CuGenDBv2

Gene ID	Sed0013824
Organism	Sechium edule (Chayote v1)
Description	protein EARLY RESPONSIVE TO DEHYDRATION 15-like
Genome location	LG03:2181087..2181592
RNA-Seq Expression	Sed0013824
Synteny	Sed0013824
Gene Ontology terms	NA
InterPro domains	IPR040414 - PAM2-containing protein CID1/CID2

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0052043.1 Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa]

3.4e-25

56.25

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS
        MDVVT++   +SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ +L F ++EEF+L  L + F +  R  + E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K +KAR+G E P++AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

KAG6602602.1 Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia]

3.4e-25

56.94

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV R+   +SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ D SF+++EE +L  L   F++ A Q   E+ EFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KA+TG E PR+AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

KAG7033281.1 Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-25

57.64

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV R+T   SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ D SF+++EE +L  L   F++ A Q   E+ EFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KA+TG E PR+AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

KGN45812.1 hypothetical protein Csa_005499 [Cucumis sativus]

6.8e-26

57.64

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS
        MDVVT++   +SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ +LSF ++EEFIL  L + F +  R  + E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K +KAR+G E P++AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

XP_022990060.1 protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucurbita maxima]

1.5e-25

57.64

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV R+T   SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ D SF+++EE +L  L   F + A Q   E+ EFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KA+TG E PR+AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBP8 Poly(A)-binding protein C-terminal interacting protein 6

3.3e-26

57.64

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS
        MDVVT++   +SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ +LSF ++EEFIL  L + F +  R  + E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K +KAR+G E P++AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

A0A5D3BZS0 Poly(A)-binding protein C-terminal interacting protein 6

1.6e-25

56.25

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS
        MDVVT++   +SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ +L F ++EEF+L  L + F +  R  + E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKE--RAHQMEKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K +KAR+G E P++AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

A0A6J1FFC6 protein EARLY RESPONSIVE TO DEHYDRATION 15-like

1.2e-23

56.25

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV     ++SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ DLSF +++E +L  L    ++ A Q   E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KARTG E PR+AQK PK VNVKV+PR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

A0A6J1JP33 protein EARLY RESPONSIVE TO DEHYDRATION 15-like

7.3e-26

57.64

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV R+T   SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ D SF+++EE +L  L   F + A Q   E+ EFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KA+TG E PR+AQK PK VNVKVSPR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

A0A6J1JQA7 protein EARLY RESPONSIVE TO DEHYDRATION 15-like

5.2e-24

56.25

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Query:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS
        MDVV     ++SSSSVSMLNPN APLF PMA    +DFS  W+  I S P FR  W+   FQ PQ DLSF++++E +L  L    ++ A Q   E+LEFS
Subjt:  MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQM--EKLEFS

Query:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR
        KDL P  A K  KARTG E PR+AQK PK VNVKV+PR IHQPR
Subjt:  KDLAPSRASKRKKARTGPEAPRFAQKPPKTVNVKVSPRRIHQPR

SwissProt top hits

e value

%identity

Alignment

I1JIC4 Protein EARLY RESPONSIVE TO DEHYDRATION 15

1.3e-08

39.53

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Query:  SVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQMEKLEFSKDLAPSRASKRKKART
        S S LNPN AP+F P+A    +DFS  W+  +HS P FR  W+   FQ PQ     + D +F L       KER          K++      K +    
Subjt:  SVSMLNPNDAPLFDPMA----DDFSYYWFFPIHSPPSFR--WIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQMEKLEFSKDLAPSRASKRKKART

Query:  G-PEAPRFAQKPPKTVNVKVSPRRIHQPR
        G  +APR+ +K PK V  KVSPR IHQPR
Subjt:  G-PEAPRFAQKPPKTVNVKVSPRRIHQPR

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATGTGGTTACTCGAAAAACGCCGTCGTCGTCGTCGTCTTCCGTTTCGATGTTAAACCCTAATGATGCTCCACTGTTCGATCCTATGGCGGATGACTTCTCCTATTA
TTGGTTTTTTCCGATCCATTCCCCTCCCTCATTTCGCTGGATCGATGTAGGCTTTCAATATCCTCAAATCGATCTTTCCTTTTCAGATGACGAAGAATTCATCCTTACAC
GTCTCTGCACTTGCTTCAAGGAACGCGCACATCAAATGGAGAAGCTCGAATTCTCGAAGGATTTGGCTCCGAGTAGGGCTTCCAAACGGAAGAAGGCTAGGACTGGGCCG
GAGGCTCCTAGGTTTGCTCAAAAGCCTCCCAAGACCGTCAACGTCAAAGTGAGTCCAAGAAGGATCCACCAGCCGAGATAG

mRNA sequence

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Protein sequence

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MDVVTRKTPSSSSSSVSMLNPNDAPLFDPMADDFSYYWFFPIHSPPSFRWIDVGFQYPQIDLSFSDDEEFILTRLCTCFKERAHQMEKLEFSKDLAPSRASKRKKARTGP
EAPRFAQKPPKTVNVKVSPRRIHQPR

Sed0013824 (gene) of Chayote v1 genome