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Sed0013861 (gene) of Chayote v1 genome

Gene IDSed0013861
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1863371..1863907
RNA-Seq ExpressionSed0013861
SyntenySed0013861
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022947571.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]2.8e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LL HAEEEFGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

XP_023007091.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]3.7e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LL HAEEEFGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

XP_023512611.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]4.8e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI  LS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEE+FGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

XP_023533292.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]3.7e-4288.66Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LL HAEEEFGFHHP GGLTIPCKEDAF+DLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

XP_031736841.1 auxin-responsive protein SAUR24-like [Cucumis sativus]6.3e-4288.66Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MG  LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQLL HAEEEFGFHHPHGGLTIPCKEDAF+DLTSRLQV+
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

TrEMBL top hitse value%identityAlignment
A0A0A0LPI0 Uncharacterized protein3.0e-4288.66Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MG  LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRFVVPISYLN PSFQQLL HAEEEFGFHHPHGGLTIPCKEDAF+DLTSRLQV+
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

A0A6J1FVI4 auxin-responsive protein SAUR24-like3.0e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI  LS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEE+FGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

A0A6J1G6T7 auxin-responsive protein SAUR24-like1.4e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ+LL HAEEEFGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

A0A6J1JHE3 auxin-responsive protein SAUR24-like3.0e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI  LS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLL HAEE+FGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

A0A6J1KZJ6 auxin-responsive protein SAUR24-like1.8e-4289.69Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        MGI LLS +P AKQILKMQSGFTK QL VPKGHVAVYVGEIQRKRF+VPISYLNHPSFQ LL HAEEEFGFHHP GGLTIPCKEDAFIDLTSRLQVS
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR233.4e-2261.45Show/hide
Query:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRL
        AK+IL   +         PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSRL
Subjt:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR228.9e-2363.29Show/hide
Query:  KMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        K+ S  T      PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +E+EFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  KMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR203.1e-2357.78Show/hide
Query:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        ++F+       K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.2e-2256.67Show/hide
Query:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        ++F+       K+ S  T      PKG +AVYVGE Q+KR++VP+SYL+ PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR241.8e-2363.1Show/hide
Query:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.8e-2658.16Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS
        M I +   +  +KQ+LK  S  +   + +PKGH+AVYVGE +Q++RFVVP++YL+HP FQ+LLR AEEEFGF HP GGLTIPC E  FIDL SRL  S
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGE-IQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS

AT4G34810.1 SAUR-like auxin-responsive protein family2.0e-2556.19Show/hide
Query:  MGIPLLSFIPQAKQILKMQSGFTKCQLG------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDL-
        MG+   +     KQILK+ S   + +        VPKGHVAVYVG   E+++KRFVVPIS+LNHPSF++ L  AEEEFGF+HP GGLTIPC+E+ F+DL 
Subjt:  MGIPLLSFIPQAKQILKMQSGFTKCQLG------VPKGHVAVYVG---EIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDL-

Query:  TSRLQ
         SRLQ
Subjt:  TSRLQ

AT4G38840.1 SAUR-like auxin-responsive protein family8.8e-2658.76Show/hide
Query:  MGIPLLSFIPQAKQILK----MQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSR
        M I +   +  +KQIL+    + S  +   L VPKG++AVYVGE   KRFVVP+SYL+ PSFQ LLR AEEEFGF HP GGLTIPC E+ FIDL SR
Subjt:  MGIPLLSFIPQAKQILK----MQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family2.2e-2457.78Show/hide
Query:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        ++F+       K+ S  T      PKG +AVYVGE Q+KR++VPISYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSR Q
Subjt:  LSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2463.1Show/hide
Query:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ
        AK+IL   +G        PKG +AVYVGE Q+KR++VP+SYLN PSFQ LL  +EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATTCCATTGCTATCCTTTATTCCTCAAGCCAAGCAAATTCTAAAGATGCAGTCAGGTTTCACTAAATGTCAGTTGGGTGTACCAAAAGGCCATGTGGCTGTTTA
TGTAGGCGAGATCCAAAGGAAGCGATTCGTGGTTCCGATATCGTACTTAAATCATCCATCATTCCAACAGCTACTCCGCCACGCAGAGGAAGAGTTTGGCTTCCATCATC
CACATGGGGGTCTAACAATTCCTTGCAAGGAAGATGCCTTCATTGATCTCACTTCTAGATTGCAAGTATCTTGA
mRNA sequenceShow/hide mRNA sequence
TTCCAGTTGGTTCCATACTCATCAGATCAAAGCTTTAGACCTTTCTAACAGTCCTTTATCTTGAGAAAATGGGGATTCCATTGCTATCCTTTATTCCTCAAGCCAAGCAA
ATTCTAAAGATGCAGTCAGGTTTCACTAAATGTCAGTTGGGTGTACCAAAAGGCCATGTGGCTGTTTATGTAGGCGAGATCCAAAGGAAGCGATTCGTGGTTCCGATATC
GTACTTAAATCATCCATCATTCCAACAGCTACTCCGCCACGCAGAGGAAGAGTTTGGCTTCCATCATCCACATGGGGGTCTAACAATTCCTTGCAAGGAAGATGCCTTCA
TTGATCTCACTTCTAGATTGCAAGTATCTTGAAGGATGCAGCAGAATGGGCAATCTCTCTTCTTTTTTTTATATATAAATTTTCTCATTCTTTTTTACTCATTTACTTTT
TGACACATGCTAGTGTGTTGTGAATAGGGAAGTCTTCCTACCTGTAAATGAGTTGCATTGTCAAGGAACATTTACCAACAGGATTAATGAAAAAAAT
Protein sequenceShow/hide protein sequence
MGIPLLSFIPQAKQILKMQSGFTKCQLGVPKGHVAVYVGEIQRKRFVVPISYLNHPSFQQLLRHAEEEFGFHHPHGGLTIPCKEDAFIDLTSRLQVS