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Sed0013825 (gene) of Chayote v1 genome

Gene IDSed0013825
OrganismSechium edule (Chayote v1)
Descriptionprotein BIC1-like
Genome locationLG02:42853894..42854923
RNA-Seq ExpressionSed0013825
SyntenySed0013825
Gene Ontology termsGO:0009785 - blue light signaling pathway (biological process)
InterPro domainsIPR040374 - Protein BIC


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580697.1 Protein BIC1, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3262.69Show/hide
Query:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES--------------AAA-----EEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAF
        ++YS+S PPP  A   G E+       S+ GGKRSES              AAA     EEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDC AF
Subjt:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES--------------AAA-----EEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAF

Query:  DASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        DA LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  DASLFPAGIGSARAALVEEGRRASNGGFRLENRC

XP_022144700.1 protein BIC1 [Momordica charantia]3.0e-3276.04Show/hide
Query:  AEKLGTERSYDGGKRSESAAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        A KL +E     G+ + + AAEEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDCSAFDA LFP GIGSARAAL+EEGRRA+NGGFRLENRC
Subjt:  AEKLGTERSYDGGKRSESAAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC

XP_022934355.1 protein BIC1-like [Cucurbita moschata]2.7e-3362.6Show/hide
Query:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES----------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS
        ++YS+S PPP  A   G E+       S+ GGKRSES                A+ EEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDC AFDA 
Subjt:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES----------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS

Query:  LFPAGIGSARAALVEEGRRASNGGFRLENRC
        LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  LFPAGIGSARAALVEEGRRASNGGFRLENRC

XP_022983147.1 protein BIC1-like [Cucurbita maxima]1.7e-3261.36Show/hide
Query:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA
        +YS+S PPP  A+  G E+       S+ GGKRSES                  +  EEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDC AFDA
Subjt:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA

Query:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC
         LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC

XP_023528325.1 protein BIC1-like [Cucurbita pepo subsp. pepo]1.1e-3161.36Show/hide
Query:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA
        +YS+S PPP  A   G E+       S+ GGKRSES                  A  EEE GRERLKRHR E++GRVWIPE+WGQEE LKDWIDC AFDA
Subjt:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA

Query:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC
         LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC

TrEMBL top hitse value%identityAlignment
A0A6J1CSD1 protein BIC11.4e-3276.04Show/hide
Query:  AEKLGTERSYDGGKRSESAAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        A KL +E     G+ + + AAEEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDCSAFDA LFP GIGSARAAL+EEGRRA+NGGFRLENRC
Subjt:  AEKLGTERSYDGGKRSESAAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC

A0A6J1EGP6 protein BIC1-like3.0e-3060.31Show/hide
Query:  PPPLT-------AEKLGTER---SYDGGKRSESAA--------------------AEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS
        PPPLT       AEK+G E+   S    KRSES                       EEE GRERLKRHRRE++GRVWIP++WGQEE LK+WIDCS FDA 
Subjt:  PPPLT-------AEKLGTER---SYDGGKRSESAA--------------------AEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS

Query:  LFPAGIGSARAALVEEGRRASNGGFRLENRC
        LFP GIG ARAALVEEGRRA+NGGFRLENRC
Subjt:  LFPAGIGSARAALVEEGRRASNGGFRLENRC

A0A6J1F7F9 protein BIC1-like1.3e-3362.6Show/hide
Query:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES----------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS
        ++YS+S PPP  A   G E+       S+ GGKRSES                A+ EEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDC AFDA 
Subjt:  MEYSVSAPPPLTAEKLGTER-------SYDGGKRSES----------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDAS

Query:  LFPAGIGSARAALVEEGRRASNGGFRLENRC
        LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  LFPAGIGSARAALVEEGRRASNGGFRLENRC

A0A6J1IYG7 protein BIC1-like8.4e-3361.36Show/hide
Query:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA
        +YS+S PPP  A+  G E+       S+ GGKRSES                  +  EEE GRERLKRHRRE++GRVWIPE+WGQEE LKDWIDC AFDA
Subjt:  EYSVSAPPPLTAEKLGTER-------SYDGGKRSES------------------AAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDA

Query:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC
         LFP GIGSARAAL+EEGRRA+NGGFR ENRC
Subjt:  SLFPAGIGSARAALVEEGRRASNGGFRLENRC

A0A6J1KWF3 protein BIC1-like3.9e-3061.19Show/hide
Query:  PPPLT-------AEKLGTER---SYDGGKRSES-------------------AAA----EEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAF
        PPPLT       AEK+G E+   S    KRSES                   AAA    EEE GRERLKRHRRE+ GRVWIP++WGQEE LK+WIDCS F
Subjt:  PPPLT-------AEKLGTER---SYDGGKRSES-------------------AAA----EEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAF

Query:  DASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        DA LFP GIG ARAALVEEGRRA+NGGFRLENRC
Subjt:  DASLFPAGIGSARAALVEEGRRASNGGFRLENRC

SwissProt top hitse value%identityAlignment
Q9LXJ1 Protein BIC12.8e-2572.6Show/hide
Query:  ESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        ++GRERLK+HRREI+GRVWIPE+WGQEE LKDWIDCS FD  L PAGI SAR ALVEE RRA++    L NRC
Subjt:  ESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC

Q9M280 Protein BIC22.5e-1047.44Show/hide
Query:  SGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALV-----EEGRRASN-GGFRLENRC
        SGR+RLKRHR E++G+V IP+ WG+E  L  W+D S FDA+   + I SARAAL+     + G R S     R+E+ C
Subjt:  SGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALV-----EEGRRASN-GGFRLENRC

Arabidopsis top hitse value%identityAlignment
AT3G44450.1 unknown protein1.8e-1147.44Show/hide
Query:  SGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALV-----EEGRRASN-GGFRLENRC
        SGR+RLKRHR E++G+V IP+ WG+E  L  W+D S FDA+   + I SARAAL+     + G R S     R+E+ C
Subjt:  SGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALV-----EEGRRASN-GGFRLENRC

AT3G52740.1 unknown protein2.0e-2672.6Show/hide
Query:  ESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC
        ++GRERLK+HRREI+GRVWIPE+WGQEE LKDWIDCS FD  L PAGI SAR ALVEE RRA++    L NRC
Subjt:  ESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATACTCTGTTTCTGCGCCTCCGCCGTTGACGGCGGAGAAACTCGGAACCGAACGGAGTTACGACGGAGGAAAACGCTCGGAATCGGCGGCGGCGGAGGAGGAAAG
CGGACGGGAGAGGCTGAAGAGGCACCGGCGGGAGATCTCCGGCCGAGTGTGGATACCGGAGTTATGGGGGCAAGAGGAGTTTCTGAAGGATTGGATCGATTGCTCCGCCT
TCGACGCTAGTTTATTTCCGGCCGGAATCGGATCGGCGAGGGCGGCGTTGGTTGAAGAAGGAAGGAGGGCCAGCAATGGCGGATTCCGATTGGAGAACAGGTGCTGA
mRNA sequenceShow/hide mRNA sequence
CTCCAAACAAATTCCAATAATAAATGTGATTTGAAATTTGAACAATACCATGTAGGCCAATCAACACCAGCCTCACAAACCAAACCCCCCAAATTCCAATCTTACCCCTT
CCTTTATTTTTCTGTCCTATGGATATTTTCCCCCAAATTCACAATCAAAACCAAAACCACAAATCTCACCAACTTCAGTTTCTTCATACTTTAATTTCCCCTTCACTGTT
CAATTCAATACATCCAATCCATTTTGCTTCCATGGCGGACGGAGCTCTCGTCTAGGAGAAAACCTCGACCGAGTTCTCGGAATATGGAATACTCTGTTTCTGCGCCTCCG
CCGTTGACGGCGGAGAAACTCGGAACCGAACGGAGTTACGACGGAGGAAAACGCTCGGAATCGGCGGCGGCGGAGGAGGAAAGCGGACGGGAGAGGCTGAAGAGGCACCG
GCGGGAGATCTCCGGCCGAGTGTGGATACCGGAGTTATGGGGGCAAGAGGAGTTTCTGAAGGATTGGATCGATTGCTCCGCCTTCGACGCTAGTTTATTTCCGGCCGGAA
TCGGATCGGCGAGGGCGGCGTTGGTTGAAGAAGGAAGGAGGGCCAGCAATGGCGGATTCCGATTGGAGAACAGGTGCTGATTTTTTTTTTAGGGTTGGGGTTAATTAATT
GCAATTAAAAATAAAAATAAAAAGAAAAATAAAAATAAAAACAGAGAAACTCATTTCCCGAGCTTTGAATATTAGTTTCCATTATCTGGGGAAGGGAATTTCAAATGGAA
ACAATTAGACTAATTAGATTTTTTAATGTTAGTTTCCATGATTTTGTTAAAATACAATTATAAATTCTCCATGTAACTTTCAGTGCGTTTATTGTTGTAATACAATTATG
AATTCTATTTCGTTTCTCAAAAAAATATAATTACGAATTCTATTTTTTCATGGGAGAAAGGTGAGGAATCTTTTTAAATTATATCGGAGTTAATGTAATATTTTCATTGT
TTCGTTGTAATTCAATTTAACATTAACGTCAGGTTCTGTG
Protein sequenceShow/hide protein sequence
MEYSVSAPPPLTAEKLGTERSYDGGKRSESAAAEEESGRERLKRHRREISGRVWIPELWGQEEFLKDWIDCSAFDASLFPAGIGSARAALVEEGRRASNGGFRLENRC