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Sed0014072 (gene) of Chayote v1 genome

Gene IDSed0014072
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:21648299..21648959
RNA-Seq ExpressionSed0014072
SyntenySed0014072
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585732.1 CXXC motif containing zinc binding protein, partial [Cucurbita argyrosperma subsp. sororia]7.3e-0776.79Show/hide
Query:  SLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
        SLM+L+AL+IAVASVAAQEAP+PSPASPA S+APSFVSAC  A   AL +GSTLRI
Subjt:  SLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
KAG6598305.1 hypothetical protein SDJN03_08083, partial [Cucurbita argyrosperma subsp. sororia]8.6e-0873.02Show/hide
Query:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
        MA VS+ASL++L+A++ AVASVAA EAP+PSPASPA S+APSFVSAC  AA  ALA GSTLRI
Subjt:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
KGN62403.1 hypothetical protein Csa_018595 [Cucumis sativus]4.3e-0769.84Show/hide
Query:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
        MAA+S+ SL++L+AL+ A++SVAAQEAP+PSPASPA S+APS VSAC  AA  ALA GSTLRI
Subjt:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
TrEMBL top hitse value%identityAlignment
A0A0A0LKU1 Uncharacterized protein2.1e-0769.84Show/hide
Query:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
        MAA+S+ SL++L+AL+ A++SVAAQEAP+PSPASPA S+APS VSAC  AA  ALA GSTLRI
Subjt:  MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTTTCCAGAGCTTCTCTCATGTCTCTACTCGCACTCCTCATCGCCGTCGCTTCCGTCGCCGCTCAGGAGGCTCCGTCGCCCAGCCCTGCTTCCCCTGCTCC
CTCCCTTGCTCCCTCCTTCGTCTCCGCTTGCTTCGCCGCCGCCGCCGCCGCTCTCGCCGTCGGATCTACTCTCAGGATCTGA
mRNA sequenceShow/hide mRNA sequence
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATCTCCTTCAACGGATTTCGCTTCTCATTTCCAACGAAAGCGGTCCTTCTCGCCGGAACCCTAACCGATCATTATCT
GAATCAATGGCCGCCGTTTCCAGAGCTTCTCTCATGTCTCTACTCGCACTCCTCATCGCCGTCGCTTCCGTCGCCGCTCAGGAGGCTCCGTCGCCCAGCCCTGCTTCCCC
TGCTCCCTCCCTTGCTCCCTCCTTCGTCTCCGCTTGCTTCGCCGCCGCCGCCGCCGCTCTCGCCGTCGGATCTACTCTCAGGATCTGATTTCGCCTCTATTTGTGTGCTC
TGATTTTGTCTTAGGCGTTTTCATTGGATTTTGATTTCTGGTACAGAGGACCTCTTTTGTTGAACCGTTCTTATATTTTCTATATAGAATGCAGGCTTTGATTGTTTGAT
GATGATTTGTGCTATATTTTGTTACAATTAGTAAATAAATTGTTTCCTTCTTTTCGTATCTCTTCTTCTTCTTCTTCTTGTTGCCTCGCCTATTTCATATTATCCATATC
GCCACTGGTATTGACATGAAATCTTACCTGCTGTTGATTTTCAAATTGGAGATGGGGTGAAAAAAACATTTATAATGGAGGTTGCCGATGATTCAATTATGCAGTTCAAA
A
Protein sequenceShow/hide protein sequence
MAAVSRASLMSLLALLIAVASVAAQEAPSPSPASPAPSLAPSFVSACFAAAAAALAVGSTLRI