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Sed0013783 (gene) of Chayote v1 genome

Gene IDSed0013783
OrganismSechium edule (Chayote v1)
Descriptionrhodanese-like domain-containing protein 4, chloroplastic
Genome locationLG12:5045985..5047255
RNA-Seq ExpressionSed0013783
SyntenySed0013783
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0008061 - chitin binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR036873 - Rhodanese-like domain superfamily
IPR044240 - Rhodanese-like domain-containing protein STR4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597089.1 Rhodanese-like domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4986.21Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

XP_022974654.1 rhodanese-like domain-containing protein 4, chloroplastic isoform X1 [Cucurbita maxima]4.5e-4985.34Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

XP_022974944.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita maxima]4.5e-4985.34Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

XP_023539430.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-4986.21Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

XP_023539567.1 rhodanese-like domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]1.2e-4986.21Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

TrEMBL top hitse value%identityAlignment
A0A0A0L8L6 Rhodanese domain-containing protein1.4e-4886.61Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVG+PD+K LGKKPV ITYKG+DKPGFLKKL LKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDGAEGP GWTNSGLPWLTPK  LS SS
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGED
        LTDAIAG FGED
Subjt:  LTDAIAGVFGED

A0A6J1FCG4 rhodanese-like domain-containing protein 4, chloroplastic2.8e-4985.34Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPG LKKLALKFKEPQNTTLFILDKYDGNSELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

A0A6J1IEI2 rhodanese-like domain-containing protein 4, chloroplastic isoform X21.1e-4884.48Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGP GW NSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

A0A6J1II89 rhodanese-like domain-containing protein 4, chloroplastic isoform X12.2e-4985.34Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

A0A6J1IJ07 rhodanese-like domain-containing protein 4, chloroplastic2.2e-4985.34Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        RKVGSPDI+KLGKKPV I YKG+DKPGFLKKLALKFKEPQNTTLFILDKYDG+SELVAEL+ VNGFKA FAIKDG EGP GWTNSGLPWLTPKSPLS  S
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  LTDAIAGVFGEDFKVF
        LTDAIAG  GED + F
Subjt:  LTDAIAGVFGEDFKVF

SwissProt top hitse value%identityAlignment
A2X345 Protein THYLAKOID RHODANESE-LIKE, chloroplastic4.4e-3160.4Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG  GW +S LPW  PK   S S 
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  L
        L
Subjt:  L

Q56XR7 Rhodanese-like domain-containing protein 4A, chloroplastic6.3e-1437.37Show/hide
Query:  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW
        +N S+ +    +       + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G +GW
Subjt:  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW

Q6ETQ7 Protein THYLAKOID RHODANESE-LIKE, chloroplastic4.4e-3160.4Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS
        R+ G+PD+++  KK   + Y G+DK GFLKKL+L+FK+P+NTTL ILDK+DGNSELVAEL+  NG+KA FA+KDGAEG  GW +S LPW  PK   S S 
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLSFSS

Query:  L
        L
Subjt:  L

Q9M158 Rhodanese-like domain-containing protein 4, chloroplastic1.6e-4171.68Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--F
        R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGP GW NS LPW+ PK  LS   
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--F

Query:  SSLTDAIAGVFGE
        SSLTD+I+GVFGE
Subjt:  SSLTDAIAGVFGE

Arabidopsis top hitse value%identityAlignment
AT3G25480.1 Rhodanese/Cell cycle control phosphatase superfamily protein4.5e-1537.37Show/hide
Query:  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW
        +N S+ +    +       + SP++K LGK  V + +  +D+ GFL K+   F + +NT + +LD +DGNS  VAEL++ NGFK  + I+ GA G +GW
Subjt:  RNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGW

AT4G01050.1 thylakoid rhodanese-like1.1e-4271.68Show/hide
Query:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--F
        R+VGSP+IK LGKK V   Y G+DKPGFLKKL+LKFK+P+NTTL+ILDK+DGNSELVAEL+ +NGFK+ +AIKDGAEGP GW NS LPW+ PK  LS   
Subjt:  RKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATFAIKDGAEGPSGWTNSGLPWLTPKSPLS--F

Query:  SSLTDAIAGVFGE
        SSLTD+I+GVFGE
Subjt:  SSLTDAIAGVFGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACGCCCTAGAACCACAAATCTTTGACCTAAAGCGCTGCCACACGGAGTTTCAAGTGCCCGAACGAAATAGAAGCAACATAAAATGTGAGAAAACAAAAGGAAC
AAATTTACAAAGGAAAGTAGGTAGCCCCGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTT
TGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTT
GCAATTAAAGATGGTGCAGAAGGACCTAGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCAGTCTAACAGATGCTATTGCTGG
TGTGTTTGGAGAGGATTTCAAGGTTTTCCTGCTTTGTTGCTCTTTTGTGCAATATGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACGCCCTAGAACCACAAATCTTTGACCTAAAGCGCTGCCACACGGAGTTTCAAGTGCCCGAACGAAATAGAAGCAACATAAAATGTGAGAAAACAAAAGGAAC
AAATTTACAAAGGAAAGTAGGTAGCCCCGATATTAAAAAGTTGGGCAAAAAGCCTGTGGTTATTACTTACAAAGGTGACGATAAGCCTGGTTTCTTGAAGAAGCTTGCTT
TGAAGTTCAAGGAGCCACAAAATACCACATTGTTCATCTTGGACAAATATGATGGGAACTCTGAACTCGTCGCAGAGTTGATCGTTGTAAATGGATTCAAAGCTACTTTT
GCAATTAAAGATGGTGCAGAAGGACCTAGTGGATGGACGAATAGTGGTCTTCCTTGGTTAACACCAAAGTCACCTTTGAGTTTTAGCAGTCTAACAGATGCTATTGCTGG
TGTGTTTGGAGAGGATTTCAAGGTTTTCCTGCTTTGTTGCTCTTTTGTGCAATATGTTGATTGTGTGATGGATACAATGGAAAAACAAACAAACAACAATATTTGA
Protein sequenceShow/hide protein sequence
MENALEPQIFDLKRCHTEFQVPERNRSNIKCEKTKGTNLQRKVGSPDIKKLGKKPVVITYKGDDKPGFLKKLALKFKEPQNTTLFILDKYDGNSELVAELIVVNGFKATF
AIKDGAEGPSGWTNSGLPWLTPKSPLSFSSLTDAIAGVFGEDFKVFLLCCSFVQYVDCVMDTMEKQTNNNI