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Sed0014053 (gene) of Chayote v1 genome

Gene IDSed0014053
OrganismSechium edule (Chayote v1)
DescriptionProtein ALP1-like protein
Genome locationLG06:924156..924966
RNA-Seq ExpressionSed0014053
SyntenySed0014053
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3433792.1 hypothetical protein FNV43_RR24895 [Rhamnella rubrinervis]2.9e-4753.97Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRK------------------IFL--------RIPDAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCE
        MDE+DG++Y+K +KLLH DV                      IFL        +I   R   +  L+  HDYV+ELLNG+++RC+DCFRM K  F+ FCE
Subjt:  MDELDGETYAKVLKLLHGDVTWRK------------------IFL--------RIPDAR---KRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCE

Query:  DLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        +LK+KTNLK SR+++VQE+VAIFLL I HNERNR+VAERFQHSG+TISR FN VLKKVC LGVE+IC  + D +  EIR   KY+PFFK
Subjt:  DLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

KAF7123090.1 hypothetical protein RHSIM_Rhsim12G0067000 [Rhododendron simsii]1.5e-4346.41Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDAR-------------------------------------------------KRDLIYSHDYVIELLNGN
        MD+LD ++Y KVL+ LHGDV WR++F+ +P+ R                                                 +  ++  HDYV+E+LNG+
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDAR-------------------------------------------------KRDLIYSHDYVIELLNGN

Query:  DTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRS
        + RC   FRMK   F+AFCE LK   NLK SRYL++QE+V IFLL I HNERNR+V ERFQHSG TIS  F+ VLK VCKLGV II PP  D+IP +IR 
Subjt:  DTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRS

Query:  KSKYFPFFK
         +KYFPFFK
Subjt:  KSKYFPFFK

KAF7148819.1 hypothetical protein RHSIM_Rhsim03G0151700 [Rhododendron simsii]1.9e-4345.71Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDAR--------------------------------------------------KRDLIYSHDYVIELLNG
        MD+LD ++Y KVL+ LHGD+ WR++F+ +P+ R                                                  +  ++  HDYV+E+LNG
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDAR--------------------------------------------------KRDLIYSHDYVIELLNG

Query:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIR
        ++ RC   FRMK   F+AFCE LK   NLK SRYL++QE+V IFLL I HNERNR+V ERFQHSG TIS  F+ VLK VCKLGV II PP  D+IP +IR
Subjt:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIR

Query:  SKSKYFPFFK
          +KYFPFFK
Subjt:  SKSKYFPFFK

XP_028094390.1 uncharacterized protein LOC114294454 [Camellia sinensis]1.9e-3555.73Show/hide
Query:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKV
        P   +  ++  HDYV+E+LNG++ R  + FRM+ D F+  CE LK    L+ SRYL+VQE+V IFLL I HNERNR+V ERFQHSGQTIS+ FN VLK V
Subjt:  PDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKV

Query:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        C+LG ++I PPD D +P EIR   +++PFFK
Subjt:  CKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

XP_030481634.1 protein ALP1-like [Cannabis sativa]1.9e-3545.29Show/hide
Query:  MDELDGETYAKVLKLLHGDVT----------WRKIFLRIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEK
        +D + GE YAK ++    +V+          + +++L     R    +  H+YV+E+L+G+++RC+D FRM KD F+ FC  LK K  L+ SRYLSV+E+
Subjt:  MDELDGETYAKVLKLLHGDVT----------WRKIFLRIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEK

Query:  VAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK
        V++FL V+ HNER+R+VAERFQHS  TIS  F  VL+ VC+L  E+I PP  D +P EIR   KY+PF K
Subjt:  VAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFK

TrEMBL top hitse value%identityAlignment
A0A0A0LCZ7 Uncharacterized protein5.3e-3952.81Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNL---------------------
        MD++DGE Y K+LKL HG                      HDYVIELLNGND+RCFDCFR ++ TFV FCEDLK+KTNL                     
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNL---------------------

Query:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
                        KASRYL+VQEKVAIFLL+ISHNE NRIV ERFQHSG TIS  FN VL+KVCKLG+EII PP+
Subjt:  ----------------KASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

A0A1S3E695 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like1.4e-2650.42Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
        ++V E+LNG++T CFD FRMKK+ F+ FC +L+ K  L  SR + V+EKVA FL +I HN R+R+ + RFQHS +TISR F  VL+ VC+LG E+I   +
Subjt:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

Query:  GDNIPQEIRSKSKYFPFFK
           +P+ I++ SKY+P+FK
Subjt:  GDNIPQEIRSKSKYFPFFK

A0A2N9GND4 Uncharacterized protein2.1e-2748.84Show/hide
Query:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKL
        +++D    H+Y++E+LNG D+ C++ FRM+K+ F++ C+ LK+   L+ SR++SVQEKVAIF+L I H+ RNR++ +RFQHSG+TISR FN VL  + KL
Subjt:  RKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKL

Query:  GVEIICPPDG-DNIPQEIRSKSKYFPFFK
          ++I P      IP  IR K KY+P+FK
Subjt:  GVEIICPPDG-DNIPQEIRSKSKYFPFFK

A0A3Q7Y331 protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1-like1.4e-2650.42Show/hide
Query:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD
        ++V E+LNG++T CFD FRMKK+ F+ FC +L+ K  L  SR + V+EKVA FL +I HN R+R+ + RFQHS +TISR F  VL+ VC+LG E+I   +
Subjt:  DYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPD

Query:  GDNIPQEIRSKSKYFPFFK
           +P+ I++ SKY+P+FK
Subjt:  GDNIPQEIRSKSKYFPFFK

A0A6A4KNZ4 Myb_DNA-bind_3 domain-containing protein (Fragment)7.7e-3049.31Show/hide
Query:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYL
        M++L  ++Y  VL+ LHGDV WR++FL +P+ ++  L                  HDYV+E+LNG++ RC   FRMK   F+AFCE LK   NLK SRYL
Subjt:  MDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDL---------------IYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYL

Query:  SVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKV
        ++QE+V IFLL I HNER+R+V E FQHSG TIS  F IV+  V
Subjt:  SVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein2.5e-0930.56Show/hide
Query:  CFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGD---NIPQEIRS
        C    RM    F   C  L+   +L+ +  +S++E VA+FL +  HNE  R V  RF  + +T+ R F  VL     L  + I  P       IP+ ++ 
Subjt:  CFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGD---NIPQEIRS

Query:  KSKYFPFF
          +Y+P+F
Subjt:  KSKYFPFF

AT5G28730.1 unknown protein1.7e-1336.04Show/hide
Query:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDN---IPQ
        N+  C    RM  + F   CE L  K  L++S  +S+ E VAIFL++ + N+  R +A RF H+ +TI R F+ VLK + +L VE I P   +    I  
Subjt:  NDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDN---IPQ

Query:  EIRSKSKYFPF
         ++  ++Y+PF
Subjt:  EIRSKSKYFPF

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)9.0e-1539.18Show/hide
Query:  YVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICP
        +V ++LNG + +CF+ FRM K  F   C+ L+ +  L+ +  + ++ ++AIFL +I HN R R V E F +SG+TISR FN VL  V  +  +   P
Subjt:  YVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAERFQHSGQTISRVFNIVLKKVCKLGVEIICP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCGATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTGAATGGAAACGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGATACATTCGTAGCTTTTTGTGAAGATTTAA
AAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGTAGCTGAAAGG
TTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAAAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGAGATAATATACCACA
AGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAAGGTAAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGCTAGATGGAGAGACTTATGCCAAAGTACTCAAACTTTTGCATGGAGATGTTACTTGGAGAAAGATATTTTTGCGCATACCCGATGCAAGGAAGAGAGATTT
GATTTATAGTCATGATTATGTGATTGAGTTATTGAATGGAAACGACACAAGATGTTTTGATTGCTTTAGGATGAAAAAAGATACATTCGTAGCTTTTTGTGAAGATTTAA
AAGCGAAGACAAATTTGAAAGCATCTAGATATCTTTCTGTTCAAGAGAAAGTTGCCATTTTTTTATTAGTCATATCACATAATGAAAGAAATCGTATAGTAGCTGAAAGG
TTTCAACATTCAGGTCAAACTATTTCTCGAGTTTTTAACATTGTTTTGAAAAAAGTTTGCAAGCTTGGTGTTGAAATTATTTGTCCACCCGACGGAGATAATATACCACA
AGAGATTAGATCGAAGTCTAAATACTTCCCATTTTTCAAGGTAAGAGCTTAA
Protein sequenceShow/hide protein sequence
MDELDGETYAKVLKLLHGDVTWRKIFLRIPDARKRDLIYSHDYVIELLNGNDTRCFDCFRMKKDTFVAFCEDLKAKTNLKASRYLSVQEKVAIFLLVISHNERNRIVAER
FQHSGQTISRVFNIVLKKVCKLGVEIICPPDGDNIPQEIRSKSKYFPFFKVRA