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Sed0013894 (gene) of Chayote v1 genome

Gene IDSed0013894
OrganismSechium edule (Chayote v1)
Description11 kDa late embryogenesis abundant protein-like
Genome locationLG12:9027551..9029992
RNA-Seq ExpressionSed0013894
SyntenySed0013894
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0009628 - response to abiotic stimulus (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK25405.1 18 kDa seed maturation protein [Cucumis melo var. makuwa]1.3e-2475.49Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG----PTTG
        MQSGRNAAE+VKESAANVGASAKAGMEKTKATAQEKVD MRA    EK+M RE+K+ER+ EA+LDKQ+AR EH A+RQAGTGP TR GLGTG    PT  
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG----PTTG

Query:  TR
        TR
Subjt:  TR

XP_022940345.1 11 kDa late embryogenesis abundant protein-like [Cucurbita moschata]5.9e-2573.21Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAG--TGPVTRVGLGTGPTTGTR
        MQSG+NAAESVKESAANVGASA+AGMEKTKATAQEKVD MRA   LEKDMA ERKEERLH AELDKQ+ARAEH  +RQA   TG  T +  GTG  TGTR
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAG--TGPVTRVGLGTGPTTGTR

Query:  TTYDLTIDGANR
          YD T+ G +R
Subjt:  TTYDLTIDGANR

XP_022971427.1 11 kDa late embryogenesis abundant protein-like [Cucurbita maxima]1.0e-2472.97Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-
        MQSG+NAAESVKESAANVGASA+AGMEKTKATAQEKVD MRA   LEKDMA ERKEERLH AELDKQ+ARAEH A+RQA     ++ G  TG TTGT T 
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-

Query:  TYDLTIDGANR
         YD T+ G +R
Subjt:  TYDLTIDGANR

XP_031737964.1 11 kDa late embryogenesis abundant protein-like [Cucumis sativus]1.4e-2674.77Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT
        MQSGRNAAE++KESAANVGASAKAGMEKTKATAQEKVD MRA    EKDMARERK+ER+ EAELDKQ+AR EH A+RQ GTGP TR GLGTG       T
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT

Query:  YDLTIDG
        YD T+ G
Subjt:  YDLTIDG

XP_038905932.1 11 kDa late embryogenesis abundant protein-like [Benincasa hispida]1.5e-2879.25Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-
        MQSGRNAAE+ KESAANVGASAKAGMEK KA+AQEKVD MRA   +EKDMARERKEER+ EAELDKQ+ARAEH A RQ GTGP TRVGLGTG  TGT T 
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-

Query:  TYDLTI
        TYD T+
Subjt:  TYDLTI

TrEMBL top hitse value%identityAlignment
A0A0A0LBV1 Uncharacterized protein6.8e-2774.77Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT
        MQSGRNAAE++KESAANVGASAKAGMEKTKATAQEKVD MRA    EKDMARERK+ER+ EAELDKQ+AR EH A+RQ GTGP TR GLGTG       T
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT

Query:  YDLTIDG
        YD T+ G
Subjt:  YDLTIDG

A0A5D3DPJ3 18 kDa seed maturation protein6.4e-2575.49Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG----PTTG
        MQSGRNAAE+VKESAANVGASAKAGMEKTKATAQEKVD MRA    EK+M RE+K+ER+ EA+LDKQ+AR EH A+RQAGTGP TR GLGTG    PT  
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG----PTTG

Query:  TR
        TR
Subjt:  TR

A0A6J1DVT9 11 kDa late embryogenesis abundant protein-like1.7e-2270.87Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPV----TRVGLGTGPTTG
        MQSGRNAAES KESAANVGA+A+AGM+KTKATAQEKVD MRA   +EKDMA  RKEER+ EAE++KQ+ARA H A+RQAGTG +    T  G G GPTTG
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPV----TRVGLGTGPTTG

Query:  TRT
        T T
Subjt:  TRT

A0A6J1FQA5 11 kDa late embryogenesis abundant protein-like2.9e-2573.21Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAG--TGPVTRVGLGTGPTTGTR
        MQSG+NAAESVKESAANVGASA+AGMEKTKATAQEKVD MRA   LEKDMA ERKEERLH AELDKQ+ARAEH  +RQA   TG  T +  GTG  TGTR
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAG--TGPVTRVGLGTGPTTGTR

Query:  TTYDLTIDGANR
          YD T+ G +R
Subjt:  TTYDLTIDGANR

A0A6J1I1X4 11 kDa late embryogenesis abundant protein-like4.9e-2572.97Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-
        MQSG+NAAESVKESAANVGASA+AGMEKTKATAQEKVD MRA   LEKDMA ERKEERLH AELDKQ+ARAEH A+RQA     ++ G  TG TTGT T 
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRT-

Query:  TYDLTIDGANR
         YD T+ G +R
Subjt:  TYDLTIDGANR

SwissProt top hitse value%identityAlignment
P09441 Late embryogenesis abundant protein D-1139.8e-0751.81Show/hide
Query:  ESAANVGASAKAGMEKTKATAQEKVDNMRAL---EKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTT
        +S  +  ASAKAGMEK KA+ QEKVD M+     EK+MARERKEER  +AEL KQ AR  +      G G +     GTG TT
Subjt:  ESAANVGASAKAGMEKTKATAQEKVDNMRAL---EKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTT

P46515 11 kDa late embryogenesis abundant protein5.8e-1557Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT
        MQSG+NAA S KE+AANV ASAKAGMEKTKA+ QEK + M A   ++K+MARE+KEER HEAE +KQ A+  + AQ+Q      T +G GT   T T  T
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTT

Q00747 Protein LE251.4e-0542.16Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQ-AGTGPVTRVGLGTGPTTGTRT
        MQ+G++AA           ++AKAGMEKTKA  QEK + M     L+K+MA E+KE+R+  AE+ K+ A+A+H A++Q A T      G G    TG  T
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQ-AGTGPVTRVGLGTGPTTGTRT

Query:  TY
        T+
Subjt:  TY

Q01417 18 kDa seed maturation protein5.4e-1350.98Show/hide
Query:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLG---TGPTTGT
        MQ G+ A ES+KE+A N+GASAKAGMEKTKAT QEK + M A   ++K++A ++KE ++++AELDKQ AR  + A +Q+ T     +G G   TG  TGT
Subjt:  MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLG---TGPTTGT

Query:  RT
         T
Subjt:  RT

Q9FG31 Late embryogenesis abundant protein 462.6e-0743.33Show/hide
Query:  ESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG--PTTG
        +S+KE+A+N+ ASAK+GM+KTKAT +EK + M+    ++K MA + KE+++++AE+ K+  R +H A  +   G  T +GLGT    TTG
Subjt:  ESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG--PTTG

Arabidopsis top hitse value%identityAlignment
AT5G06760.1 Late Embryogenesis Abundant 4-51.8e-0843.33Show/hide
Query:  ESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG--PTTG
        +S+KE+A+N+ ASAK+GM+KTKAT +EK + M+    ++K MA + KE+++++AE+ K+  R +H A  +   G  T +GLGT    TTG
Subjt:  ESVKESAANVGASAKAGMEKTKATAQEKVDNMRA---LEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTG--PTTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGGGAAGGAACGCCGCGGAATCGGTTAAAGAATCGGCGGCTAATGTTGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACTGCTCAGGAAAAGGT
GGACAACATGAGAGCATTGGAGAAGGACATGGCGAGGGAAAGAAAAGAGGAGCGGCTTCACGAGGCTGAGCTGGACAAGCAACGAGCACGTGCAGAACACGAGGCACAGA
GGCAAGCTGGTACGGGCCCTGTGACTCGTGTTGGGTTAGGCACCGGTCCGACCACGGGGACTCGAACCACTTATGATCTGACGATAGACGGTGCCAACCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGGGAAGGAACGCCGCGGAATCGGTTAAAGAATCGGCGGCTAATGTTGGAGCCTCTGCCAAAGCTGGCATGGAAAAAACCAAAGCCACTGCTCAGGAAAAGGT
GGACAACATGAGAGCATTGGAGAAGGACATGGCGAGGGAAAGAAAAGAGGAGCGGCTTCACGAGGCTGAGCTGGACAAGCAACGAGCACGTGCAGAACACGAGGCACAGA
GGCAAGCTGGTACGGGCCCTGTGACTCGTGTTGGGTTAGGCACCGGTCCGACCACGGGGACTCGAACCACTTATGATCTGACGATAGACGGTGCCAACCGTTGA
Protein sequenceShow/hide protein sequence
MQSGRNAAESVKESAANVGASAKAGMEKTKATAQEKVDNMRALEKDMARERKEERLHEAELDKQRARAEHEAQRQAGTGPVTRVGLGTGPTTGTRTTYDLTIDGANR