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Sed0013836 (gene) of Chayote v1 genome

Gene IDSed0013836
OrganismSechium edule (Chayote v1)
Descriptionprotein RALF-like 34
Genome locationLG01:776999..777376
RNA-Seq ExpressionSed0013836
SyntenySed0013836
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571407.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4175.4Show/hide
Query:  MASKLLL-ITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY
        MASKLL      LLL   ++A+AHL VDTSLKLM DALEWPTTIS+     D D D  ++D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYY
Subjt:  MASKLLL-ITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY

Query:  THNCYKARGPVNPYSRGCTAITRCRR
        THNCYKARGPVNPYSRGC+AITRCRR
Subjt:  THNCYKARGPVNPYSRGCTAITRCRR

XP_008457868.1 PREDICTED: protein RALF-like 34 [Cucumis melo]6.2e-4276.98Show/hide
Query:  MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY
        MASK LL +   LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   D D D    D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYY
Subjt:  MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY

Query:  THNCYKARGPVNPYSRGCTAITRCRR
        THNCYKARGPVNPYSRGC+AITRCRR
Subjt:  THNCYKARGPVNPYSRGCTAITRCRR

XP_022928024.1 protein RALF-like 34 [Cucurbita moschata]3.6e-4274.02Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY
        MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+       D D D  ++D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPY
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY

Query:  YTHNCYKARGPVNPYSRGCTAITRCRR
        YTHNCYKARGPVNPYSRGC+AITRCRR
Subjt:  YTHNCYKARGPVNPYSRGCTAITRCRR

XP_023513191.1 protein RALF-like 34 [Cucurbita pepo subsp. pepo]2.1e-4275.2Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT
        MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+     D D D  ++D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPYYT
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT

Query:  HNCYKARGPVNPYSRGCTAITRCRR
        HNCYKARGPVNPYSRGC+AITRCRR
Subjt:  HNCYKARGPVNPYSRGCTAITRCRR

XP_038900702.1 protein RALF-like 34 [Benincasa hispida]3.6e-4276.8Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT
        MASK LL+   +LL   +S++AHLSVDTSLKLM DALEWPTT SL +     D D    D EQDPRRSLFWRRVHYYISYGALAANRIPCP RSGRPYYT
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT

Query:  HNCYKARGPVNPYSRGCTAITRCRR
        HNCYKARGPVNPYSRGC+AITRCRR
Subjt:  HNCYKARGPVNPYSRGCTAITRCRR

TrEMBL top hitse value%identityAlignment
A0A0A0LMS2 Uncharacterized protein4.3e-4175.4Show/hide
Query:  MASKLLLITA-ALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY
        MASK LL     LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   + D D    D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYY
Subjt:  MASKLLLITA-ALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY

Query:  THNCYKARGPVNPYSRGCTAITRCRR
        THNCYKARGPVNPY+RGC+AITRCRR
Subjt:  THNCYKARGPVNPYSRGCTAITRCRR

A0A151TIM7 Uncharacterized protein1.4e-3172Show/hide
Query:  DTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD-PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR
        +T+L LM DAL+WPTT+SL    +D DQD   ED E    RRSLFWRR+ YYISYGAL+ANRIPCP RSGR YYTHNCYKARGPV+PYSRGC+ ITRCRR
Subjt:  DTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD-PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR

A0A1S3C7S7 protein RALF-like 343.0e-4276.98Show/hide
Query:  MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY
        MASK LL +   LLL   +S++AHLSVDTSLKLM DALEWPTT SL Q   D D D    D +QDPRRSLFWRRVHYYISYGAL+ANRIPCP RSGRPYY
Subjt:  MASK-LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYY

Query:  THNCYKARGPVNPYSRGCTAITRCRR
        THNCYKARGPVNPYSRGC+AITRCRR
Subjt:  THNCYKARGPVNPYSRGCTAITRCRR

A0A1S3VP27 protein RALF-like 344.8e-3262.5Show/hide
Query:  MASKLLLITAALLLSAAAS--AAAHLSV-DTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRP
        MAS L L+T AL L    +     H  + DT L LM DAL+WPTT+SL   Y+D D+D+  + +    RRSLFWRR+ YYISYGAL+ANRIPCP RSGR 
Subjt:  MASKLLLITAALLLSAAAS--AAAHLSV-DTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRP

Query:  YYTHNCYKARGPVNPYSRGCTAITRCRR
        YYTHNCYKARGPV+PYSRGC+ ITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCTAITRCRR

A0A6J1EJN3 protein RALF-like 341.8e-4274.02Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY
        MASKLL     +LL   ++A+AHL VDTSLKLM DALEWPTTIS+       D D D  ++D  QDPRRSLFW RVHYYISYGALAANRIPCP RSGRPY
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQ--QQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY

Query:  YTHNCYKARGPVNPYSRGCTAITRCRR
        YTHNCYKARGPVNPYSRGC+AITRCRR
Subjt:  YTHNCYKARGPVNPYSRGCTAITRCRR

SwissProt top hitse value%identityAlignment
Q0V822 Protein RALF-like 267.0e-0444.44Show/hide
Query:  RRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR
        R+   Y++ G L   R P P     P+ +H  +K R PV+ YSRGC+ ITRCRR
Subjt:  RRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR

Q8L9P8 Protein RALF-like 334.8e-0536.36Show/hide
Query:  LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCY
        + ++T   L +A  S ++   V    K  G   E   + +         +++F  D E + RR L   +   YISYGAL  N +PC +R G  YY  NC 
Subjt:  LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCY

Query:  KARGPVNPYSRGCTAITRCRR
        +     NPYSRGC+AITRCRR
Subjt:  KARGPVNPYSRGCTAITRCRR

Q945T0 Rapid alkalinization factor1.8e-0750Show/hide
Query:  DQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCR
        ++++F  D E + RR L  ++   YISYGAL  N +PC +R G  YY  NC K     NPYSRGC+AITRCR
Subjt:  DQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCR

Q9FHA6 Protein RALF-like 344.1e-2853.23Show/hide
Query:  LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD----PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTH
        LL+  +LL   +   +  LS + SL L+ D  +WP  IS   +++  D ++ +E  E+D     RRSL+WRR  YYISYGAL+ANR+PCP RSGR YYTH
Subjt:  LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD----PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTH

Query:  NCYKARGPVNPYSRGCTAITRCRR
        NC++ARGPV+PYSRGC++ITRCRR
Subjt:  NCYKARGPVNPYSRGCTAITRCRR

Q9LUS7 Rapid alkalinization factor 238.0e-0849.35Show/hide
Query:  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR
        Y   +  + +E   +  RR L  RR   YISYGAL  N IPC +R G  YY  NC +     NPYSRGC+AITRCRR
Subjt:  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 46.5e-0536Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT
        M  K+LLI   L+L+  A      SV+ +  L    +     I       + D+ +   D E + R+    RR   YI Y AL  N +PC +R GR YY 
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYT

Query:  HNCYKARGPVNPYSRGCTAITRCRR
         +C K R   NPY RGC+AIT C R
Subjt:  HNCYKARGPVNPYSRGCTAITRCRR

AT2G33775.1 ralf-like 193.8e-0537.8Show/hide
Query:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISL--QQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY
        M  K+LLI   L L+  A +A                 W  T S    Q    +D +  Y    +  RR L  RR   YISYGAL  N +PC +R GR Y
Subjt:  MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISL--QQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPY

Query:  YTHNCYKARGPVNPYSRGCTAITRCRR
        Y  +C K R   NPY RGC+ IT C R
Subjt:  YTHNCYKARGPVNPYSRGCTAITRCRR

AT3G16570.1 rapid alkalinization factor 235.7e-0949.35Show/hide
Query:  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR
        Y   +  + +E   +  RR L  RR   YISYGAL  N IPC +R G  YY  NC +     NPYSRGC+AITRCRR
Subjt:  YEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPVNPYSRGCTAITRCRR

AT4G15800.1 ralf-like 333.4e-0636.36Show/hide
Query:  LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCY
        + ++T   L +A  S ++   V    K  G   E   + +         +++F  D E + RR L   +   YISYGAL  N +PC +R G  YY  NC 
Subjt:  LLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCY

Query:  KARGPVNPYSRGCTAITRCRR
        +     NPYSRGC+AITRCRR
Subjt:  KARGPVNPYSRGCTAITRCRR

AT5G67070.1 ralf-like 342.9e-2953.23Show/hide
Query:  LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD----PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTH
        LL+  +LL   +   +  LS + SL L+ D  +WP  IS   +++  D ++ +E  E+D     RRSL+WRR  YYISYGAL+ANR+PCP RSGR YYTH
Subjt:  LLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQD----PRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTH

Query:  NCYKARGPVNPYSRGCTAITRCRR
        NC++ARGPV+PYSRGC++ITRCRR
Subjt:  NCYKARGPVNPYSRGCTAITRCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGCTCCTCCTCATCACCGCCGCTCTCCTCCTCTCCGCCGCCGCCTCCGCCGCCGCTCACCTCTCCGTCGACACCTCCCTCAAGCTCATGGGCGACGCGCT
CGAATGGCCAACCACTATCTCCCTACAACAGCAATACGAAGATCAAGATCAAGATCAGTTTTACGAAGATCAAGAACAAGATCCTCGCAGATCTCTCTTCTGGAGGCGAG
TTCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGGATTCCATGTCCGGCGCGCTCCGGCCGCCCTTACTACACGCACAACTGCTACAAGGCTCGCGGTCCGGTC
AATCCCTACTCCCGCGGCTGCACCGCCATTACTCGCTGCCGCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGCTCCTCCTCATCACCGCCGCTCTCCTCCTCTCCGCCGCCGCCTCCGCCGCCGCTCACCTCTCCGTCGACACCTCCCTCAAGCTCATGGGCGACGCGCT
CGAATGGCCAACCACTATCTCCCTACAACAGCAATACGAAGATCAAGATCAAGATCAGTTTTACGAAGATCAAGAACAAGATCCTCGCAGATCTCTCTTCTGGAGGCGAG
TTCACTACTACATTTCCTACGGCGCTCTCGCCGCCAACCGGATTCCATGTCCGGCGCGCTCCGGCCGCCCTTACTACACGCACAACTGCTACAAGGCTCGCGGTCCGGTC
AATCCCTACTCCCGCGGCTGCACCGCCATTACTCGCTGCCGCCGTTGA
Protein sequenceShow/hide protein sequence
MASKLLLITAALLLSAAASAAAHLSVDTSLKLMGDALEWPTTISLQQQYEDQDQDQFYEDQEQDPRRSLFWRRVHYYISYGALAANRIPCPARSGRPYYTHNCYKARGPV
NPYSRGCTAITRCRR