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Sed0014034 (gene) of Chayote v1 genome

Gene IDSed0014034
OrganismSechium edule (Chayote v1)
Descriptionarabinogalactan peptide 23-like
Genome locationLG09:37849967..37850158
RNA-Seq ExpressionSed0014034
SyntenySed0014034
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031225 - anchored component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018419.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-1584.13Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+KN +CA LFAAA VT VVAS+ES SPAAAPGPSSAASAALPALGSL+GASLVSFVAY+LN
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
KAG7025661.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1585.71Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAATVT VVAS+ESLSPAAAPGPSSAASAALPALGSLVGASLVSFVA+  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
XP_022960230.1 arabinogalactan peptide 23-like [Cucurbita moschata]7.3e-1584.13Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAAT+T VVAS+ESLSPAAAPGPSSAASAALPALGSLVGASLVSFVA+  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
XP_023004714.1 arabinogalactan peptide 23-like [Cucurbita maxima]1.1e-1587.3Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAATVT VVAS+ESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAY  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
XP_023528634.1 arabinogalactan peptide 23 [Cucurbita pepo subsp. pepo]2.3e-1687.3Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+KN +CAALFAAA VT VVAS+ESLSPAAAPGPSSAASAALPALGSL+GASLVSFVAY+LN
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein1.1e-0866.13Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLL
        ME+K  +CA LFAAATVT VVA++E+L+P  APGPSS A   +PA+GSLVGASL+SF AY L
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLL
A0A6J1F3F5 arabinogalactan peptide 23-like7.8e-1584.13Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAATVT VVAS+ESLSPAAAPGPSSAASA LPALGSLVGASLVS VAY  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
A0A6J1H8I1 arabinogalactan peptide 23-like3.5e-1584.13Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAAT+T VVAS+ESLSPAAAPGPSSAASAALPALGSLVGASLVSFVA+  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
A0A6J1IYE9 arabinogalactan peptide 23-like6.0e-1582.54Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+KN +C ALF AA VT VVAS+ES SPAAAPGPSSAASAALPALGSL+GASLVSFVAY+LN
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
A0A6J1KX42 arabinogalactan peptide 23-like5.4e-1687.3Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +CAALFAAATVT VVAS+ESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAY  N
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 232.5e-1065.08Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +C  LFAAA++T V+A+EE  +P  APGP+SAASAALPALGSLVGASLVS  +Y L+
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.8e-0859.38Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGP-SSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +C  +FAAA++T V+A+E     A APGP +S AS A+PALGSLVGASLVS  AY LN
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGP-SSAASAALPALGSLVGASLVSFVAYLLN
AT3G57690.1 arabinogalactan protein 231.8e-1165.08Show/hide
Query:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN
        ME+K  +C  LFAAA++T V+A+EE  +P  APGP+SAASAALPALGSLVGASLVS  +Y L+
Subjt:  MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATCAAGAACTTTTCCTGTGCTGCCCTCTTCGCTGCCGCTACCGTTACGGTAGTCGTGGCCTCCGAGGAGTCTCTCTCCCCGGCCGCTGCCCCTGGCCCGAGCAG
CGCTGCCTCCGCTGCTCTTCCCGCTCTTGGATCGCTCGTCGGGGCCTCGCTTGTTTCCTTCGTTGCCTACCTCTTGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAATCAAGAACTTTTCCTGTGCTGCCCTCTTCGCTGCCGCTACCGTTACGGTAGTCGTGGCCTCCGAGGAGTCTCTCTCCCCGGCCGCTGCCCCTGGCCCGAGCAG
CGCTGCCTCCGCTGCTCTTCCCGCTCTTGGATCGCTCGTCGGGGCCTCGCTTGTTTCCTTCGTTGCCTACCTCTTGAACTGA
Protein sequenceShow/hide protein sequence
MEIKNFSCAALFAAATVTVVVASEESLSPAAAPGPSSAASAALPALGSLVGASLVSFVAYLLN