; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013832 (gene) of Chayote v1 genome

Gene IDSed0013832
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:46983094..46984213
RNA-Seq ExpressionSed0013832
SyntenySed0013832
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049726.1 hypothetical protein E6C27_scaffold76G00740 [Cucumis melo var. makuwa]3.5e-5686.82Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        M+ YRSR   DSILDSLSLNPPPYPVLLLL VV +FLGASWWLSYESAVEAAE+HINWILFATPVLLI LVR LSS+DPSFFSSSP DRRRRTH +PA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        TSPWGVAAFIVLLLVL+QFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

KAG6588994.1 hypothetical protein SDJN03_17559, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5486.05Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        MS YRSR   DSILDSLSLNP PYPVLLLL VVF+FLGASWWLSYESAVEAAE+ INWILFATPVLLI L R+LSSVDPS+FSSSP DRRRRTH LPA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVLVQFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

KGN43227.1 hypothetical protein Csa_020160 [Cucumis sativus]3.9e-5584.5Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        M+ YR+R   DSILDSLSLNPPPYPVLLLL VV +FLGASWWLSYESAVEAAE+HINWILFATPVLLI LVR LSS+DP+FFSSSP DRRRRTH +PA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        TSPWGVAAFI+LLLVL+QFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

XP_022989070.1 uncharacterized protein LOC111486253 [Cucurbita maxima]1.1e-5486.82Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        MS YRSR   DSILDSLSLNP PYPVLLLL VVF+FLGASWWLSYESAVEAAE+ INWILFATPVLLI L R LSSVDPSFFSSSP DRRRRTH LPA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVLVQFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

XP_038888316.1 uncharacterized protein LOC120078163 [Benincasa hispida]1.5e-5486.05Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        M+ YR+R   DSILDSLSLNPPPYPVLLLL VV +FLGASWWLSYESAVEAAE+ INWILFATPVLLI LVR+LSSVDPSFFSSSP DRRRRTH LPA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVLVQFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

TrEMBL top hitse value%identityAlignment
A0A061DZG1 Uncharacterized protein8.7e-3762.6Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPS--FFSSSPADRRRRTHDLPA
        M+ YR    GDSI DS SL+P PYPVLL+L V  +FLG SW+++YES +EAAEE ++W+L  TPV+LIFL R LSSV+ S   F SSP +RRRRTH LP+
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPS--FFSSSPADRRRRTHDLPA

Query:  DGTSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +G+SPW VA FIVLLL+LVQ+QS FRESW +
Subjt:  DGTSPWGVAAFIVLLLVLVQFQSSFRESWSI

A0A0A0K4L6 Uncharacterized protein1.9e-5584.5Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        M+ YR+R   DSILDSLSLNPPPYPVLLLL VV +FLGASWWLSYESAVEAAE+HINWILFATPVLLI LVR LSS+DP+FFSSSP DRRRRTH +PA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        TSPWGVAAFI+LLLVL+QFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

A0A5A7U6E4 Uncharacterized protein1.7e-5686.82Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        M+ YRSR   DSILDSLSLNPPPYPVLLLL VV +FLGASWWLSYESAVEAAE+HINWILFATPVLLI LVR LSS+DPSFFSSSP DRRRRTH +PA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        TSPWGVAAFIVLLLVL+QFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

A0A6J1C2N0 uncharacterized protein LOC1110078958.1e-5182.95Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        MSQYR R+  DSILDSLSLNP PYPVLLLL VVF+FLGASWW SYESAVEAAEE INW+LFATPVLLI LVR LSSVDPSFF+SSP +RRR TH LP +G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVLVQFQS+FRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

A0A6J1JLC4 uncharacterized protein LOC1114862535.5e-5586.82Show/hide
Query:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG
        MS YRSR   DSILDSLSLNP PYPVLLLL VVF+FLGASWWLSYESAVEAAE+ INWILFATPVLLI L R LSSVDPSFFSSSP DRRRRTH LPA+G
Subjt:  MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADG

Query:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI
        +SPWGVAA IVLLLVLVQFQSSFRESWSI
Subjt:  TSPWGVAAFIVLLLVLVQFQSSFRESWSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21180.1 unknown protein1.1e-2654.92Show/hide
Query:  SILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVD-PSFFSSSPADRRRRTHDLPA----DGTSPWGV
        SILDS SL+P PYPVLL+L V  +FL +SW+ S E A E+AEE IN+ L   P+ LI LVR LSS++ P       +  RR T+  P      G+SPWGV
Subjt:  SILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVD-PSFFSSSPADRRRRTHDLPA----DGTSPWGV

Query:  AAFIVLLLVLVQFQSSFRESWS
        AA IVLLLVL+Q+QSSF E WS
Subjt:  AAFIVLLLVLVQFQSSFRESWS

AT2G21185.1 unknown protein1.5e-0437.29Show/hide
Query:  PYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILF-ATPVLLIFLVRLLSSVDPS
        P PV++++TV  + L  S  + +E AV + E+ ++W+L  A P+ L+F VR LS ++ S
Subjt:  PYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILF-ATPVLLIFLVRLLSSVDPS

AT2G31940.1 unknown protein6.9e-1029.91Show/hide
Query:  PPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPWGVAAFIVLLLVLVQFQ
        P P  + + + ++ +F+  SW+ SYE  +E         L A+P+LL+  V  LS         +          L   G +PWGVA  +V L  +V +Q
Subjt:  PPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPWGVAAFIVLLLVLVQFQ

Query:  SSFRESW
        S F+E W
Subjt:  SSFRESW

AT5G19875.1 unknown protein5.5e-1539.02Show/hide
Query:  RSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPW
        RS   G S LD LSL P P+ +  L  VVF  L  +W+L++ES +E   +H+  +   TP+ L+ LV   S    SF+   P         +   G+SPW
Subjt:  RSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPW

Query:  GVAAFIVLLLVLVQFQSSFRESW
        GVAA +VL+L +V +QS F+E W
Subjt:  GVAAFIVLLLVLVQFQSSFRESW

AT5G42146.1 unknown protein4.8e-1133.33Show/hide
Query:  LSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPWGVAAFIVLLLVL
        L+ + PP  +L LL ++ L L  S +  Y+  VE    ++   +   P+L +F++  LS V    F SS + R  +   L  +G  PWGV   ++LLL+L
Subjt:  LSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPWGVAAFIVLLLVL

Query:  VQFQSSFRESW
        V  QS F   W
Subjt:  VQFQSSFRESW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCAATACAGAAGCAGAGCCGCCGGAGATTCAATTCTCGATTCTCTGTCCCTGAATCCGCCGCCGTATCCCGTCCTCCTCCTCCTCACCGTCGTCTTCCTCTTCCT
CGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCCGAGGAACATATCAACTGGATTCTCTTCGCCACGCCTGTCCTCCTCATCTTCCTCGTCCGATTGC
TCTCCTCCGTAGATCCGAGCTTCTTCTCCTCATCGCCGGCCGACCGCCGCCGCCGCACGCACGACCTCCCCGCCGACGGAACCTCGCCCTGGGGCGTCGCTGCGTTCATC
GTCCTCTTGCTCGTTCTCGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATTTAAAAATAAACCCCAAAATTAGAGTGATGCATTGAATTATGCATATGAGGCAGATAAAATAGGCAAGGAGTTTGTAATCTTACAGTAAAAAACAAACGGTCAA
GATTTCCCCAATCACCGACCAGCACATGGCTCCCCGTACACCGGGCCACACCGAATCACAACCCGAGTCATCTTCCCGCTATAAAAGCACTGAACTAAATCGTCATTTCT
CAAAGGCCAAACAGAAATCCCCAAATCGATGAGCCAATACAGAAGCAGAGCCGCCGGAGATTCAATTCTCGATTCTCTGTCCCTGAATCCGCCGCCGTATCCCGTCCTCC
TCCTCCTCACCGTCGTCTTCCTCTTCCTCGGCGCCTCCTGGTGGCTCTCCTACGAGTCCGCCGTCGAGGCCGCCGAGGAACATATCAACTGGATTCTCTTCGCCACGCCT
GTCCTCCTCATCTTCCTCGTCCGATTGCTCTCCTCCGTAGATCCGAGCTTCTTCTCCTCATCGCCGGCCGACCGCCGCCGCCGCACGCACGACCTCCCCGCCGACGGAAC
CTCGCCCTGGGGCGTCGCTGCGTTCATCGTCCTCTTGCTCGTTCTCGTCCAGTTCCAGTCCTCGTTCCGTGAGAGCTGGTCCATATAGGATCGTTGTCTGTACATAAATT
GGCGCTGTGGTGGAGATCTGCGTTGCCTTTAGATTTGATTTGATTTTTGTAAAAGGGCTTGAATGAAGTTGATGATGAAGATGAACCATAGGGAACTGAAGAATTTGATT
TTGAAAACAAATTTATATTCATAACTAGAATTTATTATTTTGAACCTGTTTTTGTTTATCAAATTACTCTTATCTTGATTTTGTTTTTTTAATTTTTGTTGTTTGTACAT
CACTTTGTAATTGTGAATGGAACATATCGTTTGTTTTCTCCACCATAGGGAACTGAAGAATTTG
Protein sequenceShow/hide protein sequence
MSQYRSRAAGDSILDSLSLNPPPYPVLLLLTVVFLFLGASWWLSYESAVEAAEEHINWILFATPVLLIFLVRLLSSVDPSFFSSSPADRRRRTHDLPADGTSPWGVAAFI
VLLLVLVQFQSSFRESWSI