; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013902 (gene) of Chayote v1 genome

Gene IDSed0013902
OrganismSechium edule (Chayote v1)
DescriptionCold-regulated 413 inner membrane protein 2
Genome locationLG08:38962755..38964749
RNA-Seq ExpressionSed0013902
SyntenySed0013902
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443932.1 PREDICTED: cold-regulated 413 inner membrane protein 2, chloroplastic-like [Cucumis melo]3.5e-9182.1Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S +SL P S YKS L+VPLSLRSSPPNAKLS+N AA  SSI YNPLRFA+GSE I+TA I+KK++RGL A CYAMP+  R LQW+STISSVVL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG IISL+IAAYLAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S +RAFDQNSI ATVAVIC+TAVS L VI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

XP_022140053.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Momordica charantia]2.5e-8980.79Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S  SL+  SLYK+ L+ PLSLRS P +AKLS+NPA   SSI YNPLRFA+G+E I+TAAI+K+RSRGL  VCYAMPL AR++QWISTIS VVL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EGSIISL+IAA+LAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S RRAFDQNSI AT AV+CVTA S LLVI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

XP_022955155.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata]4.3e-8983.48Show/hide
Query:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG
        L S ISL+   LYKS L+ PLSLRSS PNAKL+ NPAA  S I  NP+RF  GS+V ST AI+KKR RGL AVCYAMPL+AR+LQWISTISSV+LMLARG
Subjt:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG+IISL+IAAYLAF+HFSRAGS RRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA

Query:  FDQNSIFATVAVICVTAVSILLVI
        FDQNSI ATVA+ICVTAVSILLVI
Subjt:  FDQNSIFATVAVICVTAVSILLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]9.5e-8983.04Show/hide
Query:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG
        L S ISL+   L+KS L+ PLSLRSS PNAKL+ NPAA  SSI  NP+RF  GS+V ST AI+KKR RGL AVCYAMPL+AR+LQWISTISSV+LMLARG
Subjt:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG+IISL+IAAYLAF+HFSRAGS RRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA

Query:  FDQNSIFATVAVICVTAVSILLVI
        FDQNSI ATVA+ICVTAVS LLVI
Subjt:  FDQNSIFATVAVICVTAVSILLVI

XP_038896035.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like [Benincasa hispida]3.5e-9182.97Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S +SL   SLY+S L+VPLSLRSSPPNAKLS +PAA  SSI YNPLRFA+GSE I+TAAI+KKRSRGL A+CYAMP+ AR LQWISTISS VL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLA+GTGIQKSFIVPLFAL APASV+SWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQ+LRG+ EG+IISL+IAAYLAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S RRAFDQNSI ATVAVIC TAVS LLVI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

TrEMBL top hitse value%identityAlignment
A0A1S3B961 cold-regulated 413 inner membrane protein 2, chloroplastic-like1.7e-9182.1Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S +SL P S YKS L+VPLSLRSSPPNAKLS+N AA  SSI YNPLRFA+GSE I+TA I+KK++RGL A CYAMP+  R LQW+STISSVVL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG IISL+IAAYLAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S +RAFDQNSI ATVAVIC+TAVS L VI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

A0A5D3DB21 Cold-regulated 413 inner membrane protein 21.7e-9182.1Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S +SL P S YKS L+VPLSLRSSPPNAKLS+N AA  SSI YNPLRFA+GSE I+TA I+KK++RGL A CYAMP+  R LQW+STISSVVL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLA+GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG IISL+IAAYLAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S +RAFDQNSI ATVAVIC+TAVS L VI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

A0A6J1CH44 cold-regulated 413 inner membrane protein 1, chloroplastic-like1.2e-8980.79Show/hide
Query:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL
        MV  SL S  SL+  SLYK+ L+ PLSLRS P +AKLS+NPA   SSI YNPLRFA+G+E I+TAAI+K+RSRGL  VCYAMPL AR++QWISTIS VVL
Subjt:  MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVL

Query:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG
        MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIW+AFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EGSIISL+IAA+LAF+HFSRAG
Subjt:  MLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAG

Query:  SLRRAFDQNSIFATVAVICVTAVSILLVI
        S RRAFDQNSI AT AV+CVTA S LLVI
Subjt:  SLRRAFDQNSIFATVAVICVTAVSILLVI

A0A6J1GUE0 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X22.1e-8983.48Show/hide
Query:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG
        L S ISL+   LYKS L+ PLSLRSS PNAKL+ NPAA  S I  NP+RF  GS+V ST AI+KKR RGL AVCYAMPL+AR+LQWISTISSV+LMLARG
Subjt:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG+IISL+IAAYLAF+HFSRAGS RRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA

Query:  FDQNSIFATVAVICVTAVSILLVI
        FDQNSI ATVA+ICVTAVSILLVI
Subjt:  FDQNSIFATVAVICVTAVSILLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X24.6e-8983.04Show/hide
Query:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG
        L S ISL+   L+KS L+ PLSLRSS PNAKL+ NPAA  SSI  NP+RF  GS+V ST AI+KKR RGL AVCYAMPL+AR+LQWISTISSV+LMLARG
Subjt:  LYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARG

Query:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA
        TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRG+ EG+IISL+IAAYLAF+HFSRAGS RRA
Subjt:  TGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRA

Query:  FDQNSIFATVAVICVTAVSILLVI
        FDQNSI ATVA+ICVTAVS LLVI
Subjt:  FDQNSIFATVAVICVTAVSILLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic3.4e-5758.26Show/hide
Query:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSS-ISYNPLRFAIGSEVIST--AAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKS
        SL+     + L LR  P N    I+   H +S + +NPLR +   +  +T  A   K+R RG   VCYA P L+  +LQWISTIS V LM ARGTGI KS
Subjt:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSS-ISYNPLRFAIGSEVIST--AAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKS

Query:  FIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSI
        F+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG  EG+I+SL I+ +LAF+HFSRAG+L++AFDQNS+
Subjt:  FIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSI

Query:  FATVAVICVTAVSILLVI
         ATVA+I VT VS L +I
Subjt:  FATVAVICVTAVSILLVI

O23164 Cold-regulated 413 plasma membrane protein 42.6e-1233.57Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR S  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS

Query:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICV
        +I LVIA YL  EH   +G  + +F Q N I  T+ ++ +
Subjt:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic3.1e-5855.56Show/hide
Query:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAA--ISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARGTGIQKSFI
        SL+     + L LRS P +         H S + +NPLR +   +  +T +  + K+R RG   VCYA P++A  LQWISTIS + LMLARGTGI KS +
Subjt:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAA--ISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARGTGIQKSFI

Query:  VPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFA
        VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG  EG+II++ I+ +LAF+HFSRAGSL +A+++ S+ A
Subjt:  VPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFA

Query:  TVAVICVTAVSILLVI
        TVA+I VT VS+LL++
Subjt:  TVAVICVTAVSILLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 29.1e-1028.86Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGSLEGS
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RG+  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGSLEGS

Query:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI
        +ISL I  YL  EH   +G  R +F Q   +  T+ +I +    +  +I
Subjt:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI

Q9XIM7 Cold-regulated 413 plasma membrane protein 11.2e-0932.21Show/hide
Query:  LQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS
        L+W+++I+++ L++       T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R S  G 
Subjt:  LQWISTISSVVLMLAR----GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS

Query:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI
         I L I  YL  EH   +G  R AF + N I  TV +IC+    +  +I
Subjt:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 22.4e-5858.26Show/hide
Query:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSS-ISYNPLRFAIGSEVIST--AAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKS
        SL+     + L LR  P N    I+   H +S + +NPLR +   +  +T  A   K+R RG   VCYA P L+  +LQWISTIS V LM ARGTGI KS
Subjt:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSS-ISYNPLRFAIGSEVIST--AAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKS

Query:  FIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSI
        F+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVAPYQV ++RG  EG+I+SL I+ +LAF+HFSRAG+L++AFDQNS+
Subjt:  FIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSI

Query:  FATVAVICVTAVSILLVI
         ATVA+I VT VS L +I
Subjt:  FATVAVICVTAVSILLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 23.9e-5667.07Show/hide
Query:  TAAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL
        +A   K+R RG   VCYA P L+  +LQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LL
Subjt:  TAAISKKRSRGLRAVCYAMP-LAARDLQWISTISSVVLMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLL

Query:  LVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFATVAVICVTAVSILLVI
        LVIVAPYQV ++RG  EG+I+SL I+ +LAF+HFSRAG+L++AFDQNS+ ATVA+I VT VS L +I
Subjt:  LVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFATVAVICVTAVSILLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 12.2e-5955.56Show/hide
Query:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAA--ISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARGTGIQKSFI
        SL+     + L LRS P +         H S + +NPLR +   +  +T +  + K+R RG   VCYA P++A  LQWISTIS + LMLARGTGI KS +
Subjt:  SLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAA--ISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARGTGIQKSFI

Query:  VPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFA
        VPLFAL AP+S+++WIKGEYG+W+AFLAL+ RLFF  PGELE+PFI+LLLVIVAPYQV N+RG  EG+II++ I+ +LAF+HFSRAGSL +A+++ S+ A
Subjt:  VPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFA

Query:  TVAVICVTAVSILLVI
        TVA+I VT VS+LL++
Subjt:  TVAVICVTAVSILLVI

AT3G50830.1 cold-regulated 413-plasma membrane 26.5e-1128.86Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGSLEGS
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RG+  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGSLEGS

Query:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI
        +ISL I  YL  EH   +G  R +F Q   +  T+ +I +    +  +I
Subjt:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICVTAVSILLVI

AT4G37220.1 Cold acclimation protein WCOR413 family1.8e-1333.57Show/hide
Query:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR S  G+
Subjt:  LQWISTISSVVLMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGSLEGS

Query:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICV
        +I LVIA YL  EH   +G  + +F Q N I  T+ ++ +
Subjt:  IISLVIAAYLAFEHFSRAGSLRRAFDQ-NSIFATVAVICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCCGCATCTCTGTATTCTCCCATTTCTCTCAACCCTTTCTCTCTCTACAAATCCAACCTCGCCGTCCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCT
CTCGATCAATCCCGCCGCTCATCTGAGTTCCATTTCTTACAATCCGCTCAGGTTTGCTATCGGTAGCGAGGTGATCTCTACGGCGGCGATTAGCAAGAAGAGGAGCCGTG
GTTTACGTGCTGTTTGTTACGCTATGCCTCTTGCTGCTCGCGATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTAGCAAGGGGGACTGGGATTCAGAAG
TCGTTTATTGTTCCACTATTTGCTCTCCAAGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGTGCATTTTTGGCACTTCTCGTTCGACTGTT
CTTCTTCATCCCTGGTGAACTGGAGATACCTTTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAAGTCTAGAAGGGAGCATTATCT
CACTAGTGATTGCAGCATATTTAGCTTTCGAGCATTTTTCTCGAGCTGGCAGCCTTCGGAGGGCATTTGATCAGAATTCGATTTTTGCGACAGTAGCAGTCATTTGTGTT
ACTGCTGTCTCAATCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCCGCATCTCTGTATTCTCCCATTTCTCTCAACCCTTTCTCTCTCTACAAATCCAACCTCGCCGTCCCTCTCTCTCTAAGATCTTCACCGCCGAATGCAAAGCT
CTCGATCAATCCCGCCGCTCATCTGAGTTCCATTTCTTACAATCCGCTCAGGTTTGCTATCGGTAGCGAGGTGATCTCTACGGCGGCGATTAGCAAGAAGAGGAGCCGTG
GTTTACGTGCTGTTTGTTACGCTATGCCTCTTGCTGCTCGCGATCTTCAGTGGATCTCCACTATTTCTTCTGTGGTTTTAATGCTAGCAAGGGGGACTGGGATTCAGAAG
TCGTTTATTGTTCCACTATTTGCTCTCCAAGCACCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATTTGGAGTGCATTTTTGGCACTTCTCGTTCGACTGTT
CTTCTTCATCCCTGGTGAACTGGAGATACCTTTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAAGTCTAGAAGGGAGCATTATCT
CACTAGTGATTGCAGCATATTTAGCTTTCGAGCATTTTTCTCGAGCTGGCAGCCTTCGGAGGGCATTTGATCAGAATTCGATTTTTGCGACAGTAGCAGTCATTTGTGTT
ACTGCTGTCTCAATCCTGCTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MVSASLYSPISLNPFSLYKSNLAVPLSLRSSPPNAKLSINPAAHLSSISYNPLRFAIGSEVISTAAISKKRSRGLRAVCYAMPLAARDLQWISTISSVVLMLARGTGIQK
SFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGSLEGSIISLVIAAYLAFEHFSRAGSLRRAFDQNSIFATVAVICV
TAVSILLVI