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Sed0014046 (gene) of Chayote v1 genome

Gene IDSed0014046
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG13:20849121..20849541
RNA-Seq ExpressionSed0014046
SyntenySed0014046
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063287.1 hypothetical protein E6C27_scaffold205G001100 [Cucumis melo var. makuwa]2.9e-4984Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER MASMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPFL+IF ANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
KAG6608597.1 hypothetical protein SDJN03_01939, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3879.82Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS   EER  EWKYGWAERTMASMSLPPMPLLAFLGVV+LLLSLQSQ +  DFKLFLLALPFLLIF+ANS+ V GS      RTK+RS QEAEK SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR
KGN60038.1 hypothetical protein Csa_001668 [Cucumis sativus]1.7e-4984Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER M+SMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPFL+IFVANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
TYK31488.1 hypothetical protein E5676_scaffold455G008040 [Cucumis melo var. makuwa]8.5e-4983.2Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER MASMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPF +IF ANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
XP_022940699.1 uncharacterized protein LOC111446211 [Cucurbita moschata]1.0e-3879.82Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS   EER PEWKYGWAERT+ASMS PPMPLLAFLGVV+LLLSLQSQ++ LDFKLFLLALPFLLIF+ANS+ V GS      RTK+RS QEAEK SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR
TrEMBL top hitse value%identityAlignment
A0A0A0LE80 Uncharacterized protein8.3e-5084Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER M+SMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPFL+IFVANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
A0A5A7V8G0 Uncharacterized protein1.4e-4984Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER MASMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPFL+IF ANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
A0A5A7VAG3 Uncharacterized protein2.8e-2147.73Show/hide
Query:  LVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQVVLDFKLFLLALPFLLIFVANSIAVFG------SRTKSRS---GQE
        L+ E RGP WK GWAE+ ++S++ PP PLLA LG++V+LLS+ S        ++  ++FKLF L LP + +FV NSI  +G       RTK       + 
Subjt:  LVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQVVLDFKLFLLALPFLLIFVANSIAVFG------SRTKSRS---GQE

Query:  AEKASPWGAAVLLFLLLILLWNRPYFRSKWSP
        A  ASPWGAAVLL +LL+LL  +PYF SKW P
Subjt:  AEKASPWGAAVLLFLLLILLWNRPYFRSKWSP
A0A5D3E6P1 Uncharacterized protein4.1e-4983.2Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS V+EERGPEWKYGW ER MASMSLPPMPLLAFLGVVVLLLSLQSQQ+VLDFKL LLALPF +IF ANS+AV G+      RTKSRS QEAE+ SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNRPYFRSKWSPPS
        AVLLFLLLILLWNRPYFRSKWSPPS
Subjt:  AVLLFLLLILLWNRPYFRSKWSPPS
A0A6J1FL09 uncharacterized protein LOC1114462115.1e-3979.82Show/hide
Query:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA
        MS   EER PEWKYGWAERT+ASMS PPMPLLAFLGVV+LLLSLQSQ++ LDFKLFLLALPFLLIF+ANS+ V GS      RTK+RS QEAEK SPWGA
Subjt:  MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGS------RTKSRSGQEAEKASPWGA

Query:  AVLLFLLLILLWNR
        AVLLFLLLILLWNR
Subjt:  AVLLFLLLILLWNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G42146.1 unknown protein3.9e-1537.98Show/hide
Query:  EERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQVVLDFKLFLLALPFLLIFVANSIA-----VFGSRTKSRSGQE----AEK
        E RG  WK GW E T+ + S PP+ LLA L ++ LLL L S        ++   + KLF+L LP L +FV  S++     +F S    R+ Q      E 
Subjt:  EERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQS--------QQVVLDFKLFLLALPFLLIFVANSIA-----VFGSRTKSRSGQE----AEK

Query:  ASPWGAAVLLFLLLILLWNRPYFRSKWSP
          PWG  ++L LLL+L+  + YF S W P
Subjt:  ASPWGAAVLLFLLLILLWNRPYFRSKWSP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTGGTGATAGAGGAAAGAGGTCCAGAGTGGAAGTATGGATGGGCTGAGAGAACAATGGCCTCCATGTCTCTCCCGCCCATGCCGCTGCTCGCGTTTCTCGGCGT
CGTCGTTCTTCTGCTTTCGCTGCAGTCCCAGCAGGTGGTATTGGACTTCAAGCTGTTCCTTTTGGCTTTGCCATTTCTGCTGATCTTTGTTGCAAATTCCATTGCTGTGT
TTGGTTCGAGAACCAAGAGCCGGTCGGGGCAGGAGGCCGAAAAGGCCTCGCCTTGGGGTGCGGCGGTGCTGCTGTTTCTGCTGCTGATATTACTCTGGAATCGCCCTTAC
TTTCGCTCCAAGTGGTCACCTCCATCTTAA
mRNA sequenceShow/hide mRNA sequence
GTTCATTTTGCAGATTGTTATTACCAAAACACTTCAAAACTGAAGAAGAAAAGAACATACCATGAGTTTGGTGATAGAGGAAAGAGGTCCAGAGTGGAAGTATGGATGGG
CTGAGAGAACAATGGCCTCCATGTCTCTCCCGCCCATGCCGCTGCTCGCGTTTCTCGGCGTCGTCGTTCTTCTGCTTTCGCTGCAGTCCCAGCAGGTGGTATTGGACTTC
AAGCTGTTCCTTTTGGCTTTGCCATTTCTGCTGATCTTTGTTGCAAATTCCATTGCTGTGTTTGGTTCGAGAACCAAGAGCCGGTCGGGGCAGGAGGCCGAAAAGGCCTC
GCCTTGGGGTGCGGCGGTGCTGCTGTTTCTGCTGCTGATATTACTCTGGAATCGCCCTTACTTTCGCTCCAAGTGGTCACCTCCATCTTAA
Protein sequenceShow/hide protein sequence
MSLVIEERGPEWKYGWAERTMASMSLPPMPLLAFLGVVVLLLSLQSQQVVLDFKLFLLALPFLLIFVANSIAVFGSRTKSRSGQEAEKASPWGAAVLLFLLLILLWNRPY
FRSKWSPPS