; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014012 (gene) of Chayote v1 genome

Gene IDSed0014012
OrganismSechium edule (Chayote v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationLG06:37823790..37828470
RNA-Seq ExpressionSed0014012
SyntenySed0014012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037445.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.3e-13245.67Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW +    G PG+SF+++LK +A     W      + T  +  +  E+  +D  E    ++ ++ + RL LKA LS +   ES   +QR KK WL E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN++FFH+IC++R++  FI EI D +G    TN+ I+  F+K+F+ +Y+  TK+    I NL WNPI   +   LC PF   E+K  I+SL   K PG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W L+   IM+IF +F+ K VIN+ +N TYI+LIPK    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AFVK RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++L+ NE +DFW+  K  GFI+KLDIEKAFD +NW+FI  +L+ K F + W +WI   IS V YSV+VNGRP+G+I A+RGLRQGDPL PF F I MDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E+   I      ++ +ISH++FADDILLF+  N   L+NL M +  FE ASG++IN+ KS +  +N+  +        WG    S+PL+YLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     KI  KL +W+YA +SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.5e-13244.28Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        +  WW + +  G+ GYSFMR+LK +A   K W       +   ++    EI ++D LE  G  +      R  LKA LS I   E+    Q+CK+ W+HE
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP
        GDEN++FFHKIC AR++   IS+I++  G +C+ +  IAD F+++F  +Y D   +   I+NL W PIS++ + +L +PF+  E+  ++ S   NKAPGP
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP

Query:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD
        DG++++F +K W+ +   I +IF +F    +IN+VVNET I+LI K        ++  ISLTT  YK+I+K LA+RLK  LP TI  SQ AFVKGRQIT+
Subjt:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD

Query:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL
        ++LI NE +DFWR  K+ GF+IKLDIEKAFDK+NW FI  +L  K ++  W + I + IS V YS+++NGRPRG+I  SRG+RQGDPL PF F + MDYL
Subjt:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL

Query:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM
        S L+ +  +K  I    F  +++++H++FADDIL+F+      + NL MI+  FE ASG+ IN+ KSTI  +N+ T         WG     +P +YLGM
Subjt:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM

Query:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        PLG   +  +FWD  + KI  KL++W+Y+ LSKGGR+T+I +
Subjt:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]6.3e-13144.65Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        +  WW + +  GF GYSFMR+LK +A   K W         + ++    EI  +D LE  G  +      RL LKA LS I   E+    Q+CK+ W+HE
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP
        GDEN++FFHKIC AR++   IS++++  G +C+ +  I D F+++F  +Y D   +   I NL W PIS+    +L +PF+  E+  ++ S   NKAPGP
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP

Query:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD
        DGF+++F +K W+ +   I +IF +F     IN+VVNET I+LI K      V+++  ISLTT  YK+I+KVLA+RLK  LP TI   Q AFVKGRQIT+
Subjt:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD

Query:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL
        ++LI NE +DFWR  K+ GF+IKLDIEKAFDK+NW FI  +L  K ++  W   I + IS V YS+++NGRPRG+I  +RG+RQGDPL PF F + MDYL
Subjt:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL

Query:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM
        S L+++   K  I    F  +++++H++FADDIL+F+      + NL MI+  FE ASG+ IN+ KSTI  +N+ T         WG     +P TYLGM
Subjt:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM

Query:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        PLG   +  +FWD  + KI  KL+ W+Y+ LSKGGR+T+I +
Subjt:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

KAA0046762.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.0e-13346.04Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW++    G PGYSF+++LK +A   K W      +    +  +  E+  +D  E    +S ++   RL LKA LS +   ES   +QR KK WL E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN++FFH+IC AR++  FI EI D +G    +ND I+  F+K+F+ +++  TK+    I NL+WNPI   +   LC PF  +E+K  I+SL   K PG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W L+   IM+IF +F+ K VIN+ +N TYI+LIPK    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AFVK RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++L+ NE +DFW+  K  GFI+KLDIEKAFD +NW+FI  +L+ K F   W +WI   IS V YS++VNGRP+G+I A+RGLRQGDPL PF F I MDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E    I    F ++ +ISH++FADDILLF+  N   L NL M +  FE ASG++IN+ KS +  +N+           WG    S+PL+YLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     KI  KL +W+YA +SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

KAA0058104.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.9e-13246.04Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW      G PG+SF+++LK +A   K W    F + T  +  +  E+  +D  E    +S ++ + RL LKA+L+ +   ES   +QR KK W+ E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN AFFH+IC++R++   I EI + +G+   TN+ I+  FV +F+ +Y+  TK     I+NL+WNPI     ++LC PF  EE+K  I S   NKAPG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W+L+   IM+IF +FF K VIN+ +N TYI+LI K    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AF+K RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++LI NE +D+W+  K  GFI+KLDIEKAFD +NW+FI  +L+ K + ++W +WI   IS V YS+ VNG+P+G+I A+RGLRQGDPL PF F IVMDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E+   I      ND +ISH++FADDILLF+  N   L NL M I  FE ASG++IN+ KS +  +N+        T  WG    ++PLTYLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     +I  KL++W+YA++SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein1.2e-13244.28Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        +  WW + +  G+ GYSFMR+LK +A   K W       +   ++    EI ++D LE  G  +      R  LKA LS I   E+    Q+CK+ W+HE
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP
        GDEN++FFHKIC AR++   IS+I++  G +C+ +  IAD F+++F  +Y D   +   I+NL W PIS++ + +L +PF+  E+  ++ S   NKAPGP
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP

Query:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD
        DG++++F +K W+ +   I +IF +F    +IN+VVNET I+LI K        ++  ISLTT  YK+I+K LA+RLK  LP TI  SQ AFVKGRQIT+
Subjt:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD

Query:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL
        ++LI NE +DFWR  K+ GF+IKLDIEKAFDK+NW FI  +L  K ++  W + I + IS V YS+++NGRPRG+I  SRG+RQGDPL PF F + MDYL
Subjt:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL

Query:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM
        S L+ +  +K  I    F  +++++H++FADDIL+F+      + NL MI+  FE ASG+ IN+ KSTI  +N+ T         WG     +P +YLGM
Subjt:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM

Query:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        PLG   +  +FWD  + KI  KL++W+Y+ LSKGGR+T+I +
Subjt:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein3.0e-13144.65Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        +  WW + +  GF GYSFMR+LK +A   K W         + ++    EI  +D LE  G  +      RL LKA LS I   E+    Q+CK+ W+HE
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP
        GDEN++FFHKIC AR++   IS++++  G +C+ +  I D F+++F  +Y D   +   I NL W PIS+    +L +PF+  E+  ++ S   NKAPGP
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGP

Query:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD
        DGF+++F +K W+ +   I +IF +F     IN+VVNET I+LI K      V+++  ISLTT  YK+I+KVLA+RLK  LP TI   Q AFVKGRQIT+
Subjt:  DGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITD

Query:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL
        ++LI NE +DFWR  K+ GF+IKLDIEKAFDK+NW FI  +L  K ++  W   I + IS V YS+++NGRPRG+I  +RG+RQGDPL PF F + MDYL
Subjt:  SVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYL

Query:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM
        S L+++   K  I    F  +++++H++FADDIL+F+      + NL MI+  FE ASG+ IN+ KSTI  +N+ T         WG     +P TYLGM
Subjt:  SSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGM

Query:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        PLG   +  +FWD  + KI  KL+ W+Y+ LSKGGR+T+I +
Subjt:  PLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

A0A5A7TTK1 LINE-1 retrotransposable element ORF2 protein5.0e-13446.04Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW++    G PGYSF+++LK +A   K W      +    +  +  E+  +D  E    +S ++   RL LKA LS +   ES   +QR KK WL E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN++FFH+IC AR++  FI EI D +G    +ND I+  F+K+F+ +++  TK+    I NL+WNPI   +   LC PF  +E+K  I+SL   K PG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W L+   IM+IF +F+ K VIN+ +N TYI+LIPK    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AFVK RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++L+ NE +DFW+  K  GFI+KLDIEKAFD +NW+FI  +L+ K F   W +WI   IS V YS++VNGRP+G+I A+RGLRQGDPL PF F I MDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E    I    F ++ +ISH++FADDILLF+  N   L NL M +  FE ASG++IN+ KS +  +N+           WG    S+PL+YLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     KI  KL +W+YA +SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

A0A5A7USG2 LINE-1 retrotransposable element ORF2 protein9.4e-13346.04Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW      G PG+SF+++LK +A   K W    F + T  +  +  E+  +D  E    +S ++ + RL LKA+L+ +   ES   +QR KK W+ E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN AFFH+IC++R++   I EI + +G+   TN+ I+  FV +F+ +Y+  TK     I+NL+WNPI     ++LC PF  EE+K  I S   NKAPG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W+L+   IM+IF +FF K VIN+ +N TYI+LI K    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AF+K RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++LI NE +D+W+  K  GFI+KLDIEKAFD +NW+FI  +L+ K + ++W +WI   IS V YS+ VNG+P+G+I A+RGLRQGDPL PF F IVMDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E+   I      ND +ISH++FADDILLF+  N   L NL M I  FE ASG++IN+ KS +  +N+        T  WG    ++PLTYLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     +I  KL++W+YA++SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

A0A5D3BUZ3 LINE-1 retrotransposable element ORF2 protein1.6e-13245.67Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE
        M  WW +    G PG+SF+++LK +A     W      + T  +  +  E+  +D  E    ++ ++ + RL LKA LS +   ES   +QR KK WL E
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHE

Query:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG
        GDEN++FFH+IC++R++  FI EI D +G    TN+ I+  F+K+F+ +Y+  TK+    I NL WNPI   +   LC PF   E+K  I+SL   K PG
Subjt:  GDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAG-CIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPG

Query:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT
        PDGF I F+K +W L+   IM+IF +F+ K VIN+ +N TYI+LIPK    +   ++  ISLTT  YKII+K L+ RLK  LP TI  +Q AFVK RQIT
Subjt:  PDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQIT

Query:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY
        D++L+ NE +DFW+  K  GFI+KLDIEKAFD +NW+FI  +L+ K F + W +WI   IS V YSV+VNGRP+G+I A+RGLRQGDPL PF F I MDY
Subjt:  DSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDY

Query:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG
        LS L+   E+   I      ++ +ISH++FADDILLF+  N   L+NL M +  FE ASG++IN+ KS +  +N+  +        WG    S+PL+YLG
Subjt:  LSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLG

Query:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA
        +PLG N     FW     KI  KL +W+YA +SKGGR+T+I++
Subjt:  MPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQA

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein5.1e-3524.95Show/hide
Query:  LTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRC--KKSWLHEG-DENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFV
        LT ++  L+  E+    +    S R  +    + +  IE+ K  Q+    +SW  E  ++      ++   ++    I  I +  G        I     
Subjt:  LTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRC--KKSWLHEG-DENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFV

Query:  KYFTTVY----KDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNET
        +Y+  +Y    ++L +    +       ++  +   L  P +  E+   I+SL   K+PGPDGF+ EFY+++   + P ++++F     + ++     E 
Subjt:  KYFTTVY----KDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNET

Query:  YISLIPKTPK-ATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQ----ITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKIN
         I LIPK  +  TK   +  ISL     KI++K+LA R++  +   IH  Q  F+ G Q    I  S+   N I    R   ++  II +D EKAFDKI 
Subjt:  YISLIPKTPK-ATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQ----ITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKIN

Query:  WNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDIL
          F+L  L   G +  +++ I A       ++++NG+     P   G RQG PL P  F IV++ L+  I   + K++    + + +V +S  +FADD++
Subjt:  WNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDIL

Query:  LFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLS
        ++L    +  +NL  +I +F   SG +IN++KS     N     ++       +   S  + YLG+ L  +    +   + P + +I      W+    S
Subjt:  LFLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLS

Query:  KGGRMTMIQ
          GR+ +++
Subjt:  KGGRMTMIQ

P08548 LINE-1 reverse transcriptase homolog4.3e-3426.25Show/hide
Query:  IESHKLWQRCKKSWLHEGDENTAFFHKI---------CAARKRYKFISEIVDVDGTSCVTNDR------IADVFVKYFTTVYKDLTKAGCIIKNLQWNPI
        IE+ ++ Q+  KS        + FF KI            +KR K +   +  +G   +T D       + + + K ++  Y++L +    ++      +
Subjt:  IESHKLWQRCKKSWLHEGDENTAFFHKI---------CAARKRYKFISEIVDVDGTSCVTNDR------IADVFVKYFTTVYKDLTKAGCIIKNLQWNPI

Query:  SSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPK-ATKVTEYHLISLTTRTYK
        S  +  +L  P S  E+  +I +L   K+PGPDGF+ EFY+ F   + P ++ +F     + ++     E  I+LIPK  K  T+   Y  ISL     K
Subjt:  SSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPK-ATKVTEYHLISLTTRTYK

Query:  IISKVLAERLKHVLPGTIHSSQSAFVKGRQ----ITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVN
        I++K+L  R++  +   IH  Q  F+ G Q    I  S+   N I    +   +   I+ +D EKAFD I   F++  LK  G   T+++ I A  S   
Subjt:  IISKVLAERLKHVLPGTIHSSQSAFVKGRQ----ITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVN

Query:  YSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRIN
         ++++NG      P   G RQG PL P  F IVM+ L+  I   E K +    I   ++ +S  +FADD++++L         L  +IK +   SG +IN
Subjt:  YSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRIN

Query:  IKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQ
          KS           +        +  V   + YLG+ L  +    Y   ++    +I   +  W+    S  GR+ +++
Subjt:  IKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQ

P11369 LINE-1 retrotransposable element ORF2 protein3.3e-3427.94Show/hide
Query:  IADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVN
        I   + + ++T  ++L +    +   Q   ++  Q   L  P S +E++  I+SL   K+PGPDGFS EFY+ F   + P + ++F +   +  +     
Subjt:  IADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVN

Query:  ETYISLIPKTPK-ATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFW-RCSKQSGFIIKLDIEKAFDKINW
        E  I+LIPK  K  TK+  +  ISL     KI++K+LA R++  +   IH  Q  F+ G Q   ++  +  +I +  +   ++  II LD EKAFDKI  
Subjt:  ETYISLIPKTPK-ATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFW-RCSKQSGFIIKLDIEKAFDKINW

Query:  NFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILL
         F++ +L+  G    ++  I A  S    ++ VNG     IP   G RQG PL P+ F IV++ L+  I   + K++    I + +V IS  + ADD+++
Subjt:  NFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILL

Query:  FLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLSK
        ++         L  +I SF    G +IN  KS           +    +   +  V+  + YLG+ L       Y   +     +I   L  W+    S 
Subjt:  FLVFNPIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCN--YVSFWDPTISKIHNKLTHWQYAYLSK

Query:  GGRMTMIQ
         GR+ +++
Subjt:  GGRMTMIQ

P14381 Transposon TX1 uncharacterized 149 kDa protein1.2e-3125.79Show/hide
Query:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAK--LSPILSIESHKLWQRCKKSWL
        +N WW+   V           LKL+   C+E+  S       E   L  E+  LD LE+R   S D      +L+ K  L  +   ++   + R +   L
Subjt:  MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAK--LSPILSIESHKLWQRCKKSWL

Query:  HEGDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWN--PISSVQATVLCE-PFSLEEVKQSIDSLGIN
         + D  + FF+ +   +   K I+ +   DGT     + I D    ++  ++     +    + L W+  P+ S +     E P +L+E+ Q++  +  N
Subjt:  HEGDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWN--PISSVQATVLCE-PFSLEEVKQSIDSLGIN

Query:  KAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKG
        K+PG DG +IEF++ FW+ + P    +  E F K  +        +SL+PK      +  +  +SL +  YKI++K ++ RLK VL   IH  QS  V G
Subjt:  KAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKG

Query:  RQITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFI
        R I D+V +  +++ F R +  S   + LD EKAFD+++  +++  L+   F   ++ ++    +     V +N      +   RG+RQG PL    + +
Subjt:  RQITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFI

Query:  VMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKST
         ++    L+     K L    + + D+ +    +ADD++L +  + + LE      + +  AS  RIN  KS+
Subjt:  VMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFNPIKLENLSMIIKSFELASGMRINIKKST

Q03278 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)1.0e-1127.24Show/hide
Query:  IKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLI
        IKNL W PIS+            +E+K+ +++     A GPDG +       WN +   I  +F    +     R   ++   LIPK P       +  +
Subjt:  IKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLI

Query:  SLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGF---NSTWIRWIH
        S+ +   +   ++LA R+     G + + Q AF+    + ++  + + +I   R   +  +I  LD++KAFD +    IL  L+ K        +I W+ 
Subjt:  SLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAFDKINWNFILAILKLKGF---NSTWIRWIH

Query:  AYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILL
         Y +      VV  + R   PA RG+RQGDPL P  F  VMD +   +   EN   +          I  L+FADD++L
Subjt:  AYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILL

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein7.1e-1625.72Show/hide
Query:  WNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLF-----LKAKLSPILSIESHKLWQRCKKSWLH
        W      G   +S    LK   K CK  N   F N   + +        LD+LE      + + S  LF      + K +   +       Q+ +  WL 
Subjt:  WNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLF-----LKAKLSPILSIESHKLWQRCKKSWLH

Query:  EGDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVY---KDLTKAGCI--IKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGI
        +GD NT FFHK+  A +    I  +   D        ++ ++ V Y+T +     D+     +  IK++     +   A+ L    S +E+  ++ ++  
Subjt:  EGDENTAFFHKICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVY---KDLTKAGCI--IKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGI

Query:  NKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIIS
        NKAPGPD F+ EF+ + W +V  + +    EFF    + +  N T I+LIPK     +++ +  +S  T  YKII+
Subjt:  NKAPGPDGFSIEFYKKFWNLVHPAIMEIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIIS

AT4G20520.1 RNA binding;RNA-directed DNA polymerases2.5e-0832.93Show/hide
Query:  LAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFWRCSK--QSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWI
        + ERLK ++   I  +Q++F+ GR  TD+++   E +   R  K  +   ++KLD+EKA+D+I W+++   L   GF   W+
Subjt:  LAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFWRCSK--QSGFIIKLDIEKAFDKINWNFILAILKLKGFNSTWI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)8.5e-0941.79Show/hide
Query:  VVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITEC-IFQNDVHISHLMFADD
        ++NG P+G +  SRGLRQGDPL P+ F +  + LS L   A+ +  +    +  N   I+HL+FADD
Subjt:  VVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITEC-IFQNDVHISHLMFADD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTGTGGTGGAATTCTTATACAGTGACTGGCTTTCCTGGATATTCTTTTATGCGTAAGCTTAAGCTCATTGCCAAGAATTGTAAAGAGTGGAATATCTCTTTTTT
TAAGAATTCGACTATGGAGCAAAGAATGTTGACTGATGAAATTGCTAGACTGGATGCTCTTGAAGAGAGGGGAGATATTTCCATTGATGATGTTTCTGCTCGATTGTTCC
TTAAGGCAAAGCTAAGCCCTATTTTATCTATAGAGTCTCATAAATTATGGCAAAGATGTAAGAAAAGCTGGTTACATGAGGGTGATGAGAATACAGCTTTTTTCCATAAA
ATTTGTGCTGCTCGCAAAAGATATAAATTCATCTCCGAAATTGTTGATGTCGATGGAACAAGCTGTGTGACTAATGATAGGATTGCCGATGTTTTTGTGAAATACTTCAC
TACTGTTTACAAAGATTTGACCAAAGCTGGGTGTATTATTAAAAATTTGCAATGGAACCCCATTTCTAGTGTTCAAGCTACTGTTTTGTGTGAACCTTTTTCTTTGGAGG
AAGTTAAGCAGAGCATTGACTCCCTTGGAATCAACAAAGCCCCTGGTCCTGATGGGTTCTCGATTGAATTTTATAAGAAATTTTGGAACCTGGTTCATCCTGCTATCATG
GAGATTTTTGTGGAGTTCTTTCACAAGAGTGTTATTAATCGGGTTGTTAATGAAACCTACATTTCCCTCATTCCAAAAACTCCAAAGGCGACTAAGGTGACTGAATACCA
TCTTATCAGCTTAACGACGCGTACTTACAAAATAATTTCAAAAGTGCTGGCTGAGAGACTTAAACATGTTCTTCCTGGTACAATCCATTCTAGTCAAAGCGCTTTTGTCA
AAGGAAGGCAAATAACAGATTCAGTTCTTATTACTAATGAAATTATTGATTTCTGGCGGTGCTCTAAACAAAGTGGTTTTATCATTAAACTTGATATTGAGAAGGCTTTT
GACAAGATCAACTGGAACTTTATCTTAGCTATTCTTAAGCTAAAAGGTTTCAACTCAACTTGGATAAGATGGATTCATGCTTATATTTCATATGTTAATTATTCTGTAGT
TGTGAATGGGAGGCCAAGGGGAAAAATTCCAGCTTCTAGAGGCCTTAGGCAGGGTGATCCTCTTAAACCCTTCCCTTTTTTTATTGTTATGGACTATCTTTCGAGCCTTA
TTTTGGATGCGGAAAATAAGGATCTCATAACAGAATGCATTTTTCAGAATGATGTTCATATCTCCCACTTAATGTTCGCTGATGATATACTCTTATTCTTAGTTTTTAAT
CCCATCAAACTTGAAAACCTCAGTATGATTATTAAATCTTTTGAACTTGCATCTGGTATGAGAATCAATATTAAAAAATCCACTATTTCAGGTCTAAACTTGAGAACTCA
TATGCAAGCTCTTACTACGAAGATTTGGGGATATAAGTATGTTTCTATGCCTCTCACTTATCTTGGGATGCCTTTGGGTGACAACTGCAATTATGTTTCTTTCTGGGATC
CAACCATTTCGAAGATTCACAACAAACTTACTCACTGGCAATATGCTTATCTTTCTAAAGGGGGTCGTATGACAATGATACAAGCTGTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
CGATTTCTTGCGATGCTTCATCAATCCCCTCCACATCATCTAAGAAAATTGAAAATACCCCTGTGGCTGCTGCCCAGAATTTTCTCAGGGATGAAGGCTCTAGATCAATC
TCCAGCGGATGTATCAATTTTTTCCCCTCTCTCTTCCGAAAATGCAAAAACTCTCATCTGATAAAGAATTGGTTGTTGATTTGACAAATTTCTCCCTTCTCCAATGGATT
GAACATGTTGTTTCGAGCCCGAAAATATCGCCTACATGTTCTAAACAATCTGACGGATAAGATGGAGTTGAAGAAATCACAGGAGATGCTGGAAAAGAAAAAGAATCCTT
TAAAAATAATGTTAAAAAGTGGCTTAAAGATAACAACTATAGCATAACCTCAACGGATAATGAGAACTTGCAAAATTCAGAGAACGGGGACCCTCTCCTACATTGCCCTT
ATTCTTCAAGCTCACAGGGGGCGCAAATGTCCTTATGAAGGTGCTAGCATGGAATGTTCGAGGAATTTATGGCCCGACTAAACGAAGTTGTAGACGTTTTTTTTCTGGAA
TGAGCTTTATTATCTTAATGGATTATGCTCTCAATATTGGCTCTTAGGAGGGGATTTCAATGTTTTTCATTGGCCTCATGAATCTTCTTCTCAGAATCCTCCAAGGAAGA
GTATGAAAGATTTAATAGATTGATCCAGAGCTGCAACCTCTTCGAATCTCAATGTATCTCTAATCTGTATACTTGGTCTAATCTGCGTATCTCCCCCACTTTATCACGTT
TGGACATATTTTTTGTATCAAAGAATTGGATTGATAAATTTCACACCCATCATTCTCGCAGACTTGCTAGAAACACCTCAGACCATTTTCCAATTTTGCTTGAATCTAAG
GATCTGATATGGGGACCATGCCCTTTTAAATTCGAAAACATTTGGATTGGTTCTAAAGATTTTGCTGCTCATATGAATTTGTGGTGGAATTCTTATACAGTGACTGGCTT
TCCTGGATATTCTTTTATGCGTAAGCTTAAGCTCATTGCCAAGAATTGTAAAGAGTGGAATATCTCTTTTTTTAAGAATTCGACTATGGAGCAAAGAATGTTGACTGATG
AAATTGCTAGACTGGATGCTCTTGAAGAGAGGGGAGATATTTCCATTGATGATGTTTCTGCTCGATTGTTCCTTAAGGCAAAGCTAAGCCCTATTTTATCTATAGAGTCT
CATAAATTATGGCAAAGATGTAAGAAAAGCTGGTTACATGAGGGTGATGAGAATACAGCTTTTTTCCATAAAATTTGTGCTGCTCGCAAAAGATATAAATTCATCTCCGA
AATTGTTGATGTCGATGGAACAAGCTGTGTGACTAATGATAGGATTGCCGATGTTTTTGTGAAATACTTCACTACTGTTTACAAAGATTTGACCAAAGCTGGGTGTATTA
TTAAAAATTTGCAATGGAACCCCATTTCTAGTGTTCAAGCTACTGTTTTGTGTGAACCTTTTTCTTTGGAGGAAGTTAAGCAGAGCATTGACTCCCTTGGAATCAACAAA
GCCCCTGGTCCTGATGGGTTCTCGATTGAATTTTATAAGAAATTTTGGAACCTGGTTCATCCTGCTATCATGGAGATTTTTGTGGAGTTCTTTCACAAGAGTGTTATTAA
TCGGGTTGTTAATGAAACCTACATTTCCCTCATTCCAAAAACTCCAAAGGCGACTAAGGTGACTGAATACCATCTTATCAGCTTAACGACGCGTACTTACAAAATAATTT
CAAAAGTGCTGGCTGAGAGACTTAAACATGTTCTTCCTGGTACAATCCATTCTAGTCAAAGCGCTTTTGTCAAAGGAAGGCAAATAACAGATTCAGTTCTTATTACTAAT
GAAATTATTGATTTCTGGCGGTGCTCTAAACAAAGTGGTTTTATCATTAAACTTGATATTGAGAAGGCTTTTGACAAGATCAACTGGAACTTTATCTTAGCTATTCTTAA
GCTAAAAGGTTTCAACTCAACTTGGATAAGATGGATTCATGCTTATATTTCATATGTTAATTATTCTGTAGTTGTGAATGGGAGGCCAAGGGGAAAAATTCCAGCTTCTA
GAGGCCTTAGGCAGGGTGATCCTCTTAAACCCTTCCCTTTTTTTATTGTTATGGACTATCTTTCGAGCCTTATTTTGGATGCGGAAAATAAGGATCTCATAACAGAATGC
ATTTTTCAGAATGATGTTCATATCTCCCACTTAATGTTCGCTGATGATATACTCTTATTCTTAGTTTTTAATCCCATCAAACTTGAAAACCTCAGTATGATTATTAAATC
TTTTGAACTTGCATCTGGTATGAGAATCAATATTAAAAAATCCACTATTTCAGGTCTAAACTTGAGAACTCATATGCAAGCTCTTACTACGAAGATTTGGGGATATAAGT
ATGTTTCTATGCCTCTCACTTATCTTGGGATGCCTTTGGGTGACAACTGCAATTATGTTTCTTTCTGGGATCCAACCATTTCGAAGATTCACAACAAACTTACTCACTGG
CAATATGCTTATCTTTCTAAAGGGGGTCGTATGACAATGATACAAGCTGTTTTTTAGCATCTTCCCGTTTATACGATGTTTGTTTTTAAAGCCCCTATTTCTGTTTGTAA
AAATATTGAGAAAATTATGAAAAATGTTCTTTGGGAAGGTGTAAAGATGGAAGGTGGTTCTCATCTTGTTAATTGGCATACTGTTACTCTCCCTAAGCATGCGGGAGGGC
TTGGCATCTCCAACATTCGAAACACAAATTTGGCCTTACTTAGCAAATGGGTTTGGCGTTTTCATACTGAATGCAACCCCCTTTGGAAGGCTCTTATTCAGGCTAAGTAC
AAACCAAAGCTTGAAGGTGATTTTCCTCAATTGTGCAGGTTTGGCAGTAAAAGAGCTCCTTGGTATCATGTTTTACAAACCTTTTCTTGCATGCTTACAATGATGAAATG
GAAAATCCACAATGGTGTCTCTGTTCGTTTTTGGCATGACCCTTAGACTAACAATGGCATTCTTAAGGAGATGCACCCTCGTCTATATGCTCTTAGTTGCAAAAAAAATC
TTCTTGTGAAGGAGGCTTGGGATTCTATCAATAATTATTGGAATTTTTTCCCCAAGCTTAATCTTTTGGATAGAGAAAAAGCACATTGAGATTCTCTTTCTTCTTCTTGG
GAATGGCCTACCTCAAATGATGAAGATGAAATTCTTTGGTCGGTGGATCTAAAAGGCATTTTCTCCGTAAAATCCGTGAAAGAGGTTCTTGGGAATATTGATTCGAATAA
CTCATTTCGCCCAAATCTGCATTTTTGGACAAACGCAATTGCTAAACGGGTGAAATTCTTTATATGGACTCTCTTTCACAAAGGCATTAATACGACTGAAATTCTTCAAA
AGAGGAACCCGAAAACAGCTCTTCAACCTTCTCAATGTTGCTTATGTAGAAATAATAGTGAATCAATGGTCCATCTATTTTTTGCTTGCTCTTTTGCTGCTGGAATTTGG
AAAAAAATGCCGCTGAATGACTTCATGAGGATCCAAAGTTTCACCTCTCTAGAACATTTTTTGTTTGATTCTTTTTGCTTCAAAGCTGGATCTCAACGTTTGGACATTAT
CACAGATATTAAAGGATCTATATTATGGTGGATTTGGAGAGAGCGCAACGCTAGAATTTTCAATACGAATTATACCGAGACTTCGCCTGATTCCATCTGGGAAAAAATCA
TCTTATCGGCTGCTGAATGGTGTCAAAGATCAAATTTTTTTAGAAATTACTCTACTTCTATGATTGTAACTAACTAGCAAGCTTTCTTTTAGCCTTTTCTTTTTGTTCTG
CTGTTTTTTCTTCCTGTTTCACCCAGTTGTTTTCTCCTCTTTTTTCTCCCCCCTCCTTTCTTTTCTCTAATAAAATTCTCGTATCCCTTCTAAAAAAACCCTACTTTTTA
GAAAAAGATACTATATTAATAACAAGTATTTAAGGAATATACTAGAGACTATATATGAGCGACTAAAAAAAGTTCTCCAATTTAAAGGGATAGAAGAAGCCTCATAGTTT
TTAAATAAATGTGATTTCTTAGACCAAAAAGGAGCATTAATGACTGTCTTCCCATAACGCTTCGATCGACTTTGATAAATTTTTGAAGATGCCAGTATTCCACTCCATCC
ATATGAGATTCTAATCCAGGAATAACGATAAATAAAGCAATATATAAAAGAGTAAAGAAAGCAACAAAAGAAGATAAACTTATTTGAATGGCTTGGTGGGGCAGTTGGTT
CTCTTGTTTAGTGTTAGTCCATTTCA
Protein sequenceShow/hide protein sequence
MNLWWNSYTVTGFPGYSFMRKLKLIAKNCKEWNISFFKNSTMEQRMLTDEIARLDALEERGDISIDDVSARLFLKAKLSPILSIESHKLWQRCKKSWLHEGDENTAFFHK
ICAARKRYKFISEIVDVDGTSCVTNDRIADVFVKYFTTVYKDLTKAGCIIKNLQWNPISSVQATVLCEPFSLEEVKQSIDSLGINKAPGPDGFSIEFYKKFWNLVHPAIM
EIFVEFFHKSVINRVVNETYISLIPKTPKATKVTEYHLISLTTRTYKIISKVLAERLKHVLPGTIHSSQSAFVKGRQITDSVLITNEIIDFWRCSKQSGFIIKLDIEKAF
DKINWNFILAILKLKGFNSTWIRWIHAYISYVNYSVVVNGRPRGKIPASRGLRQGDPLKPFPFFIVMDYLSSLILDAENKDLITECIFQNDVHISHLMFADDILLFLVFN
PIKLENLSMIIKSFELASGMRINIKKSTISGLNLRTHMQALTTKIWGYKYVSMPLTYLGMPLGDNCNYVSFWDPTISKIHNKLTHWQYAYLSKGGRMTMIQAVF