; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0013956 (gene) of Chayote v1 genome

Gene IDSed0013956
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L34
Genome locationLG03:1282794..1284582
RNA-Seq ExpressionSed0013956
SyntenySed0013956
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138165.3 60S ribosomal protein L34 [Cucumis sativus]3.0e-5496.67Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL +KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

XP_010066914.2 60S ribosomal protein L34 [Eucalyptus grandis]6.8e-5495.83Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAKDKL +KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

XP_027095336.1 60S ribosomal protein L34-like [Coffea arabica]1.4e-5497.5Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

XP_027098139.1 60S ribosomal protein L34 [Coffea arabica]4.0e-5496.67Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

XP_038889603.1 60S ribosomal protein L34 [Benincasa hispida]5.2e-5495.83Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

TrEMBL top hitse value%identityAlignment
A0A068TVQ9 Uncharacterized protein6.6e-5597.5Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

A0A0A0LK03 Uncharacterized protein1.5e-5496.67Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL +KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

A0A1S3BV34 60S ribosomal protein L341.5e-5496.67Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL +KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

A0A5A7UWQ0 60S ribosomal protein L341.5e-5496.67Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL +KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

A0A6P6UY28 60S ribosomal protein L34-like6.6e-5597.5Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L347.1e-5490.83Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQK K+K   K+
Subjt:  KIVKKVLKIQKAKDKLTTKS

P41098 60S ribosomal protein L341.3e-5593.33Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLKIQKAK+KL  KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

Q42351 60S ribosomal protein L34-15.4e-5490Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLK+QKAK+K+  K+
Subjt:  KIVKKVLKIQKAKDKLTTKS

Q9FE65 60S ribosomal protein L34-22.7e-5389.92Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTK
        KIVKKVLK+QKAK+K+  K
Subjt:  KIVKKVLKIQKAKDKLTTK

Q9LJW6 60S ribosomal protein L34-32.3e-5288.33Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLK+QKAK+K   KS
Subjt:  KIVKKVLKIQKAKDKLTTKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein3.8e-5590Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLK+QKAK+K+  K+
Subjt:  KIVKKVLKIQKAKDKLTTKS

AT1G26880.2 Ribosomal protein L34e superfamily protein2.6e-4391.3Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII
        M QRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSGSAVRER +
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERII

AT1G69620.1 ribosomal protein L341.9e-5489.92Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTK
        KIVKKVLK+QKAK+K+  K
Subjt:  KIVKKVLKIQKAKDKLTTK

AT3G28900.1 Ribosomal protein L34e superfamily protein1.6e-5388.33Show/hide
Query:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ
        M QRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKLTTKS
        KIVKKVLK+QKAK+K   KS
Subjt:  KIVKKVLKIQKAKDKLTTKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGCGTCTTACTTACCGTAAGCGGCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTGAAGACTCCTGGTGGAAAGTTGGTCTACCAAACCACCAAGAA
GAGGGCCAGCGGTCCCAAATGTCCTGTTACTGGGAAGAGAATCCAAGGGATTCCACATTTGAGGCCTGCCGAATACAAGAGATCTCGACTGGCTAGGAATCGTAGAACTG
TGAATCGGGCTTATGGTGGTGTTTTGTCAGGCAGTGCCGTTAGGGAGAGGATTATTCGAGCTTTTCTAGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAG
AAGGCAAAGGATAAGTTAACCACCAAGAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAGCGTCTTACTTACCGTAAGCGGCACAGCTACGCCACCAAATCCAATCAGCACCGCGTTGTGAAGACTCCTGGTGGAAAGTTGGTCTACCAAACCACCAAGAA
GAGGGCCAGCGGTCCCAAATGTCCTGTTACTGGGAAGAGAATCCAAGGGATTCCACATTTGAGGCCTGCCGAATACAAGAGATCTCGACTGGCTAGGAATCGTAGAACTG
TGAATCGGGCTTATGGTGGTGTTTTGTCAGGCAGTGCCGTTAGGGAGAGGATTATTCGAGCTTTTCTAGTAGAAGAGCAGAAGATTGTGAAAAAGGTATTGAAAATCCAG
AAGGCAAAGGATAAGTTAACCACCAAGAGTTAGTTGAGTAGGTGGAGTCTTTGAGTATTTTGCAAAATTTTAGTGTTGATAGAGATTATTAGGTGTTTCTGCTTTCTCTT
ATAAAAAAGTCTCTAATTAAATCAACCCATTTTCATTCCTCACCTTGTTGACAAATCAATTTCTCATGCCTTGTTTGGTTATATTATGTATTGGGGTGTTACTTTAATTC
CCTTTAGAGATTTTTGTACTATGTTTTGCTGAGTTTTAGCTTGCTTATGTGGCATCATTTTGGATTTTTTCTGATTAGATGAAGTTGAATTTTATTGTTTTCTTTTATGA
GGATCCTTTGGATTGTTGTTGACTGTCACGATTATGATTGATTTTTAGGTAAGGTTTTGAAGCTAACTTGATAATTAGAAGAAAATTATACTT
Protein sequenceShow/hide protein sequence
MAQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQ
KAKDKLTTKS