CuGenDBv2

Gene ID	Sed0014021
Organism	Sechium edule (Chayote v1)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	LG04:8054154..8059955
RNA-Seq Expression	Sed0014021
Synteny	Sed0014021
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022923333.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita moschata]

8.2e-155

86.07

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNANF   STIP A+LPL S N ACFR+SHR+ HRS +S+  L+F A  NL V +NSSN      STDFD+ FPRDY +LLDQAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK+
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQ+DMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

XP_022965338.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita maxima]

1.2e-153

85.76

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNA F   STIP A+LPL S N ACFR+ HR+ HRS +S+  L+F A  NL V +NSSN      STDFD+ FPRDY +LLDQAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK 
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQ+DMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

XP_023553103.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucurbita pepo subsp. pepo]

3.1e-154

85.76

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Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNANF   STIP A+LPL S N ACFR+SHR+ HRS +S+  L+F A  NL V +NSSN      STDFD+ FPRDY +LLDQAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMT SMQLIRQFCDCFI+PLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK+
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQ+DMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

XP_038877166.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Benincasa hispida]

1.2e-153

83.48

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNANF   S IPTAILPL SPNLACFRISHR+ HRSF+ +   +F AR NL VSAN     SSN STD D+ FPRDYS+LL+QAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEG S KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGY----------------YPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRC
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSG                 YPPFFYPKLAALMKTLFP METVYYIHNFKGQKGGVLFRC
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGY----------------YPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRC

Query:  YPGPWRVLRKVRNNKYVCVHQQEDMPSLKDVALNILPSS
        YPGPW+VLRKVR NK+VCVHQQEDMPSLK+VALNILPSS
Subjt:  YPGPWRVLRKVRNNKYVCVHQQEDMPSLKDVALNILPSS

XP_038877167.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]

7.9e-158

87.93

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNANF   S IPTAILPL SPNLACFRISHR+ HRSF+ +   +F AR NL VSAN     SSN STD D+ FPRDYS+LL+QAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEG S KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK+
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQEDMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L151 DUF1995 domain-containing protein

2.4e-152

85.45

Show/hide

Query:  NANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVV------SANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        NANF   STI TA+LPL SP LACFRISHRR HRS VS+   +F  R +L V      +  SSN STD D+ FPRDYS+LL+QAKKATEAAL DNKQLME
Subjt:  NANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVV------SANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEG S KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP METVYYIHNFKGQKGGVLFR YPGPW+VLRKVR NK+
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQE+MPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

A0A1S3BKQ4 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2

9.7e-154

85.49

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Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVV------SANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLM
        SNANF   STI TA+LPL SP LACFRISHR+ HRSFVS+   +F  R NL V      +  +SN STD D+ FPRDYS+LL+QAKKATEAALRDNKQLM
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVV------SANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLM

Query:  EIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL
        EIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEG S KLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL
Subjt:  EIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL

Query:  FLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNK
        FLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP METVYYIHNFKGQKGGVLFR YPGPW+VLRKVR NK
Subjt:  FLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNK

Query:  YVCVHQQEDMPSLKDVALNILPSS
          CVHQQE+MPSLK+VALNILPSS
Subjt:  YVCVHQQEDMPSLKDVALNILPSS

A0A6J1CWD3 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1

7.5e-154

86.42

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Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTA-RTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLM
        S ANF F S+I  AILPL S NLACFRISHR+FHRSFVS   L+F A R NL VSAN     SSN ST  D+ FPRDYS+LLDQA+KATEAALRDNKQLM
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTA-RTNLVVSAN-----SSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLM

Query:  EIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL
        EIEFPTAGLESVPGD EGGIEMTESMQLIRQFCDC IDPLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL
Subjt:  EIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDEL

Query:  FLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNK
        FLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK
Subjt:  FLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNK

Query:  YVCVHQQEDMPSLKDVALNILPSS
        +VC+HQQ+DMPSLK+VALNILP++
Subjt:  YVCVHQQEDMPSLKDVALNILPSS

A0A6J1E988 protein LOW PSII ACCUMULATION 3, chloroplastic

4.0e-155

86.07

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNANF   STIP A+LPL S N ACFR+SHR+ HRS +S+  L+F A  NL V +NSSN      STDFD+ FPRDY +LLDQAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK+
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQ+DMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

A0A6J1HNL5 protein LOW PSII ACCUMULATION 3, chloroplastic

5.7e-154

85.76

Show/hide

Query:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME
        SNA F   STIP A+LPL S N ACFR+ HR+ HRS +S+  L+F A  NL V +NSSN      STDFD+ FPRDY +LLDQAKKATEAALRDNKQLME
Subjt:  SNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSN-----PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLME

Query:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
        IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKA RTRVFFPEANEVKFARNT FEGAS KLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF
Subjt:  IEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELF

Query:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY
        LVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP METVYYIHNFKGQKGGVLFRCYPGPW+VLRKVR NK 
Subjt:  LVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKY

Query:  VCVHQQEDMPSLKDVALNILPSS
        VCVHQQ+DMPSLK+VALNILPSS
Subjt:  VCVHQQEDMPSLKDVALNILPSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

1.3e-09

25.68

Show/hide

Query:  TARTNLVVSANSSN--PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCD------CFIDP
        TA +   +S+ SSN  P     L  P+ Y  L   A  +   AL+D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+  +      C + P
Subjt:  TARTNLVVSANSSN--PSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCD------CFIDP

Query:  LKAARTRVFFPEANEVKFARNTVFEGASL-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTTR
         K  + R     +   K A ++V +G S+  LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+ + E   ++T 
Subjt:  LKAARTRVFFPEANEVKFARNTVFEGASL-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTTR

Query:  KLIIFNGELDRIRS-----GYYP------------PFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKYVCV
         L +FN ELD +R+     G+ P            P FY +     KT    +    ++ N+     G LFR YPGPW+V+ K  +  + CV
Subjt:  KLIIFNGELDRIRS-----GYYP------------PFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKYVCV

AT5G48790.1 Domain of unknown function (DUF1995)

1.5e-117

77.07

Show/hide

Query:  VSANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFA
        VS   +N ++  ++ FPRDY  L++QAK+A E AL+D KQLMEIEFPT+GL SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA
Subjt:  VSANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFA

Query:  RNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALM
        + TVF G   KLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNT RKLIIFNGELDRIRSGYYP FFYPKLAAL 
Subjt:  RNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVVNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALM

Query:  KTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKYVCVHQQEDMPSLKDVALNILPSS
        KTL P METVYYIHNFKGQKGGVLFRCYPGPW+VLR+ R NKY+CVHQQE MPSLK+VAL+IL S+
Subjt:  KTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKYVCVHQQEDMPSLKDVALNILPSS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTCCAACGCGAATTTTGGGTTCATCTCAACCATTCCGACTGCGATTCTTCCACTTCAATCTCCAAATCTTGCTTGTTTCAGGATTTCGCACCGCAGATTTCATCG
GAGCTTCGTTTCCACTCCAACGCTCCAGTTTACGGCGCGTACAAATCTCGTAGTTTCGGCGAATTCGAGCAATCCGTCCACTGATTTCGACCTTCAGTTTCCTCGCGATT
ATTCGAATCTTCTTGATCAAGCGAAGAAGGCAACTGAAGCGGCTCTAAGAGATAACAAACAGTTGATGGAGATTGAATTTCCAACTGCTGGACTTGAGTCAGTTCCAGGT
GATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGATTGCTTCATCGATCCATTGAAAGCTGCACGGACCAGAGTGTTCTTTCCAGA
GGCCAACGAAGTTAAATTCGCAAGAAATACAGTGTTTGAAGGGGCCTCATTGAAGTTGGACTATCTCACCAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAG
TGAAAATGGCTGATCGAGTGAAACCAGAAGATGAGCTTTTTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTC
GTAAACACTACACGAAAGCTTATAATATTTAATGGAGAGCTCGACCGTATTAGATCTGGCTACTATCCACCATTTTTCTACCCAAAGTTGGCGGCTCTTATGAAGACTCT
CTTCCCTAACATGGAAACTGTATATTACATTCACAACTTCAAAGGACAGAAAGGGGGAGTTCTCTTCAGGTGCTACCCAGGCCCTTGGAGAGTGCTTAGAAAAGTGAGGA
ATAACAAATACGTGTGTGTGCATCAGCAAGAAGACATGCCTTCTCTCAAGGATGTTGCTTTGAACATTCTTCCATCATCTTGA

mRNA sequence

Show/hide mRNA sequence

AAAAATTTAATAAAAAATTAATTTCTAGATAGATGGGTGGAACGTTTGATTTGATTACGGCCTCTCGTTTGGAGGAGAGAAAATCAATTATCGATATTTTAATTTTTGTC
TCTCTTTTTTTTCTGTTTCAAGCTTCGAAGTGCTTCATTCTCGCAGGCGGAGCCTCGGATTGAGGAAAAATATGGATTCCAACGCGAATTTTGGGTTCATCTCAACCATT
CCGACTGCGATTCTTCCACTTCAATCTCCAAATCTTGCTTGTTTCAGGATTTCGCACCGCAGATTTCATCGGAGCTTCGTTTCCACTCCAACGCTCCAGTTTACGGCGCG
TACAAATCTCGTAGTTTCGGCGAATTCGAGCAATCCGTCCACTGATTTCGACCTTCAGTTTCCTCGCGATTATTCGAATCTTCTTGATCAAGCGAAGAAGGCAACTGAAG
CGGCTCTAAGAGATAACAAACAGTTGATGGAGATTGAATTTCCAACTGCTGGACTTGAGTCAGTTCCAGGTGATGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAA
TTGATTCGCCAATTTTGTGATTGCTTCATCGATCCATTGAAAGCTGCACGGACCAGAGTGTTCTTTCCAGAGGCCAACGAAGTTAAATTCGCAAGAAATACAGTGTTTGA
AGGGGCCTCATTGAAGTTGGACTATCTCACCAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGATCGAGTGAAACCAGAAGATGAGCTTT
TTCTGGTTGCATATCCATATTTCAATGTCAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTCGTAAACACTACACGAAAGCTTATAATATTTAATGGAGAG
CTCGACCGTATTAGATCTGGCTACTATCCACCATTTTTCTACCCAAAGTTGGCGGCTCTTATGAAGACTCTCTTCCCTAACATGGAAACTGTATATTACATTCACAACTT
CAAAGGACAGAAAGGGGGAGTTCTCTTCAGGTGCTACCCAGGCCCTTGGAGAGTGCTTAGAAAAGTGAGGAATAACAAATACGTGTGTGTGCATCAGCAAGAAGACATGC
CTTCTCTCAAGGATGTTGCTTTGAACATTCTTCCATCATCTTGAGCAGTGTGTATGTAAACTCATCCTTTGACTCTTTAGTTTACAATCATCTCAATTGTTTGATACTGT
GTAACCCCCCTTTTTTTTTCTTTTTCATATTTATTAAAATGAAGCTTATCATACTTAAAATTTAGTTGATAAAAGGTATATGGGTTAAAACATTATCTTTGAATTCTTAC
TCCCATATTGAACTTTTTCAAAAAAGAAAAATGTTGAATTGCAAATTTAGTCTCAATTTTGTAGTACCTCTAATATTTTATTAAATTCAC

Protein sequence

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MDSNANFGFISTIPTAILPLQSPNLACFRISHRRFHRSFVSTPTLQFTARTNLVVSANSSNPSTDFDLQFPRDYSNLLDQAKKATEAALRDNKQLMEIEFPTAGLESVPG
DGEGGIEMTESMQLIRQFCDCFIDPLKAARTRVFFPEANEVKFARNTVFEGASLKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAV
VNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPNMETVYYIHNFKGQKGGVLFRCYPGPWRVLRKVRNNKYVCVHQQEDMPSLKDVALNILPSS

Sed0014021 (gene) of Chayote v1 genome