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Sed0014055 (gene) of Chayote v1 genome

Gene IDSed0014055
OrganismSechium edule (Chayote v1)
DescriptionProtein SDA1
Genome locationLG13:14453732..14454362
RNA-Seq ExpressionSed0014055
SyntenySed0014055
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR007949 - SDA1 domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465277.1 PREDICTED: protein SDA1 homolog isoform X1 [Cucumis melo]8.1e-2752.85Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD
        +GLFRE CPSL  KKD G PIDPKARPKAYGEV + SNI GIELL+  DG NS+D D + N   +     DDLDQ VD     S DG  NQ+  SSDA D
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD

Query:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
        N++SSD     E+ELT D DSA EVD D   DD E  +DSS  ES  D++  +S +EQ+T +   A+S+EIVE  S    T+S+D K +KRK+
Subjt:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

XP_023548412.1 protein SDA1 homolog [Cucurbita pepo subsp. pepo]6.2e-2752.17Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESILG--DDLDQAVDSSDGGDNQISSDAGDNQISSDSEI
        +GLFRE+CPSL VKKD G P DPKA+PKAYGEV + S+I GIELLQ  DG NS+D+D +      G  DDL+Q VDSSD GDNQI SD+G +        
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESILG--DDLDQAVDSSDGGDNQISSDAGDNQISSDSEI

Query:  NGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
          EDELT+D  SA +VD D   DD E+ +DSS+ E E D++  +S  E       +A+S+EIVE  S    T SRD KL+KRK+
Subjt:  NGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

XP_038895112.1 protein SDA1 homolog isoform X1 [Benincasa hispida]1.9e-2852.66Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ
        +GL+RE CPSL  KKD G P DPKARPKAYGEV + SNI GIELLQH DG NS+D+  +N+E+I     DDLDQ VDS + G D+ +     SSD GD+Q
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ

Query:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY
        +SSDS  + +DEL  DVDSA EVD D   DD E+ DDSS  ESE D++  +S  E++T + +EA  +      + TN  D KL+KRK+
Subjt:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY

XP_038895113.1 protein SDA1 homolog isoform X2 [Benincasa hispida]1.9e-2852.66Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ
        +GL+RE CPSL  KKD G P DPKARPKAYGEV + SNI GIELLQH DG NS+D+  +N+E+I     DDLDQ VDS + G D+ +     SSD GD+Q
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ

Query:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY
        +SSDS  + +DEL  DVDSA EVD D   DD E+ DDSS  ESE D++  +S  E++T + +EA  +      + TN  D KL+KRK+
Subjt:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY

XP_038895114.1 protein SDA1 homolog isoform X3 [Benincasa hispida]1.9e-2852.66Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ
        +GL+RE CPSL  KKD G P DPKARPKAYGEV + SNI GIELLQH DG NS+D+  +N+E+I     DDLDQ VDS + G D+ +     SSD GD+Q
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL---GDDLDQAVDS-SDGGDNQI-----SSDAGDNQ

Query:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY
        +SSDS  + +DEL  DVDSA EVD D   DD E+ DDSS  ESE D++  +S  E++T + +EA  +      + TN  D KL+KRK+
Subjt:  ISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY

TrEMBL top hitse value%identityAlignment
A0A1S3CNF1 Protein SDA13.9e-2752.85Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD
        +GLFRE CPSL  KKD G PIDPKARPKAYGEV + SNI GIELL+  DG NS+D D + N   +     DDLDQ VD     S DG  NQ+  SSDA D
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD

Query:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
        N++SSD     E+ELT D DSA EVD D   DD E  +DSS  ES  D++  +S +EQ+T +   A+S+EIVE  S    T+S+D K +KRK+
Subjt:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

A0A1S3CNI9 Protein SDA13.9e-2752.85Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD
        +GLFRE CPSL  KKD G PIDPKARPKAYGEV + SNI GIELL+  DG NS+D D + N   +     DDLDQ VD     S DG  NQ+  SSDA D
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD

Query:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
        N++SSD     E+ELT D DSA EVD D   DD E  +DSS  ES  D++  +S +EQ+T +   A+S+EIVE  S    T+S+D K +KRK+
Subjt:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

A0A5A7T0V2 Protein SDA1-like protein isoform X23.9e-2752.85Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD
        +GLFRE CPSL  KKD G PIDPKARPKAYGEV + SNI GIELL+  DG NS+D D + N   +     DDLDQ VD     S DG  NQ+  SSDA D
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESIL----GDDLDQAVD-----SSDGGDNQI--SSDAGD

Query:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
        N++SSD     E+ELT D DSA EVD D   DD E  +DSS  ES  D++  +S +EQ+T +   A+S+EIVE  S    T+S+D K +KRK+
Subjt:  NQISSDSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

A0A6J1GQ82 Protein SDA13.9e-2752.41Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSND--EDTNNNESIL---GDDLDQAVDSSDGGDNQISSDAGDNQISSD
        +GLFRE+CPSL VKKD G P DPKA+PKAYGEV + S+I GIELLQ  DG NS+D  +D ++ E+I     DDL+QAVDSSD GDNQI SD+G +     
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSND--EDTNNNESIL---GDDLDQAVDSSDGGDNQISSDAGDNQISSD

Query:  SEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
             EDELT+D  SA +VD D   DD E+ +DSS+ E E D++  +S  E       +A+S+EIVE  S    T SRD KL+KRK+
Subjt:  SEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

A0A6J1JM56 Protein SDA12.5e-2652.13Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNS---NDEDTNNNESIL---GDDLDQAVDSSDGGDNQISSDAGDNQISS
        +GLFRE+CPSL VKKD G P DPKA+PKAYGEV + S+I GIELLQ  DG NS   +D+D ++ E+I     DDL+ AVDSSD GDNQI SD+G +    
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNS---NDEDTNNNESIL---GDDLDQAVDSSDGGDNQISSDAGDNQISS

Query:  DSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY
              EDELT+D  SA +VD D   DD E+ +DSS  E E D++  +S  E       +A+S+EIVEA S    T SRD KL+KRK+
Subjt:  DSEINGEDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACS---GTNSRDFKLEKRKY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13160.1 ARM repeat superfamily protein2.1e-0937.11Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNN--ESILGDDLDQAVDSSD-GGDNQISSDAGDNQISSDSE
        + LFRE+ PSL VKKD G P      PK YGE  + SN+  +ELLQ  D  + +D D +++  E  +GDD++Q +   D G +++   D+ D     D  
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNN--ESILGDDLDQAVDSSD-GGDNQISSDAGDNQISSDSE

Query:  INGEDELTKDVDSAIEVDVDNTIDDYESGD-DSSKEESEVDDKDGN-SDKEQETYFDKE
         N ED+   D+D++I  D D  ++D +  D DS  EE E +++DG  SD   E   +KE
Subjt:  INGEDELTKDVDSAIEVDVDNTIDDYESGD-DSSKEESEVDDKDGN-SDKEQETYFDKE

AT4G31520.1 SDA1 family protein2.2e-0632.37Show/hide
Query:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESILGDDLDQAVDSSDGGDNQISSDAGDNQISSDSEING
        + LFRE+ P L VKKD G P  P ARPK YGEV + SN+  ++LLQ  D     D++     S   DD++Q + + D  +   +     N    D+ ++G
Subjt:  MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESILGDDLDQAVDSSDGGDNQISSDAGDNQISSDSEING

Query:  EDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDK
        ++E  K+     E D +N  D+ E+  + S    +   K
Subjt:  EDELTKDVDSAIEVDVDNTIDDYESGDDSSKEESEVDDK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTATTTAGAGAGCTCTGTCCATCCCTACAAGTTAAGAAGGATGGTGGGTGCCCTATCGATCCAAAGGCAAGACCTAAAGCTTATGGAGAAGTATTTATACCATC
TAATATTTCTGGTATCGAGTTATTACAACATGGTGATGGTTACAATAGCAATGATGAGGACACAAACAACAATGAGAGTATTTTAGGTGATGACCTTGATCAAGCGGTTG
ACTCTAGTGATGGTGGAGATAATCAAATCTCTAGTGATGCTGGAGATAATCAAATCTCAAGTGATAGTGAAATAAATGGCGAAGATGAATTAACAAAAGATGTTGATTCA
GCTATTGAAGTTGATGTAGATAACACTATAGATGATTATGAAAGTGGCGATGATTCTAGCAAGGAAGAATCGGAGGTAGATGATAAGGATGGGAATAGTGATAAGGAACA
AGAAACATATTTTGACAAAGAGGCTTTGTCAAATGAGATTGTTGAGGCTTGTTCTGGAACTAATTCTAGAGATTTTAAGCTGGAGAAAAGGAAATATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGATTATTTAGAGAGCTCTGTCCATCCCTACAAGTTAAGAAGGATGGTGGGTGCCCTATCGATCCAAAGGCAAGACCTAAAGCTTATGGAGAAGTATTTATACCATC
TAATATTTCTGGTATCGAGTTATTACAACATGGTGATGGTTACAATAGCAATGATGAGGACACAAACAACAATGAGAGTATTTTAGGTGATGACCTTGATCAAGCGGTTG
ACTCTAGTGATGGTGGAGATAATCAAATCTCTAGTGATGCTGGAGATAATCAAATCTCAAGTGATAGTGAAATAAATGGCGAAGATGAATTAACAAAAGATGTTGATTCA
GCTATTGAAGTTGATGTAGATAACACTATAGATGATTATGAAAGTGGCGATGATTCTAGCAAGGAAGAATCGGAGGTAGATGATAAGGATGGGAATAGTGATAAGGAACA
AGAAACATATTTTGACAAAGAGGCTTTGTCAAATGAGATTGTTGAGGCTTGTTCTGGAACTAATTCTAGAGATTTTAAGCTGGAGAAAAGGAAATATTAA
Protein sequenceShow/hide protein sequence
MGLFRELCPSLQVKKDGGCPIDPKARPKAYGEVFIPSNISGIELLQHGDGYNSNDEDTNNNESILGDDLDQAVDSSDGGDNQISSDAGDNQISSDSEINGEDELTKDVDS
AIEVDVDNTIDDYESGDDSSKEESEVDDKDGNSDKEQETYFDKEALSNEIVEACSGTNSRDFKLEKRKY