; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014008 (gene) of Chayote v1 genome

Gene IDSed0014008
OrganismSechium edule (Chayote v1)
Descriptionselenoprotein F-like
Genome locationLG07:830772..836753
RNA-Seq ExpressionSed0014008
SyntenySed0014008
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592972.1 Selenoprotein F, partial [Cucurbita argyrosperma subsp. sororia]1.9e-7886.55Show/hide
Query:  MQLLTGAKKPATAA--MATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL T  K+PAT     A AAAIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPATAA--MATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

KAG7025384.1 Selenoprotein F [Cucurbita argyrosperma subsp. argyrosperma]1.9e-7886.55Show/hide
Query:  MQLLTGAKKPATAA--MATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL T  K+PAT     A AAAIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPATAA--MATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

XP_022960129.1 selenoprotein F-like [Cucurbita moschata]5.0e-7987.72Show/hide
Query:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL    KKPAT  A  A AAAIIFMASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

XP_023004122.1 selenoprotein F-like [Cucurbita maxima]3.3e-7887.13Show/hide
Query:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL    KKPAT  A  A  AAIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

XP_038875398.1 selenoprotein F [Benincasa hispida]2.3e-7988.3Show/hide
Query:  MQLLTGAKKPATA-AMATAA-AIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQLL G + PATA  MA AA  +IF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPATA-AMATAA-AIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKD+FPSVKVQYIFNSPPKLILLDDEGQHKES+RIDNWKREHILQFLQEKVKRS+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

TrEMBL top hitse value%identityAlignment
A0A1S3CC00 15 kDa selenoprotein4.6e-7885.96Show/hide
Query:  MQLLTGAKKPATAAMAT--AAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQLL G   PATA   T  AAAIIF++SMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCC EDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPATAAMAT--AAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEE+KD+FPSVKVQY FNSPPKLILLDDEGQHKES+RIDNWKREH LQFLQEKVKRS+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

A0A6J1GQK6 selenoprotein F-like1.7e-7787.06Show/hide
Query:  MQLLTGAKKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKL
        MQLLTG K PAT  +  A AIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMRKL
Subjt:  MQLLTGAKKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKL

Query:  GFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVK-RSAAI
         FYPEIVGFIEEEKD+FPSV VQY FNSPPKLILLDDEGQHKES+RIDNWKREHILQFL+EKVK RS+AI
Subjt:  GFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVK-RSAAI

A0A6J1HA08 selenoprotein F-like2.4e-7987.72Show/hide
Query:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL    KKPAT  A  A AAAIIFMASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVK+QYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

A0A6J1JXH9 selenoprotein F-like1.9e-7686.47Show/hide
Query:  MQLLTGAKKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKL
        MQLLTG K PAT  +  A AIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMRKL
Subjt:  MQLLTGAKKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKL

Query:  GFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVK-RSAAI
         FYPEIVGFIEEEK +FPSV VQY FNSPPKLILLDDEGQHKES+RIDNWKREHILQFL+EKVK RS+AI
Subjt:  GFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVK-RSAAI

A0A6J1KPJ2 selenoprotein F-like1.6e-7887.13Show/hide
Query:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR
        MQL    KKPAT  A  A  AAIIF+ASMPLAWSKEQLSSR+CEDLGFTGLALCSDCHTLAEY+KDQELV+DCLKCCTEDSDDATSKITYSGA++EVCMR
Subjt:  MQLLTGAKKPAT--AAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMR

Query:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI
        KL FYPEIVGFIEEEKDKFPSVKVQYIFNSPPKL LLDDEGQHKES+RIDNWKREHILQFLQ+KVK S+AI
Subjt:  KLGFYPEIVGFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F7.2e-2038.64Show/hide
Query:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GAI+EVC  KLG +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR

A8YXY3 Selenoprotein F1.9e-2038.64Show/hide
Query:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GAI+EVC  KLG +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR

O60613 Selenoprotein F3.2e-2038.64Show/hide
Query:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GAI+EVC  KLG +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR

Q802F3 Selenoprotein F7.2e-2038.64Show/hide
Query:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GAI+EVC  KLG +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR

Q923V8 Selenoprotein F7.9e-1937.88Show/hide
Query:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI
        + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GAI+EVC  KLG +P++  F+  +K K F  ++++Y+  S P L 
Subjt:  QLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFIEEEKDK-FPSVKVQYIFNSPPKLI

Query:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR
        LLDD G   E + I  W  + + +FL EK++R
Subjt:  LLDDEGQHKESVRIDNWKREHILQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein8.9e-6670.81Show/hide
Query:  KKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIV
        K+   A M   +A++ +       +KEQLS+++CEDLGF+GLALCSDCH+L+EYVKDQELVSDCLKCC +DS+D+ SK+TYSGAI+EVCMRKL FYPEIV
Subjt:  KKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIV

Query:  GFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAA
        GFIEEEK+KFPSVKVQYIFNSPPKLI+LD++G+HKES+RIDNWKREH+LQ+++EKVK +AA
Subjt:  GFIEEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCACCGGTGCGAAGAAGCCGGCTACGGCGGCGATGGCGACAGCGGCGGCGATCATTTTCATGGCGTCAATGCCGTTGGCATGGTCAAAGGAGCAACTCAG
TTCGAGGCAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGCCACACTTTAGCTGAATATGTCAAAGATCAAGAATTAGTGTCAGACTGTTTGAAGT
GTTGCACGGAGGATTCCGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTATAGTGGAGGTCTGCATGAGAAAACTAGGGTTCTATCCAGAAATTGTTGGCTTCATT
GAAGAAGAAAAGGATAAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCGCCGAAGCTGATTTTGCTGGATGATGAGGGCCAACATAAAGAGAGCGTCAGAAT
TGATAATTGGAAACGCGAACATATTTTGCAGTTCCTGCAGGAGAAAGTTAAGCGTTCTGCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
GTCGGAGTAAATTCTTTTTTTAATTATATTTCTCCAAATATGCAGTAAATGTAATTGGTGTTTTCGAGTGAGTTTTCAGATCGTCTCTAGACTTGGATTCTTTACCCACT
CGACGGTGGTCGCAAAGATGCAGCTTCTCACCGGTGCGAAGAAGCCGGCTACGGCGGCGATGGCGACAGCGGCGGCGATCATTTTCATGGCGTCAATGCCGTTGGCATGG
TCAAAGGAGCAACTCAGTTCGAGGCAATGTGAGGATCTAGGTTTCACAGGCCTTGCTCTCTGTTCCGATTGCCACACTTTAGCTGAATATGTCAAAGATCAAGAATTAGT
GTCAGACTGTTTGAAGTGTTGCACGGAGGATTCCGATGATGCCACGAGTAAGATAACTTATTCTGGTGCTATAGTGGAGGTCTGCATGAGAAAACTAGGGTTCTATCCAG
AAATTGTTGGCTTCATTGAAGAAGAAAAGGATAAATTCCCTTCAGTTAAGGTTCAATATATCTTCAACTCTCCGCCGAAGCTGATTTTGCTGGATGATGAGGGCCAACAT
AAAGAGAGCGTCAGAATTGATAATTGGAAACGCGAACATATTTTGCAGTTCCTGCAGGAGAAAGTTAAGCGTTCTGCAGCAATTTAAGGTTCTTTTTTTAATCTCCCAAA
AAAAAAACTTGAAGCAGAAGTTGAATCAAATGTACTAATCCTTTTTTTGTCAATTCCAGAGATAGTTGGAAAGATAACTGATTTATTTGACTTATCCTTTAAAAAAATTT
AAAAAATTAAATAGCGTGCCATTAAAACATTTCTTCCTGTGTGGTTATAAATTCAATCCTCCACCTCTGATATTTGATCTTTTTTTAAAAAAAATATTTTGCGC
Protein sequenceShow/hide protein sequence
MQLLTGAKKPATAAMATAAAIIFMASMPLAWSKEQLSSRQCEDLGFTGLALCSDCHTLAEYVKDQELVSDCLKCCTEDSDDATSKITYSGAIVEVCMRKLGFYPEIVGFI
EEEKDKFPSVKVQYIFNSPPKLILLDDEGQHKESVRIDNWKREHILQFLQEKVKRSAAI