; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013839 (gene) of Chayote v1 genome

Gene IDSed0013839
OrganismSechium edule (Chayote v1)
DescriptionRRM domain-containing protein
Genome locationLG13:23810015..23815154
RNA-Seq ExpressionSed0013839
SyntenySed0013839
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608363.1 RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.7e-10781.07Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYL K+T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D+ 
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI AQESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        ++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSN DD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

KAG7037705.1 RNA-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma]5.3e-10680.41Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKD--TSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQD
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYL K+  T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKD--TSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQD

Query:  SLASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVE
        + A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI AQESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+E
Subjt:  SLASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVE

Query:  AKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        A+++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSN DD R
Subjt:  AKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

XP_022939988.1 RNA-binding protein 2-like [Cucurbita moschata]1.7e-10781.07Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYL K+T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D+ 
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI AQESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        ++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSN DD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

XP_022982403.1 RNA-binding protein 2-like [Cucurbita maxima]3.3e-10881.07Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY AS D AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYLQK+T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D+ 
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI A ESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        ++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSNHDD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]1.2e-10579.84Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPLTSY NSTSID W I PDYLQKDT+S GP AY YTDVGGI NY EPVIG V SG SA GYTSPF+DSL
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        ASQRQ IAV SS G+M MAD  HERA+SL LR AE  P  ++ESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRRSGDKA VLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        +AR  MEALQGYKFDDK PDSP+LKIQFAHFPF LPSNHDD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

TrEMBL top hitse value%identityAlignment
A0A0A0L0S1 RRM domain-containing protein1.6e-10076.83Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRI--PPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQD
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPL SY NSTSID W    PPDY+ +DT+S GP AY YTD+GG   Y EPVIGGV SG SATGY SPF D
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRI--PPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQD

Query:  SLASQRQGIAVDSSLGLMNMADPGHERASSLGL-RNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFV
        SLASQRQ IAV SS G+M  AD GHERA+SL L R AE  P P +ESN+LFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR+GDKA VLCFVEFV
Subjt:  SLASQRQGIAVDSSLGLMNMADPGHERASSLGL-RNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFV

Query:  EAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        EAK ++A MEALQGYKFDDK PDSP LKIQFAHFPFHLPSNHDD R
Subjt:  EAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

A0A5D3D938 RNA-binding protein 2-like isoform X12.8e-10077.78Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRI-PPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDS
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPL SY NSTSID W   PPDY+ +DT+S GP AY YTD+GG   Y EPVIGGV SG+SATGY SPF DS
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRI-PPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDS

Query:  LASQRQGIAVDSSLGLMNMADPGHERASSLG-LRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVE
        LASQRQ IAV SS G+M  AD GHERA+SL  +R AE  P   +ESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRRSGDKATVLCFVEFVE
Subjt:  LASQRQGIAVDSSLGLMNMADPGHERASSLG-LRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVE

Query:  AKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDD
        AK ++A MEALQGYKFDDK PDSPALKIQFAHFPF LPSNHDD
Subjt:  AKHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDD

A0A6J1CBB3 uncharacterized protein LOC1110099336.6e-10278.28Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPL-TSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDS
        MGDDAY+RY ASAD  GSVARS  S+Y+EAPPL TSY N+ SID W  PPDYLQKDT+SSG  AY Y D+G IRNY EPVIGGV SG++A GYTSPF+DS
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPL-TSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDS

Query:  LASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEA
        LASQRQ IAV SS GL+ MAD GHERASSLGLRNAE  PI  +ESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRRSGDKA VLCFVEFVEA
Subjt:  LASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEA

Query:  KHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        K A A M ALQGYKFDDK PDSPALK+ FAHFPF LPSNH+DGR
Subjt:  KHARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

A0A6J1FN25 RNA-binding protein 2-like8.0e-10881.07Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY ASAD AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYL K+T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D+ 
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI AQESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        ++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSN DD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

A0A6J1J4R2 RNA-binding protein 2-like1.6e-10881.07Show/hide
Query:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL
        MGDDAYTRY AS D AGSVARSGLS+Y+EAPPLTSY NSTSIDPWRIPPDYLQK+T SSGP  Y YTDVGGIRNY EPVIGGV SG+SATG TSPF D+ 
Subjt:  MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSL

Query:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK
        A QR  IAV SS GLM MAD GHE+A+SLGLRN E  PI A ESNILFV GLPT+CTRREVGHLFRPF+GYKDI+VVHKEPRR GDKATVLCFVEF+EA+
Subjt:  ASQRQGIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAK

Query:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR
        ++RA MEALQGYKFDDK PDS ALKIQFAHFPF LPSNHDD R
Subjt:  HARAGMEALQGYKFDDKNPDSPALKIQFAHFPFHLPSNHDDGR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A1.9e-2141.74Show/hide
Query:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS
        G +    +G RN     +P+  SN L+V GLP+NC+RREV H+FRPFVGY+++++V K+ +       VLCFV+F     A   + ALQGY+ D+   DS
Subjt:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS

Query:  PALKIQFAHFPFHLP
          L++QF+  P   P
Subjt:  PALKIQFAHFPFHLP

F4HWF9 Nuclear speckle RNA-binding protein B2.6e-2340.94Show/hide
Query:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD
        N  D G  +  S+G    E  P+P   SN L+V GLP+NC+RREV H+FRPFVGY+++++V ++ +      TVLCFV+F  +  A   + ALQ Y+ D+
Subjt:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD

Query:  KNPDSPALKIQFAHFPFHLPSNHDDGR
          PDS  L++QF   P   P      R
Subjt:  KNPDSPALKIQFAHFPFHLPSNHDDGR

G7ID19 RNA-binding protein 28.5e-2245.92Show/hide
Query:  EYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFP
        E  P+P   S+ L+V GLP++ T+REV H+FRPFVGY+++++V KE +  G    +LCFV+F     A   + ALQGYK D+ NP+S  L++QF+  P
Subjt:  EYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFP

Q6JB11 Protein MATERNALLY EXPRESSED GENE 53.6e-2040.68Show/hide
Query:  GIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAG
        G+     +G++ M   G      +G       P+P   S+ L++ GLP NCTRREV H+FRPFVG++++++V+KE R  G    VLCFV+F     A   
Subjt:  GIAVDSSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAG

Query:  MEALQGYKFDDKNPDSPA
        +EALQG+  DD N  +PA
Subjt:  MEALQGYKFDDKNPDSPA

Q8H0P8 RNA-binding protein 12.2e-2247.96Show/hide
Query:  EYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFP
        E A +P   S  L++ GLP++CTRREV H+FRPFVGY+++++V KE +  GD   +LCFV+F     A   + ALQGYK D+ NP+S  L++QF+ +P
Subjt:  EYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.9e-2440.94Show/hide
Query:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD
        N  D G  +  S+G    E  P+P   SN L+V GLP+NC+RREV H+FRPFVGY+++++V ++ +      TVLCFV+F  +  A   + ALQ Y+ D+
Subjt:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD

Query:  KNPDSPALKIQFAHFPFHLPSNHDDGR
          PDS  L++QF   P   P      R
Subjt:  KNPDSPALKIQFAHFPFHLPSNHDDGR

AT1G21320.2 nucleotide binding;nucleic acid binding1.9e-2440.94Show/hide
Query:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD
        N  D G  +  S+G    E  P+P   SN L+V GLP+NC+RREV H+FRPFVGY+++++V ++ +      TVLCFV+F  +  A   + ALQ Y+ D+
Subjt:  NMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDD

Query:  KNPDSPALKIQFAHFPFHLPSNHDDGR
          PDS  L++QF   P   P      R
Subjt:  KNPDSPALKIQFAHFPFHLPSNHDDGR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2241.74Show/hide
Query:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS
        G +    +G RN     +P+  SN L+V GLP+NC+RREV H+FRPFVGY+++++V K+ +       VLCFV+F     A   + ALQGY+ D+   DS
Subjt:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS

Query:  PALKIQFAHFPFHLP
          L++QF+  P   P
Subjt:  PALKIQFAHFPFHLP

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.3e-2241.74Show/hide
Query:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS
        G +    +G RN     +P+  SN L+V GLP+NC+RREV H+FRPFVGY+++++V K+ +       VLCFV+F     A   + ALQGY+ D+   DS
Subjt:  GHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPDS

Query:  PALKIQFAHFPFHLP
          L++QF+  P   P
Subjt:  PALKIQFAHFPFHLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACGATGCTTACACCAGATACATCGCCTCCGCCGATCTAGCAGGAAGTGTAGCGAGGTCTGGCCTTTCAAGTTACACTGAAGCACCTCCTTTAACATCTTACCA
TAATTCGACCTCCATTGATCCTTGGCGCATCCCTCCTGACTATTTGCAAAAAGATACAAGTTCATCAGGACCTGTTGCTTATAGATATACTGACGTTGGAGGCATTAGAA
ATTATTCGGAACCAGTTATTGGCGGTGTGATATCTGGTATGAGTGCAACGGGCTACACATCTCCTTTTCAAGATTCATTGGCAAGTCAAAGACAAGGTATTGCAGTGGAT
AGTAGTCTAGGGCTGATGAATATGGCTGACCCAGGTCACGAAAGGGCCAGTTCTCTTGGTCTTAGAAATGCTGAATATGCTCCCATCCCAGCTCAAGAATCGAACATTCT
TTTCGTTGGTGGACTTCCTACAAATTGTACCAGAAGAGAAGTCGGTCATCTCTTCCGCCCCTTCGTTGGCTATAAAGATATCAAAGTTGTTCACAAGGAGCCCAGACGAA
GCGGAGATAAGGCTACGGTATTGTGCTTTGTAGAGTTCGTTGAAGCAAAACATGCTCGGGCTGGCATGGAAGCTCTGCAAGGTTACAAGTTCGATGACAAAAACCCCGAT
TCCCCAGCTTTGAAGATTCAATTTGCACATTTTCCTTTCCACTTACCATCGAACCATGATGATGGGCGATGA
mRNA sequenceShow/hide mRNA sequence
GGGGAGTAGGACTGTAAGCCGGAGAAAAGAAAAGGGCGTGGGGGAGTGTTGCAGAACAGTCAATCAAGCCATGGGAGACGATGCTTACACCAGATACATCGCCTCCGCCG
ATCTAGCAGGAAGTGTAGCGAGGTCTGGCCTTTCAAGTTACACTGAAGCACCTCCTTTAACATCTTACCATAATTCGACCTCCATTGATCCTTGGCGCATCCCTCCTGAC
TATTTGCAAAAAGATACAAGTTCATCAGGACCTGTTGCTTATAGATATACTGACGTTGGAGGCATTAGAAATTATTCGGAACCAGTTATTGGCGGTGTGATATCTGGTAT
GAGTGCAACGGGCTACACATCTCCTTTTCAAGATTCATTGGCAAGTCAAAGACAAGGTATTGCAGTGGATAGTAGTCTAGGGCTGATGAATATGGCTGACCCAGGTCACG
AAAGGGCCAGTTCTCTTGGTCTTAGAAATGCTGAATATGCTCCCATCCCAGCTCAAGAATCGAACATTCTTTTCGTTGGTGGACTTCCTACAAATTGTACCAGAAGAGAA
GTCGGTCATCTCTTCCGCCCCTTCGTTGGCTATAAAGATATCAAAGTTGTTCACAAGGAGCCCAGACGAAGCGGAGATAAGGCTACGGTATTGTGCTTTGTAGAGTTCGT
TGAAGCAAAACATGCTCGGGCTGGCATGGAAGCTCTGCAAGGTTACAAGTTCGATGACAAAAACCCCGATTCCCCAGCTTTGAAGATTCAATTTGCACATTTTCCTTTCC
ACTTACCATCGAACCATGATGATGGGCGATGAATGCATATTCAACATCTTCGGGAGCTACATGGTCCGAAGGGAATGACAGGTTTTTGGTTGGCACTTTCCTGATATATT
TTTACAAGTAAAGTACCTGCTGATCAATGTGCAGTTTCCTGATTTTTAGAGCCTTTTAGATCTTGTGGAATGGTAAAAGTTCATTCCTGGACTTAATCAGTTTCTTTTGT
AGTTTAACAACCGGGGTGGGGGATTCAAATCCATCACTTCTTGACCATTTACACACACTGAGATAGTTGTTGACAAAATGGTGGTTTTTTGTTCTTCATGAGCACATGGA
TGAGAACCCAACAAGCTCCTCCCTCCCTTTACTAGTAAAAAAAACAAATTATGGGCAGTTTCCAATTCCTGATTGGTATTGGTATCAATCAGTGTGACTTTGACTTTGGT
GTCTTTTTGGACTAACAAGTAGTTGTCACTAGTCAGATAGCTTCTTACTCTTGTTCTGTCTCTGTAGGCTTCAGACATCTTCTGCTTTGGATCATGAAAATGACATATAG
GTACAAAGATTCCTTACTGTGGTAATAAACTTTGTGGGAATGAAACCATCATTAATTGACCCAAGTGGTAAAAAAAGGTATCAAATATTTCAGAGGTCCTGGGTTCAATT
TATAATGATCACCTACCTAAGAAATAATTTCCTATGGATTTCCTTGATATTCAATTGTTGTAAGTTCAGACGATATGTGTCGTGAGAGTAGTTGAGGTGCGCACTCGGGT
GTGTTTGTTTTTAGTAGAAGAAGAGTGGTGAATTGACCCTAGTGGTAAAAAAAGGTATCGAATATTCAAGAGGTCCTGAGTTCAATTCATAATGATCACCTACCTAAGAA
ATAATTTCTTATTGATTTCCTTGATATCCAATTGTTGTAAGACCAGACGATACGTGTCGTGAGAGTAGTTGAGGTGCGCACTCGGGTGTGTTTGTTTCTGGTAGAAGAAG
AGTGGTAAACAATCACTCTTCTAGAACCCTTTGTTTGTATTTGTTGGTAGACAACCACCCATCAAACCCTTCATCAAACCCCACATCAAAATCATCACTCGACCACTACG
AGTACTAATCTCTAAATGAGTAGTTGATTACTCTGATCACTACTTATTAGAGATAATACAAGCTTCCACCTCAAAATCAATTGGTAGTGAGAACAGTAGGTCATATCTCT
TATAAAGATGTTGAAGACTTTTCATCTTTTCAATGTGAAACAAAGATCAGGAGGTGAGTATCTCCAACACTGCTAACACTAATTCCCAAATGAGTAATTAATTACTCCAG
CTAATGCTTACATCAATTCCCAAATGAGTAGTTAAATACCTCAACTACCATTAACCCTTCCACTCCAGTCCACTCCACTCCACTACAGTATTTGTACCAAATCCATAAAA
AGATTATGTAAAAATAAAAAAATAAAAATAAACTTCATGTGAATGAAGACTATGTTTGCATAAAACCAACCACCCCCACTGAAAAAAGAAACAACCAAGGGTAGGGGAGA
TTGACAAAATATGGTATTTCTGTGGCTGTGAATGTATAACATATGTGAATGCATATAATCTTTGTGTTGAGAATAATTAAGTTATAGAGAGAAAGGGAGGGGAAGGAGTC
AAACATAGATTGCATTTTTTTCAAGCTTGTGGGGTTTGAAAGCATGAAATTGCCCATCACAGGAGGTACAGCCTACAGACAATAGACCAATTAATTCCTTAATTGACTTT
TTCTACTGGAACGATCTGGTGGGGGCTGGGTGTGTATTGTTGAAGCCTGCAAGCCATGTTTTTTTACATTGTTTTCTTAGACAAGTTTGAAGGTCGTTTTATATCATTAT
TTGCTGATCTTTTGAATTGTTTTATTGTTTTTTTGAGTGAATTATAAATTTGGAAAGTTAGAATTTAATCTCTTTAAAGTGTTTGGATGAGGAGTTAGTTTGAATGAGGA
ATTAGTTTGAAGAGTTATTTTGAGTAGTTATTGAGATTTTTGTAATAGTTTGTTTGGATGTAGATTTTTATGGAAG
Protein sequenceShow/hide protein sequence
MGDDAYTRYIASADLAGSVARSGLSSYTEAPPLTSYHNSTSIDPWRIPPDYLQKDTSSSGPVAYRYTDVGGIRNYSEPVIGGVISGMSATGYTSPFQDSLASQRQGIAVD
SSLGLMNMADPGHERASSLGLRNAEYAPIPAQESNILFVGGLPTNCTRREVGHLFRPFVGYKDIKVVHKEPRRSGDKATVLCFVEFVEAKHARAGMEALQGYKFDDKNPD
SPALKIQFAHFPFHLPSNHDDGR