; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013776 (gene) of Chayote v1 genome

Gene IDSed0013776
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor bHLH146-like
Genome locationLG11:5877914..5878638
RNA-Seq ExpressionSed0013776
SyntenySed0013776
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586090.1 Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia]9.5e-5469.44Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ NKLAYTMFARNYV +L TSL KIS +   Q Q+Q+FQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+    +G+NGF  SL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        Q+VKF++EN E            EE+++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

XP_022153354.1 transcription factor bHLH146 [Momordica charantia]4.9e-5067.42Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGN-HGNNGFEFS
        MGRQI+ KR+RVF L+ NKL Y MFARNY  +L  SL+KIS N       QN QK+VKFEVDMAMA SASEF WG+AL++KLLQ+ + GN +G N F+FS
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGN-HGNNGFEFS

Query:  LQKVKFSQENSEEE----KRMENGLMKLRKILP----IEDSNGD-LEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        LQ +KFS+E  EEE    K+MENGL+KLRKILP      DSNGD LEEDDLLKQTESYIKCLELQVNVLRCLVD+NT+
Subjt:  LQKVKFSQENSEEE----KRMENGLMKLRKILP----IEDSNGD-LEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]1.1e-5470.56Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ NKLAYTMFARNYV +L TSL KIS +   Q Q+QNFQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+    +G+NGF  SL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        Q+VKFS+EN E            EE+++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

XP_022969610.1 transcription factor bHLH146-like [Cucurbita maxima]1.1e-5269.4Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ +KLAYTMFARNYV +L TSL KIS +   Q QQQNFQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+   ++G+NGF FSL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE---------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
          VKFS+EN E               EE+++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE---------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]5.0e-5572.32Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ NKLAYTMFARNYV +L TSL KIS +   Q Q+QNFQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+    +G+NGF FSL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE---------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        Q VKFSQEN E         +E ++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE---------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

TrEMBL top hitse value%identityAlignment
A0A0A0LJA7 Uncharacterized protein9.3e-4764.17Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQ--VGNHGNNGFEF
        M R+++ K +RVF ++ +K+AYTMF RNYV HL TSL KIS     QQQQQNF+KLVKFEVDMAMAQSASEF WG AL+KKLLQRDQ  +GN   NGF+F
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQ--VGNHGNNGFEF

Query:  SLQKV-KFSQEN-------------SEEEKRMENGLMKLRKILPIEDS---NGDL-EEDDLLKQTESYIKCLELQVNVLRCLVDSNT
        S+Q V K SQEN              EEE+ MENGLMKLRKI+P  D+    G+L EEDDLLKQTESY+KCLELQVNVLR LV++NT
Subjt:  SLQKV-KFSQEN-------------SEEEKRMENGLMKLRKILPIEDS---NGDL-EEDDLLKQTESYIKCLELQVNVLRCLVDSNT

A0A1S4DZN3 uncharacterized protein At4g301802.1e-4661.14Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQ----VGNHGNNGF
        M R+I+ K +RVF ++ NK+AYTMFARNYV HL TSL KIS     QQQQQNFQKLV+FEVDMAMAQSASEF WG AL+KKLLQRD     +GN   NGF
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQ----VGNHGNNGF

Query:  EFSLQKVK-----------------FSQENSEEEKRMENGLMKLRKILPIED-----SNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT
        +FSLQ +K                   +E  EEE+ MENGLMKLRKI+P  D      N   EEDDLLKQTESY+KCLELQVNVLR LV++NT
Subjt:  EFSLQKVK-----------------FSQENSEEEKRMENGLMKLRKILPIED-----SNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT

A0A6J1DIU0 transcription factor bHLH1462.4e-5067.42Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGN-HGNNGFEFS
        MGRQI+ KR+RVF L+ NKL Y MFARNY  +L  SL+KIS N       QN QK+VKFEVDMAMA SASEF WG+AL++KLLQ+ + GN +G N F+FS
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGN-HGNNGFEFS

Query:  LQKVKFSQENSEEE----KRMENGLMKLRKILP----IEDSNGD-LEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        LQ +KFS+E  EEE    K+MENGL+KLRKILP      DSNGD LEEDDLLKQTESYIKCLELQVNVLRCLVD+NT+
Subjt:  LQKVKFSQENSEEE----KRMENGLMKLRKILP----IEDSNGD-LEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

A0A6J1FJ33 transcription factor bHLH146-like5.4e-5570.56Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ NKLAYTMFARNYV +L TSL KIS +   Q Q+QNFQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+    +G+NGF  SL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
        Q+VKFS+EN E            EE+++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

A0A6J1I0E6 transcription factor bHLH146-like5.1e-5369.4Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        MGRQIL KRKRV  L+ +KLAYTMFARNYV +L TSL KIS +   Q QQQNFQKLVKFEVDMAMAQSA+EF WGNAL+KKLLQR+   ++G+NGF FSL
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSE---------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
          VKFS+EN E               EE+++ENGLMKLRKI+P   SNG+LEEDDL KQTESYIKCLELQVNVLRCLVD+NTN
Subjt:  QKVKFSQENSE---------------EEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

SwissProt top hitse value%identityAlignment
Q9SKX1 Transcription factor IBH17.7e-0631.47Show/hide
Query:  YVTHLETSLAKI-SSNPSLQQQQQNF--QKLVKFE-VDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSLQKVKFSQENSEEEKR---MENGLM
        +  H   SL+ +   NP     Q+N+  +K+ K   V MA A   S   W  AL ++  + D      N    FS +K K S +     +R   +E    
Subjt:  YVTHLETSLAKI-SSNPSLQQQQQNF--QKLVKFE-VDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSLQKVKFSQENSEEEKR---MENGLM

Query:  KLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVD
        +LR ++P     G +E   L+++T  YIKCL +QV V++CLVD
Subjt:  KLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVD

Q9SUM5 Transcription factor bHLH1469.7e-1734.13Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        M RQI++++KRVF L+ NK    +F R Y +HL  +L K++ N +  +Q       VK EVDMA+A SA EF W   L +KL          ++  +   
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSEEEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT
           +  +E   EE  +E  L +L+K+LP      ++  +++L +  +YIKCLELQ   L+ +V  +T
Subjt:  QKVKFSQENSEEEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT

Arabidopsis top hitse value%identityAlignment
AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors5.1e-2139.33Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQ-QQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQR--DQVGNHGNNGFE
        M RQI++KRKRVF L  NK    +FAR YV+HL  +L KI+ N S  +  +Q+ ++ VK EVDMA A SA EF W   LQ+KLL    D   +  ++  E
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQ-QQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQR--DQVGNHGNNGFE

Query:  FSLQKVKFS-----QENSEEEK--RMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN
           +  K       Q++ EEE+   ++  L +L+K+LP      ++  +++L +  SYI CLELQ+ VL+ +V  NT+
Subjt:  FSLQKVKFS-----QENSEEEK--RMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN

AT2G43060.1 ILI1 binding bHLH 15.4e-0731.47Show/hide
Query:  YVTHLETSLAKI-SSNPSLQQQQQNF--QKLVKFE-VDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSLQKVKFSQENSEEEKR---MENGLM
        +  H   SL+ +   NP     Q+N+  +K+ K   V MA A   S   W  AL ++  + D      N    FS +K K S +     +R   +E    
Subjt:  YVTHLETSLAKI-SSNPSLQQQQQNF--QKLVKFE-VDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSLQKVKFSQENSEEEKR---MENGLM

Query:  KLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVD
        +LR ++P     G +E   L+++T  YIKCL +QV V++CLVD
Subjt:  KLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVD

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators6.9e-1834.13Show/hide
Query:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL
        M RQI++++KRVF L+ NK    +F R Y +HL  +L K++ N +  +Q       VK EVDMA+A SA EF W   L +KL          ++  +   
Subjt:  MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSL

Query:  QKVKFSQENSEEEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT
           +  +E   EE  +E  L +L+K+LP      ++  +++L +  +YIKCLELQ   L+ +V  +T
Subjt:  QKVKFSQENSEEEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGCAAATTTTGAGTAAAAGAAAAAGGGTTTTTCCCCTTGACTCAAACAAACTTGCATACACCATGTTTGCAAGAAACTATGTCACACATTTGGAGACATCCTT
AGCCAAAATTTCTTCAAATCCTTCTCTTCAACAACAACAACAAAATTTTCAAAAACTTGTGAAGTTTGAGGTTGACATGGCAATGGCTCAATCAGCAAGTGAATTTGAAT
GGGGCAATGCTCTTCAAAAGAAGCTTCTTCAAAGAGATCAAGTTGGCAATCATGGAAACAATGGCTTTGAATTTTCTCTCCAAAAAGTGAAATTTTCTCAAGAAAATTCA
GAAGAAGAGAAAAGGATGGAAAATGGATTGATGAAGCTGAGGAAAATCTTACCAATTGAGGATTCTAATGGAGATTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAG
TTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATTCAAACACAAATTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGAGCCTCTCCATTTCCCTCTCTTCACCAAATCTCATCTTTTTTTTTTCCTTTCTCTTTTCCAAAGCTCCATTGCTTTATCAAATTTCAAAGCTTTTTCCACCTAC
AATTCTTCAATATTTTTGTGTGAAAATATGGGAAGGCAAATTTTGAGTAAAAGAAAAAGGGTTTTTCCCCTTGACTCAAACAAACTTGCATACACCATGTTTGCAAGAAA
CTATGTCACACATTTGGAGACATCCTTAGCCAAAATTTCTTCAAATCCTTCTCTTCAACAACAACAACAAAATTTTCAAAAACTTGTGAAGTTTGAGGTTGACATGGCAA
TGGCTCAATCAGCAAGTGAATTTGAATGGGGCAATGCTCTTCAAAAGAAGCTTCTTCAAAGAGATCAAGTTGGCAATCATGGAAACAATGGCTTTGAATTTTCTCTCCAA
AAAGTGAAATTTTCTCAAGAAAATTCAGAAGAAGAGAAAAGGATGGAAAATGGATTGATGAAGCTGAGGAAAATCTTACCAATTGAGGATTCTAATGGAGATTTGGAAGA
AGATGATTTGTTGAAACAAACTGAAAGTTATATAAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATTCAAACACAAATTGATTTTGATCCTTTTTTC
CCCCTTATTTTTTCTTGCTAATTTCTATGTGGAAATGAAAGAAATATTATATGAATTTGCAGCTA
Protein sequenceShow/hide protein sequence
MGRQILSKRKRVFPLDSNKLAYTMFARNYVTHLETSLAKISSNPSLQQQQQNFQKLVKFEVDMAMAQSASEFEWGNALQKKLLQRDQVGNHGNNGFEFSLQKVKFSQENS
EEEKRMENGLMKLRKILPIEDSNGDLEEDDLLKQTESYIKCLELQVNVLRCLVDSNTN