLFY +IKPSID PLP+ ISS
Subjt:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

XP_038901592.1 uncharacterized protein LOC120088397 [Benincasa hispida]1.6e-4166.67Show/hide
Query:  ISSSHMRLPLHSLFHQNQRPPLLPT------------FKPS--SSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKL
        I SS M L L SLF+QNQRPPL+ T            F PS  S+S  C ++C+ +TDSQQFEVDPDKARQALQ+LDQ L+SFS K V+ P+KKVQ+MKL
Subjt:  ISSSHMRLPLHSLFHQNQRPPLLPT------------FKPS--SSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKL

Query:  PRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        PR +MRGEM EI+GT+LANSA +LFIFSIFYNVLFYT+IKPSID PLP+SISS
Subjt:  PRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

TrEMBL top hitse value%identityAlignment
A0A0A0KH36 Uncharacterized protein3.5e-3763.7Show/hide
Query:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG
        L L SLF+QN RPP + T K S              S+    ++C+ ++DSQQFEVDPDKARQALQ+LDQ LQSFS K VS P+KK VQ+M +PR +MRG
Subjt:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG

Query:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        EM EIS TLLANSA +LFIFSIFYNVLFYT+IKPSID PLP+SISS
Subjt:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

A0A1S3BNA1 uncharacterized protein LOC1034915052.4e-3864.38Show/hide
Query:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG
        L L S F+QNQRPP + T K S              S+    ++C+ ++DSQQFEVDPDKARQALQ+LDQ LQSFS K VS P+KK VQ+M LPR +MRG
Subjt:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG

Query:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        EM EI GTLLANSA +LFIFSIFYNVLFYT+IKPSID PLP+SISS
Subjt:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

A0A5D3BB07 Uncharacterized protein2.4e-3864.38Show/hide
Query:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG
        L L S F+QNQRPP + T K S              S+    ++C+ ++DSQQFEVDPDKARQALQ+LDQ LQSFS K VS P+KK VQ+M LPR +MRG
Subjt:  LPLHSLFHQNQRPPLLPTFKPSS-------------SSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKK-VQEMKLPRGEMRG

Query:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        EM EI GTLLANSA +LFIFSIFYNVLFYT+IKPSID PLP+SISS
Subjt:  EMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

A0A6J1D5V3 uncharacterized protein LOC1110173182.4e-3862.5Show/hide
Query:  LPLHSLFHQNQ----RPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGE
        L LHSLF+QNQ     PPL  T K             PSS++  C +VC+ + DSQQFE+DPDKARQALQ+LDQ LQSFS K V+PP+ K Q+MKLPR +
Subjt:  LPLHSLFHQNQ----RPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGE

Query:  MRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISSLRD
        +RGEM+EISG+LLANSA  LFIFSI YNVLFYT+IKPSID PL +SISS R+
Subjt:  MRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISSLRD

A0A6J1K5Q9 uncharacterized protein LOC1114914019.8e-4064.56Show/hide
Query:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ
        M +  ISSS M L LHSL +QN RPPLL T K             PS +S  C +VCS +TDSQQFEVDPDKARQALQ+LDQ LQSFS K  +PP+KKV 
Subjt:  MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFK-------------PSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQ

Query:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS
        E  KLPR +MRGEMAE+S + LANSA +LFIFSIFYNVLFY +IKPSID PLP+S SS
Subjt:  E-MKLPRGEMRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01870.1 unknown protein1.4e-0937.76Show/hide
Query:  VVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGE--MRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAP
        +V +T+ +   F++D DKAR+AL+ LDQ ++S + +      K   ++     +  M  E  EISG+ L +SA +L   ++FYN+LF T+IKPS+D P
Subjt:  VVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGE--MRGEMAEISGTLLANSAALLFIFSIFYNVLFYTLIKPSIDAP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGTGGGGTTCATTAGCAGCTCTCACATGCGCCTTCCCCTTCACTCTCTGTTCCATCAAAACCAGCGCCCGCCATTGTTACCCACCTTCAAACCTTCTTCTTCTTC
TGGTTGTTGCGTCGTTGTGTGCTCAACGGACACCGATTCGCAGCAGTTTGAGGTCGATCCAGACAAGGCCAGGCAGGCGCTTCAAGACCTTGATCAGCACCTTCAATCCT
TCTCCACCAAACCAGTTTCTCCTCCTAGAAAAAAAGTTCAGGAGATGAAACTTCCAAGAGGTGAAATGAGAGGAGAAATGGCAGAGATTTCAGGGACCCTTTTAGCAAAT
TCTGCTGCTCTTCTCTTCATCTTCTCCATTTTCTACAATGTGTTGTTTTATACACTCATAAAGCCTTCCATTGATGCTCCACTGCCAACTTCAATTAGCTCTCTCAGAGA
TTCTAATTGA
mRNA sequenceShow/hide mRNA sequence
AGCGAGAACAGGCGTAGGCGGGAGAAGAGTCGGGTAATACCTGCTGCCAAACAGGCGGCCTCCGGATGGTTAAGGATTAGAGAGAGAGAGGTGGTGAAATAAAGAAGAAA
CACATTATCGAGAATTGGGTTGCCAATTGCCATGGGGGTGGGGTTCATTAGCAGCTCTCACATGCGCCTTCCCCTTCACTCTCTGTTCCATCAAAACCAGCGCCCGCCAT
TGTTACCCACCTTCAAACCTTCTTCTTCTTCTGGTTGTTGCGTCGTTGTGTGCTCAACGGACACCGATTCGCAGCAGTTTGAGGTCGATCCAGACAAGGCCAGGCAGGCG
CTTCAAGACCTTGATCAGCACCTTCAATCCTTCTCCACCAAACCAGTTTCTCCTCCTAGAAAAAAAGTTCAGGAGATGAAACTTCCAAGAGGTGAAATGAGAGGAGAAAT
GGCAGAGATTTCAGGGACCCTTTTAGCAAATTCTGCTGCTCTTCTCTTCATCTTCTCCATTTTCTACAATGTGTTGTTTTATACACTCATAAAGCCTTCCATTGATGCTC
CACTGCCAACTTCAATTAGCTCTCTCAGAGATTCTAATTGACCCACCACTTTTGCAGCACTTTCCATCTCTCTTCATATCCCCATCTCTTCTTACCTAATTTCTAAATCT
CCAAAAAAAAAAAAAACATATATGATTTTACATATACTTTTCTTTTTGGGGATTTTGCATGTATATCAAAAAATAGCAAAATATTTCCATCTATAGCACAAAATCCAAAA
TAATTTCATTTGTAGCAGA
Protein sequenceShow/hide protein sequence
MGVGFISSSHMRLPLHSLFHQNQRPPLLPTFKPSSSSGCCVVVCSTDTDSQQFEVDPDKARQALQDLDQHLQSFSTKPVSPPRKKVQEMKLPRGEMRGEMAEISGTLLAN
SAALLFIFSIFYNVLFYTLIKPSIDAPLPTSISSLRDSN