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Sed0014101 (gene) of Chayote v1 genome

Gene IDSed0014101
OrganismSechium edule (Chayote v1)
DescriptionWD repeat-containing protein 53
Genome locationLG08:35883479..35883955
RNA-Seq ExpressionSed0014101
SyntenySed0014101
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583945.1 hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4363.53Show/hide
Query:  ESQQILENFESLWFFATVFSDQ--PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQ
        E QQ+L+N +SLWFFATVFS++  PPPP    +Q PTQ+D  EP G EIATPIFQNQQNV +ER I D   +E       + TEE+RKSR RR  C   Q
Subjt:  ESQQILENFESLWFFATVFSDQ--PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQ

Query:  RRKIVGEMDLSNSVKEICECWVLEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        RRKIVGEMDLS++VKEICECW+LE+RI  GN Y     +MKKKKM   ED MAMKEHIRSWAYAVAC VR
Subjt:  RRKIVGEMDLSNSVKEICECWVLEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR

KAG7019562.1 hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4464.29Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR
        E QQ+L+N +SLWFFATVFS++ PPP  + +Q PTQ D VEP G EIATPIFQNQQNV +ER I D   +E       + TEE+RKSR RR  C   QRR
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR

Query:  KIVGEMDLSNSVKEICECWVLEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        KIVGEMDLS++VKEICECW+LE+RI  GN Y     +MKKKKM   ED MAMKEHIRSWAYAVAC VR
Subjt:  KIVGEMDLSNSVKEICECWVLEERIRNGNYY-----QMKKKKMASIEDDMAMKEHIRSWAYAVACAVR

XP_022927166.1 uncharacterized protein LOC111434099 [Cucurbita moschata]1.3e-4464.88Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR
        E QQ+L+N +SLWFFATVFS++ PPP    +Q PTQ D VEP G EIATPIFQNQQNV +ER I D   +E       + TEE+RKSR RR  C   QRR
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR

Query:  KIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        KIVGEMDLS++VKEICECW+LE+RI  GN YQ     MKKKKM   ED MAMKEHIRSWAYAVAC VR
Subjt:  KIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR

XP_023520136.1 uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo]3.8e-4463.37Show/hide
Query:  ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCW
        E QQ+L+N +SLWFFATVFS++    PPPP    +Q PTQ+D VEP G EIATPIFQNQQNV +ER I D   +E       + TEE+RKSR RR  C  
Subjt:  ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCW

Query:  SQRRKIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR
         QRRKIVGEMDLS++VKEICECW+LE+RI  GN YQ     MKKKKM   ED MAMKEHIRSWA+AVAC VR
Subjt:  SQRRKIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR

XP_038895160.1 uncharacterized protein LOC120083464 [Benincasa hispida]3.8e-4464.42Show/hide
Query:  ESQQILENFESLWFFATVFSDQ-PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQN--VDERRIEDCDGSEMKTEEKRKSRIRRRSCCW--SQRRKIV
        E QQ+LEN++SLWFFATVFS++ PPPP    ++NPTQ+D VEP GEEIATP+  N+QN   DE++IE+  G  +KTEEK + R  R   CW   QRRKIV
Subjt:  ESQQILENFESLWFFATVFSDQ-PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQN--VDERRIEDCDGSEMKTEEKRKSRIRRRSCCW--SQRRKIV

Query:  GEMDLSNSVKEICECWVLEE-RIRNGNYYQMKK--KKMASIEDDMAMKEHIRSWAYAVACAVR
        GEMDLS +VKEICECW+ EE RI  GN YQ KK  KKM   ED MAMKEHIRSWAYAVAC VR
Subjt:  GEMDLSNSVKEICECWVLEE-RIRNGNYYQMKK--KKMASIEDDMAMKEHIRSWAYAVACAVR

TrEMBL top hitse value%identityAlignment
A0A0A0LX63 Uncharacterized protein1.4e-3356.88Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRR---RSCCWSQRRK-IVG
        E QQ+LENF+SLWFFATVFS++ PP  G     P Q+D V  +GEEIATPI +N++N        C+  EM+TEE+ + R +    RS    QR+K IVG
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRR---RSCCWSQRRK-IVG

Query:  EMDLSNSVKEICECWVLEE-RIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        E+DLS +VKEICECW  EE RI  G     K KKM S ED MAMKEHIRSWAYAVAC VR
Subjt:  EMDLSNSVKEICECWVLEE-RIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR

A0A1S3B8X4 uncharacterized protein LOC1034870563.2e-3357.32Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMD
        E QQ+ ENF+SLWFF+TVFS++ PP     ++ P Q+D VEP+GEEIATPI +N++N D    ++ +  EM  EEKR+    RRS    QRRK +VGE+D
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMD

Query:  LSNSVKEICECWVLE-ERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        LS +VKEICECW  E  RI  G     K KKM S ED MAMKEHIRSWAYAVAC VR
Subjt:  LSNSVKEICECWVLE-ERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR

A0A5A7UQZ2 Uncharacterized protein3.2e-3357.32Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMD
        E QQ+ ENF+SLWFF+TVFS++ PP     ++ P Q+D VEP+GEEIATPI +N++N D    ++ +  EM  EEKR+    RRS    QRRK +VGE+D
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRK-IVGEMD

Query:  LSNSVKEICECWVLE-ERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        LS +VKEICECW  E  RI  G     K KKM S ED MAMKEHIRSWAYAVAC VR
Subjt:  LSNSVKEICECWVLE-ERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR

A0A6J1EGY0 uncharacterized protein LOC1114340996.3e-4564.88Show/hide
Query:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR
        E QQ+L+N +SLWFFATVFS++ PPP    +Q PTQ D VEP G EIATPIFQNQQNV +ER I D   +E       + TEE+RKSR RR  C   QRR
Subjt:  ESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCWSQRR

Query:  KIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR
        KIVGEMDLS++VKEICECW+LE+RI  GN YQ     MKKKKM   ED MAMKEHIRSWAYAVAC VR
Subjt:  KIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR

A0A6J1KF61 uncharacterized protein LOC1114952575.0e-4261.63Show/hide
Query:  ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCW
        E QQ+L+N +SLWFFATVFS++    PP P    +Q PT++D VE  G EIATPIFQNQQNV DER I D   +E       + TEE+RKSR RR  C  
Subjt:  ESQQILENFESLWFFATVFSDQ----PPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNV-DERRIEDCDGSE-------MKTEEKRKSRIRRRSCCW

Query:  SQRRKIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR
         QRR+IVGEMDLS++VKEICECW+LE+RI  GN YQ     MKKKK+   ED MAMKEHIRSWAYAVAC VR
Subjt:  SQRRKIVGEMDLSNSVKEICECWVLEERIRNGNYYQ-----MKKKKMASIEDDMAMKEHIRSWAYAVACAVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACTGAAAGCCAGCAGATTTTGGAAAATTTCGAGTCTCTTTGGTTCTTCGCCACCGTATTTTCCGACCAACCGCCGCCGCCGGCCGGTATAAATCTCCAAAATCC
CACTCAAAGCGACGCCGTTGAGCCAATCGGAGAAGAAATCGCGACACCCATTTTTCAAAATCAGCAAAATGTGGATGAAAGAAGAATCGAAGATTGTGATGGGTCTGAAA
TGAAAACAGAGGAGAAGAGAAAAAGCAGAATTAGAAGAAGATCTTGTTGTTGGAGCCAGAGGAGAAAAATTGTGGGAGAAATGGATCTGAGTAATTCTGTGAAGGAGATT
TGTGAATGTTGGGTGTTGGAAGAGAGAATTAGAAATGGGAATTATTATCAGATGAAGAAGAAAAAGATGGCTTCAATTGAAGATGATATGGCGATGAAAGAGCACATTAG
ATCGTGGGCTTATGCAGTGGCTTGTGCTGTTAGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACTGAAAGCCAGCAGATTTTGGAAAATTTCGAGTCTCTTTGGTTCTTCGCCACCGTATTTTCCGACCAACCGCCGCCGCCGGCCGGTATAAATCTCCAAAATCC
CACTCAAAGCGACGCCGTTGAGCCAATCGGAGAAGAAATCGCGACACCCATTTTTCAAAATCAGCAAAATGTGGATGAAAGAAGAATCGAAGATTGTGATGGGTCTGAAA
TGAAAACAGAGGAGAAGAGAAAAAGCAGAATTAGAAGAAGATCTTGTTGTTGGAGCCAGAGGAGAAAAATTGTGGGAGAAATGGATCTGAGTAATTCTGTGAAGGAGATT
TGTGAATGTTGGGTGTTGGAAGAGAGAATTAGAAATGGGAATTATTATCAGATGAAGAAGAAAAAGATGGCTTCAATTGAAGATGATATGGCGATGAAAGAGCACATTAG
ATCGTGGGCTTATGCAGTGGCTTGTGCTGTTAGATGA
Protein sequenceShow/hide protein sequence
METESQQILENFESLWFFATVFSDQPPPPAGINLQNPTQSDAVEPIGEEIATPIFQNQQNVDERRIEDCDGSEMKTEEKRKSRIRRRSCCWSQRRKIVGEMDLSNSVKEI
CECWVLEERIRNGNYYQMKKKKMASIEDDMAMKEHIRSWAYAVACAVR