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Sed0013997 (gene) of Chayote v1 genome

Gene IDSed0013997
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant, putative
Genome locationLG08:36207499..36208381
RNA-Seq ExpressionSed0013997
SyntenySed0013997
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573277.1 hypothetical protein SDJN03_27164, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2572.92Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD
        EDA ERAKE A+GMKEKTE+MAKEGTKK  ETVQNIGEK K TV+GAWE AKDTTQKIKE V+GS  DE DE+      DEDV+DVRRK+G K DD
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD

KAG7012442.1 hypothetical protein SDJN02_25194, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-2572.92Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD
        EDA ERAKE A+GMKEKTE+MAKEGTKK  ETVQNIGEK K TV+GAWE AKDTTQKIKE V+GS  DE DE+      DEDV+DVRRK+G K DD
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD

XP_004146655.2 late embryogenesis abundant protein, group 3 [Cucumis sativus]3.6e-2771.13Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD
        E+A ERAKEGA+GMK+KT++MAKEGT K  ET+QNIGEK K+TVQGAWE AKDTT K+KE V+G++++EEDEE R G+VMDEDV+DVRRKAG+K+D+
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD

XP_008442715.1 PREDICTED: ABA-inducible protein PHV A1-like [Cucumis melo]3.1e-2671.13Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD
        E+A ERAKEGA+GMKEKTE+MAKEGT K  ETVQNIGEK K+TVQGAWE AKDTT K+KE V+G++++EE EE R G+VMDEDV+++RRKAG+K+D+
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD

XP_023542553.1 late embryogenesis abundant protein, group 3 [Cucurbita pepo subsp. pepo]1.6e-3078.12Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD
        EDA ERAKE A+GMKEKTEDMAKEGTKK  ETVQNIGE+ K+TV+GAWE AKDTTQKIKE V+GS  DE +EERGG+VMDEDV+DVRRK+G K DD
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD

TrEMBL top hitse value%identityAlignment
A0A0A0LRY0 Uncharacterized protein1.8e-2771.13Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD
        E+A ERAKEGA+GMK+KT++MAKEGT K  ET+QNIGEK K+TVQGAWE AKDTT K+KE V+G++++EEDEE R G+VMDEDV+DVRRKAG+K+D+
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD

A0A1S3B5V3 ABA-inducible protein PHV A1-like1.5e-2671.13Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD
        E+A ERAKEGA+GMKEKTE+MAKEGT K  ETVQNIGEK K+TVQGAWE AKDTT K+KE V+G++++EE EE R G+VMDEDV+++RRKAG+K+D+
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD

A0A5D3DRU4 ABA-inducible protein PHV A1-like1.5e-2671.13Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD
        E+A ERAKEGA+GMKEKTE+MAKEGT K  ETVQNIGEK K+TVQGAWE AKDTT K+KE V+G++++EE EE R G+VMDEDV+++RRKAG+K+D+
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEE-RGGQVMDEDVIDVRRKAGSKFDD

A0A6J1GR50 late embryogenesis abundant protein, group 3 isoform X12.4e-2470.83Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD
        EDA ERAKE A+GMKEKTE+MAKEGTKK  ETVQNIGEK K TV+GAWE AKDTTQKIKE V+GS  DE          DEDV+DVRRK+G K DD
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD

A0A6J1K2X8 late embryogenesis abundant protein, group 3-like3.8e-2268.75Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD
        EDA ERAKE A+GMKEKTE+MAKEGTKK  ETVQNIGEK K+TV+GAWE AKDTTQKIKE V+GS  DE          DEDV+D+RR +G K DD
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21020.1 Late embryogenesis abundant protein (LEA) family protein2.4e-0842.27Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETV----QNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSK
        ++AKE+A+   E +KE  ED  KE  +  +ETV    + +GEKTKETV+GAWE  K+  Q + E V+G    EED E+    M++ V D R+K   K
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETV----QNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSK

AT5G44310.1 Late embryogenesis abundant protein (LEA) family protein2.8e-0942.22Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKA
        E+ K++AK+ AE  KEK EDMA       +E  Q+IGEKT +TV+  WE AK T QK+ E V+GS    E+ ++    +D+ + D+ +KA
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKA

AT5G44310.2 Late embryogenesis abundant protein (LEA) family protein2.8e-0942.22Show/hide
Query:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKA
        E+ K++AK+ AE  KEK EDMA       +E  Q+IGEKT +TV+  WE AK T QK+ E V+GS    E+ ++    +D+ + D+ +KA
Subjt:  EDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGACATGGCGTGGAGGGAATGAAGATGCCAAGGAAAGAGCGAAGGAAGGCGCGGAGGGAATGAAAGAGAAGACGGAAGACATGGCGAAGGAGGGGACGAAGAA
GGTGAGGGAGACGGTGCAGAACATTGGGGAGAAGACGAAGGAAACGGTGCAGGGGGCATGGGAGATGGCTAAGGATACGACGCAGAAGATAAAGGAGACGGTAATCGGGT
CGTCGAGTGACGAAGAAGATGAAGAAAGGGGAGGGCAAGTGATGGATGAGGATGTTATAGATGTTAGGAGAAAAGCTGGGAGCAAGTTTGATGATTGA
mRNA sequenceShow/hide mRNA sequence
AAGCAAACCAAATTGACAGTAAGCAAAAAGGTTAAAGAACATGGCATTGAATGTAAGGATGTGGATGTTTGGCAAAAATGTGATGTTCAATCTGTGTAAGGCCTTTCCCT
ATGCTTCTCCTTCTTCCTCTCTCAGATATTCCACCAAGTTTTCAAGGCTCTCTTTATCTACTTCTGCCACTAAACAGTCATGGGATGGACATGGCGTGGAGGGAATGAAG
ATGCCAAGGAAAGAGCGAAGGAAGGCGCGGAGGGAATGAAAGAGAAGACGGAAGACATGGCGAAGGAGGGGACGAAGAAGGTGAGGGAGACGGTGCAGAACATTGGGGAG
AAGACGAAGGAAACGGTGCAGGGGGCATGGGAGATGGCTAAGGATACGACGCAGAAGATAAAGGAGACGGTAATCGGGTCGTCGAGTGACGAAGAAGATGAAGAAAGGGG
AGGGCAAGTGATGGATGAGGATGTTATAGATGTTAGGAGAAAAGCTGGGAGCAAGTTTGATGATTGAAATAAGTTTGGGTTTGTTTGTGCTTTTACATGAATGGAAATGA
ATGTTGGTTTTTGTTTTTTATGCTTTTGATATGGATTTTATGTGTTGC
Protein sequenceShow/hide protein sequence
MGWTWRGGNEDAKERAKEGAEGMKEKTEDMAKEGTKKVRETVQNIGEKTKETVQGAWEMAKDTTQKIKETVIGSSSDEEDEERGGQVMDEDVIDVRRKAGSKFDD