; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013882 (gene) of Chayote v1 genome

Gene IDSed0013882
OrganismSechium edule (Chayote v1)
DescriptionNuclear pore complex protein NUP35
Genome locationLG07:11073411..11077248
RNA-Seq ExpressionSed0013882
SyntenySed0013882
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0051028 - mRNA transport (biological process)
GO:0031965 - nuclear membrane (cellular component)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0044615 - nuclear pore nuclear basket (cellular component)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0005543 - phospholipid binding (molecular function)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR007846 - RNA-recognition motif (RRM) Nup35-type domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR017389 - Nucleoporin, NUP53
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051033.1 nuclear pore complex protein NUP35 [Cucumis melo var. makuwa]2.0e-16488.99Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWS SKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ LDEKL+NPGFMVIPPVSSRTSELL ++GP R Y LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

XP_004141656.1 nuclear pore complex protein NUP35 [Cucumis sativus]3.4e-16488.99Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPISGQQSRQGSAGF+WWS SKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ L+E+L+NPGFMVIPPVSSRTSELL ++GP R Y LQNG +
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

XP_008462444.1 PREDICTED: nuclear pore complex protein NUP35 [Cucumis melo]1.3e-16388.69Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWS SKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ LDEKL+NPGFMVIPPVSSRTSELL ++GP   Y LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

XP_022151212.1 nuclear pore complex protein NUP35 [Momordica charantia]7.8e-16990.83Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        T+ RTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPE GIPDYPLSPEIK+DPRTP+QSHDFSSPMK
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTP SGQQSRQGSAGF+WWS SKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEV RNC PAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVK VDPMHRQ LDEK++NPGFMVIPPV SRT+ELL ++GP RTY LQNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        N RQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

XP_038900103.1 nuclear pore complex protein NUP35 [Benincasa hispida]7.0e-17091.82Show/hide
Query:  MNT-VRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSS
        MNT V RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPE GI DYP+SPEIK+DPRTP+QSHDFSS
Subjt:  MNT-VRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSS

Query:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNL
        P+KNKSNASTSYTPISGQQSRQGSAGF+WWS SKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLPA KLNEEEWVTVYGFSPADTNL
Subjt:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQN
        VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAH+ALNKNGIQINGVLIVGVK VDPMHRQ LDEKL++PGFMV PPVSSRTSELL ++G  R Y LQN
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQN

Query:  GNSNGRQSGGTIASPSKSLVSKVMDLMFGV
        GNS+ RQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  GNSNGRQSGGTIASPSKSLVSKVMDLMFGV

TrEMBL top hitse value%identityAlignment
A0A0A0K7B2 Nuclear pore complex protein NUP351.6e-16488.99Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPISGQQSRQGSAGF+WWS SKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ L+E+L+NPGFMVIPPVSSRTSELL ++GP R Y LQNG +
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

A0A1S3CH09 Nuclear pore complex protein NUP356.2e-16488.69Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWS SKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ LDEKL+NPGFMVIPPVSSRTSELL ++GP   Y LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

A0A5A7U592 Nuclear pore complex protein NUP359.6e-16588.99Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RTPNSG +SLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRS SDFSPE GIPDYP+SPE K+DPRTP++ HDFSSP K
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTPI+GQ SRQGSAGF+WWS SKGGGSE+EDKGKSSPVEGVIQPGALITLPTPREVARPEV RNCLP  KLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKH+PGPRDANWMHILYQNRSDA KALNKNGIQINGVLIVGVK VDPMHRQ LDEKL+NPGFMVIPPVSSRTSELL ++GP R Y LQNGN+
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        + R SGG IASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1DCV4 Nuclear pore complex protein NUP353.8e-16990.83Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        T+ RTPNSGRQS+FYQDLASPVT+RKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDR  SDFSPE GIPDYPLSPEIK+DPRTP+QSHDFSSPMK
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        NKSNASTSYTP SGQQSRQGSAGF+WWS SKGGGSEQEDKGKSSPVEG +QPGALI LPTPREVARPEV RNC PAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNG+QINGVLIVGVK VDPMHRQ LDEK++NPGFMVIPPV SRT+ELL ++GP RTY LQNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGGTIASPSKSLVSKVMDLMFGV
        N RQSGGTIASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGGTIASPSKSLVSKVMDLMFGV

A0A6J1JYW9 Nuclear pore complex protein NUP353.8e-16187.8Show/hide
Query:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK
        TV RT NSGRQSLFYQDLASPV+TR+GKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPE GIPDYP+SPE+K+DP TP+QSHDFSSPMK
Subjt:  TVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMK

Query:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        +KSNASTS+TPIS QQSRQ SAGF+WWS  KGGGSEQEDKGKSSPVEGVIQPGALITL TPREVARPEV RNCLPAGKLNEEEWVTVYGFSPADTNLVLR
Subjt:  NKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS
        EFEKCGEILKHVPGPRDANWMHILY+NRS AHKAL+KNGIQING+LIVGVK VDP+ RQTLDEKL+NPGFMV+PPVSSRT+EL    GP R Y  QNGNS
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTY-LQNGNS

Query:  NGRQSGG-TIASPSKSLVSKVMDLMFGV
          RQSGG TIASPSKSLVSKVMDLMFGV
Subjt:  NGRQSGG-TIASPSKSLVSKVMDLMFGV

SwissProt top hitse value%identityAlignment
O04326 Nuclear pore complex protein NUP351.0e-11867.99Show/hide
Query:  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQS--HDFSSPMKN
        RTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPE GI DY  SP+ K+D RTP QS   +  +P K 
Subjt:  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQS--HDFSSPMKN

Query:  KSNASTSYTPISGQQSRQGSAGFNWWSASKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        K  AS S++ ++ QQS+Q S   +WWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEV R  +P G L+EEEWVTVYGFSP DTNLVLR
Subjt:  KSNASTSYTPISGQQSRQGSAGFNWWSASKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSS-RTSELLLSKGPARTYLQNGNS
        EFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVK VDP+ +Q L+E+L+N GFM +PP SS R +   LS+     YLQNG++
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSS-RTSELLLSKGPARTYLQNGNS

Query:  NGRQ-SGGTIASPSKSLVSKVMDLMFGV
           Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  NGRQ-SGGTIASPSKSLVSKVMDLMFGV

Q66IJ0 Nucleoporin NUP356.1e-1527.43Show/hide
Query:  PNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFS---S
        P++G Q L      D+ +PV        TP Q  ++  +  R    +   PP PV  T +D+SG+   P   I D   SP + + P  P ++  FS   +
Subjt:  PNSGRQSL---FYQDLASPVTTRKGKFSTPGQAAAVSAL-WRENFGNSDLPPPPVF-TLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFS---S

Query:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNL
        P+     +S     ISG + R  S+ F   S +  G S +                   T  +P ++       + L +    ++ WVTV+GF  A  + 
Subjt:  PMKNKSNASTSYTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNL

Query:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNP--GFMVIPPV--------SSRTSELLLSK
        +L +F + G I+KHV    + NWMHI YQ++  A KAL+K+G      +++GVK           EK+S P    +  PPV        S  T      +
Subjt:  VLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNP--GFMVIPPV--------SSRTSELLLSK

Query:  GPARTYLQNGNSNGRQSGGTIA-SPSKSLVSKVMDLMFG
          A TY    +++ +      A    +S+VSK M+ MFG
Subjt:  GPARTYLQNGNSNGRQSGGTIA-SPSKSLVSKVMDLMFG

Q68FY1 Nucleoporin NUP358.8e-1428.5Show/hide
Query:  SPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLN---------------EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNR
        SP+ GV  P    ++ +P  + +P   +  L   +L+               ++ WVTV+GF  A  + +L +F + G ILKHV      NWMHI YQ++
Subjt:  SPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLN---------------EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNR

Query:  SDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDE-KLSNPGFMVIPPVSS--------RTSELLLSKGPARTYLQNGNSNGRQSGGTIASPSKSLVSK
          A KAL+K+G      +++GVK  +D    +  D   LS+P     PP+ +         T  +   +  A  Y  + +     S        +SLVS+
Subjt:  SDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDE-KLSNPGFMVIPPVSS--------RTSELLLSKGPARTYLQNGNSNGRQSGGTIASPSKSLVSK

Query:  VMDLMFG
         M+ MFG
Subjt:  VMDLMFG

Q6P6X9 Nucleoporin NUP358.8e-1431.37Show/hide
Query:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDEKLSNPGFMVIPPVSS-
        ++ W+TV+GF PA  + +L +F + G ILKHV      NWMH+ YQ++  A KAL+K+G      +++GVK  +D    ++LD K S    +  PPV + 
Subjt:  EEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDEKLSNPGFMVIPPVSS-

Query:  ------RTSELLLSKGPARTYLQNGNSNGRQSGGTIASPSKSLVSKVMDLMFG
               ++   + +  +  Y  + +     S        +S VSK M+ MFG
Subjt:  ------RTSELLLSKGPARTYLQNGNSNGRQSGGTIASPSKSLVSKVMDLMFG

Q8NFH5 Nucleoporin NUP355.5e-1627.27Show/hide
Query:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMKNKSNASTSYTPISGQQ
        DL +PVT +    S  G +  V  +          P P V   +D+SG+   P   I D   SP + + P T           + + N S   +P+ G  
Subjt:  DLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMKNKSNASTSYTPISGQQ

Query:  SRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR
        S  G+    +  AS G            P +  + P  L    T  +    E H          ++ WVTV+GF  A  + +L +F + G ILKHV    
Subjt:  SRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPR

Query:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDE-KLSNPGFMVIPPVSS--------RTSELLLSKGPARTYLQNGNSNGRQSGG
          NWMHI YQ++  A KAL+K+G      +++GVK  +D    ++ D   LS+P     PP+ +         T  +   +  A  Y  + +     S  
Subjt:  DANWMHILYQNRSDAHKALNKNGIQINGVLIVGVK-SVDPMHRQTLDE-KLSNPGFMVIPPVSS--------RTSELLLSKGPARTYLQNGNSNGRQSGG

Query:  TIASPSKSLVSKVMDLMFG
              +SLVSK M+ MFG
Subjt:  TIASPSKSLVSKVMDLMFG

Arabidopsis top hitse value%identityAlignment
AT3G16310.1 mitotic phosphoprotein N' end (MPPN) family protein7.1e-12067.99Show/hide
Query:  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQS--HDFSSPMKN
        RTP SGRQSL +QDLASPV+ R+GKFS+PGQAAAVSALWRENFG SDLPPPP++TL+DR  SDFSPE GI DY  SP+ K+D RTP QS   +  +P K 
Subjt:  RTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQS--HDFSSPMKN

Query:  KSNASTSYTPISGQQSRQGSAGFNWWSASKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR
        K  AS S++ ++ QQS+Q S   +WWS SK G S EQ+DKGK SPVEGV+QPGAL+TLP PREVARPEV R  +P G L+EEEWVTVYGFSP DTNLVLR
Subjt:  KSNASTSYTPISGQQSRQGSAGFNWWSASKGGGS-EQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLR

Query:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSS-RTSELLLSKGPARTYLQNGNS
        EFEKCG +LKHVPGPR+ANWMHILYQNRSDAHKALNK G+ INGV+IVGVK VDP+ +Q L+E+L+N GFM +PP SS R +   LS+     YLQNG++
Subjt:  EFEKCGEILKHVPGPRDANWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSS-RTSELLLSKGPARTYLQNGNS

Query:  NGRQ-SGGTIASPSKSLVSKVMDLMFGV
           Q SGG +ASPSKS+VSK  DLMFGV
Subjt:  NGRQ-SGGTIASPSKSLVSKVMDLMFGV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACACTGTTCGTAGAACCCCCAATTCTGGGAGGCAGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACTACGCGAAAAGGGAAATTTTCAACTCCAGGTCAGGC
AGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGAAACTCGGATCTTCCTCCTCCTCCTGTTTTTACCTTGGAAGATCGTTCGGGCTCAGATTTTTCTCCTGAGTATG
GGATTCCCGATTATCCTCTTTCCCCAGAAATTAAAACAGACCCAAGGACCCCTATGCAAAGTCATGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGTACTTCA
TACACACCTATCAGTGGTCAACAAAGCCGGCAGGGATCAGCTGGCTTTAATTGGTGGTCAGCATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAGGGAAAAAGTTCGCC
AGTTGAGGGTGTGATTCAACCTGGTGCATTAATCACACTTCCGACCCCAAGAGAAGTTGCCAGACCGGAGGTGCATAGGAATTGCTTGCCTGCTGGAAAACTCAATGAGG
AGGAATGGGTTACTGTGTATGGATTCTCCCCTGCTGATACAAATCTAGTTTTGAGGGAATTTGAAAAATGTGGCGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCT
AATTGGATGCACATTCTTTACCAGAACCGATCTGATGCCCACAAGGCTCTCAACAAAAATGGCATTCAAATTAATGGGGTACTAATTGTTGGTGTGAAATCAGTGGACCC
AATGCACAGGCAGACACTAGATGAAAAGTTAAGTAATCCTGGATTTATGGTTATCCCACCCGTATCTTCTCGAACCTCAGAACTCCTTCTATCAAAAGGACCTGCGCGTA
CCTACCTCCAAAATGGTAACAGTAATGGACGGCAGTCAGGCGGTACCATTGCTTCGCCATCGAAATCGTTAGTGTCCAAGGTCATGGATTTGATGTTTGGAGTCTAG
mRNA sequenceShow/hide mRNA sequence
CGAACACAAATAGCACCGCGAAATCGTATTCCTCAGTGGACGAAGTTGAGGTTTAGGGTTTCAAATTCCAAAATCTTTTCGTCCCAAACGGAAAATCAAATTTTCGAGCC
TCGAATCCAATCCTTCAGTTCGAAGCAGAGCTCGGCCACTTTCTGAAGTTGAGTTATCTTTCTCTTCTAAGCCATGAACACTGTTCGTAGAACCCCCAATTCTGGGAGGC
AGTCATTGTTCTATCAAGATTTAGCATCTCCTGTTACTACGCGAAAAGGGAAATTTTCAACTCCAGGTCAGGCAGCTGCTGTATCTGCTTTATGGCGGGAGAATTTTGGA
AACTCGGATCTTCCTCCTCCTCCTGTTTTTACCTTGGAAGATCGTTCGGGCTCAGATTTTTCTCCTGAGTATGGGATTCCCGATTATCCTCTTTCCCCAGAAATTAAAAC
AGACCCAAGGACCCCTATGCAAAGTCATGACTTCTCTTCACCGATGAAAAACAAGTCAAATGCCAGTACTTCATACACACCTATCAGTGGTCAACAAAGCCGGCAGGGAT
CAGCTGGCTTTAATTGGTGGTCAGCATCAAAAGGTGGTGGCAGTGAGCAAGAAGATAAGGGAAAAAGTTCGCCAGTTGAGGGTGTGATTCAACCTGGTGCATTAATCACA
CTTCCGACCCCAAGAGAAGTTGCCAGACCGGAGGTGCATAGGAATTGCTTGCCTGCTGGAAAACTCAATGAGGAGGAATGGGTTACTGTGTATGGATTCTCCCCTGCTGA
TACAAATCTAGTTTTGAGGGAATTTGAAAAATGTGGCGAGATCTTGAAACACGTTCCTGGTCCAAGAGATGCTAATTGGATGCACATTCTTTACCAGAACCGATCTGATG
CCCACAAGGCTCTCAACAAAAATGGCATTCAAATTAATGGGGTACTAATTGTTGGTGTGAAATCAGTGGACCCAATGCACAGGCAGACACTAGATGAAAAGTTAAGTAAT
CCTGGATTTATGGTTATCCCACCCGTATCTTCTCGAACCTCAGAACTCCTTCTATCAAAAGGACCTGCGCGTACCTACCTCCAAAATGGTAACAGTAATGGACGGCAGTC
AGGCGGTACCATTGCTTCGCCATCGAAATCGTTAGTGTCCAAGGTCATGGATTTGATGTTTGGAGTCTAGGTTAGCTCCTTTTTCGGTATCGATTTTCTGTGGTAAGATA
TTCTTAAAAATTTGAGAGCCTACACATTGATTAGGCCTGTTGTAACTGTGTACAATGTTCACAGTCCTTAATTCTGATACTTGTGATTGTTTTTATTTGTTTGTTTTTTT
GTTTTTTTGTTTTTTTTTCTGATTCTTACTCTTACAAAATGAGACAAGGAAATGAACATGATGGTGGAAATCTTTTTTACTTTTTAGGCCCTTAAAAACCAGCAAATATG
GGAACCGGGTATGTGGTATATTCCTGTGTCCCCTTTGTTGAGACTGCTTTTGTGCATCATCTTCAACCCAACAAGTCTAGTGGGAATGACAATAGGTTGAAATTCCTATC
CTCGTGTATCATTCTTTGTTTTTGGCAAATTGGAGATGGTTCAGGAATAGTTTGC
Protein sequenceShow/hide protein sequence
MNTVRRTPNSGRQSLFYQDLASPVTTRKGKFSTPGQAAAVSALWRENFGNSDLPPPPVFTLEDRSGSDFSPEYGIPDYPLSPEIKTDPRTPMQSHDFSSPMKNKSNASTS
YTPISGQQSRQGSAGFNWWSASKGGGSEQEDKGKSSPVEGVIQPGALITLPTPREVARPEVHRNCLPAGKLNEEEWVTVYGFSPADTNLVLREFEKCGEILKHVPGPRDA
NWMHILYQNRSDAHKALNKNGIQINGVLIVGVKSVDPMHRQTLDEKLSNPGFMVIPPVSSRTSELLLSKGPARTYLQNGNSNGRQSGGTIASPSKSLVSKVMDLMFGV