CuGenDBv2

Gene ID	Sed0014110
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L13
Genome location	LG13:2080511..2082824
RNA-Seq Expression	Sed0014110
Synteny	Sed0014110
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001380 - Ribosomal protein L13e IPR018256 - Ribosomal protein L13e, conserved site

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_011653106.1 60S ribosomal protein L13-3 [Cucumis sativus]

4.5e-106

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRP+VHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVT+EMKSFKAYDKLR+ERTNARHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKE+KK
Subjt:  EKEEKK

XP_022923040.1 60S ribosomal protein L13-1 [Cucurbita moschata]

1.7e-105

97.09

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022941800.1 60S ribosomal protein L13-1-like [Cucurbita moschata]

3.8e-105

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLR ERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022984589.1 60S ribosomal protein L13-1 [Cucurbita maxima]

1.0e-105

97.09

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

XP_022990054.1 60S ribosomal protein L13-1-like [Cucurbita maxima]

1.7e-105

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VE+VKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KU76 60S ribosomal protein L13

2.2e-106

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRP+VHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVT+EMKSFKAYDKLR+ERTNARHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKE+KK
Subjt:  EKEEKK

A0A6J1E5R8 60S ribosomal protein L13

8.3e-106

97.09

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1FUT5 60S ribosomal protein L13

1.8e-105

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLR ERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1J2K7 60S ribosomal protein L13

4.9e-106

97.09

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VELVKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

A0A6J1JSD3 60S ribosomal protein L13

8.3e-106

96.6

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPS HFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        RNRSLE LQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKA VE+VKVT+EMKSFKAYDKLRIERTN RHVGARLKRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

SwissProt top hits

e value

%identity

Alignment

P41127 60S ribosomal protein L13-1

2.6e-96

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELANATQVQG YLPI REK ++ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41128 60S ribosomal protein L13-1

3.2e-94

83.01

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELK+AGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELANATQVQG Y+PI REK + ELVK+T EMKS KA+DK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

P41129 60S ribosomal protein L13-2

3.2e-94

83.01

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPTAGPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI +DHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ+NVQRLKTYKAK+V+FPRRARK KAGDST EELANATQVQG Y+PI REK ++ELVK+T EMKS  AYDK+R+ERTN RH GAR KRAA+A
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9FF90 60S ribosomal protein L13-3

4.4e-96

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPSSHFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELANATQVQG Y+PI   KA++ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Q9SMT4 Putative 60S ribosomal protein L13-2

3.1e-81

74.27

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+K W+NYV+T FNQPA KTRRR ARQ KAVK FPRPTAGP+RP+VH QTL YNMKVRAG+GF+LEELKAAGIPKKLAPTIGI VDH R
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEG Q NVQRLKTYKAK+V+FPR AR  K GDS  +ELANATQVQ  ++PI RE  ++ELVK+T +MK F AYDK+R+E  N RH G R KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Arabidopsis top hits

e value

%identity

Alignment

AT3G49010.1 breast basic conserved 1

1.8e-97

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELANATQVQG YLPI REK ++ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.2 breast basic conserved 1

1.8e-97

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELANATQVQG YLPI REK ++ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.3 breast basic conserved 1

1.8e-97

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ NVQRLKTYK K+V+FPRRARK KAGDSTPEELANATQVQG YLPI REK ++ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT3G49010.4 breast basic conserved 1

1.7e-95

83.98

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIP+ HF+KHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVR G+GF+LEELKAAGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ NVQRLKTYK K+V+FPRRAR  KAGDSTPEELANATQVQG YLPI REK ++ELVK+T EMKSFKA+DK+R+ERTN RH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

AT5G23900.1 Ribosomal protein L13e family protein

3.1e-97

84.47

Show/hide

Query:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR
        MKHNNVIPSSHFRKHWQNYV+TWFNQPARKTRRR ARQ+KAVK FPRPT+GPLRP+VHGQTLKYNMKVRAG+GF+LEELK AGIPKKLAPTIGI VDHRR
Subjt:  MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRR

Query:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA
        +NRSLEGLQ+NVQRLKTYKAK+VVFPRR+R+ KAGDSTPEELANATQVQG Y+PI   KA++ELVK+T ++K+FKAYDK+R+ERTNARH GAR KRAAEA
Subjt:  RNRSLEGLQANVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEA

Query:  EKEEKK
        EKEEKK
Subjt:  EKEEKK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAACACAACAATGTTATCCCAAGCAGCCACTTTAGGAAGCACTGGCAGAACTATGTCAGGACATGGTTCAACCAACCAGCCAGAAAAACCAGAAGAAGAAATGCTCG
GCAGGAGAAAGCTGTGAAGAACTTTCCCCGCCCAACTGCCGGACCACTCCGCCCTATCGTTCATGGACAGACATTGAAGTACAACATGAAAGTGAGAGCGGGTAGAGGTT
TTTCTCTCGAGGAGCTCAAGGCTGCTGGTATCCCCAAGAAACTAGCACCAACTATCGGAATTGTTGTTGACCATCGTCGCAGGAATCGCTCACTTGAAGGTCTACAGGCT
AATGTTCAGAGGCTGAAGACATACAAGGCTAAGGTGGTCGTCTTCCCAAGACGTGCTCGCAAATTCAAGGCTGGTGATTCTACTCCGGAGGAGCTTGCAAATGCCACCCA
AGTCCAAGGACCATACCTGCCTATTGGACGTGAGAAGGCCTCGGTTGAGCTCGTCAAGGTCACTGATGAGATGAAATCATTCAAGGCATACGACAAGCTACGTATCGAGA
GGACGAATGCACGACATGTTGGTGCTAGATTGAAGAGGGCAGCAGAGGCAGAGAAGGAAGAGAAGAAATAG

mRNA sequence

Show/hide mRNA sequence

CTTATATGAGGGTTCCGGCTAATCAACTCATCGGCTGGAAATTGGAATCGAGAAAGGTCACTCTTCTCCGCATTGTTTTAAAAAATGAAACACAACAATGTTATCCCAAG
CAGCCACTTTAGGAAGCACTGGCAGAACTATGTCAGGACATGGTTCAACCAACCAGCCAGAAAAACCAGAAGAAGAAATGCTCGGCAGGAGAAAGCTGTGAAGAACTTTC
CCCGCCCAACTGCCGGACCACTCCGCCCTATCGTTCATGGACAGACATTGAAGTACAACATGAAAGTGAGAGCGGGTAGAGGTTTTTCTCTCGAGGAGCTCAAGGCTGCT
GGTATCCCCAAGAAACTAGCACCAACTATCGGAATTGTTGTTGACCATCGTCGCAGGAATCGCTCACTTGAAGGTCTACAGGCTAATGTTCAGAGGCTGAAGACATACAA
GGCTAAGGTGGTCGTCTTCCCAAGACGTGCTCGCAAATTCAAGGCTGGTGATTCTACTCCGGAGGAGCTTGCAAATGCCACCCAAGTCCAAGGACCATACCTGCCTATTG
GACGTGAGAAGGCCTCGGTTGAGCTCGTCAAGGTCACTGATGAGATGAAATCATTCAAGGCATACGACAAGCTACGTATCGAGAGGACGAATGCACGACATGTTGGTGCT
AGATTGAAGAGGGCAGCAGAGGCAGAGAAGGAAGAGAAGAAATAGATTGCTAGAACTGCTTAAAGGTCGTCTATTTTCCTAATTTTGGTTTTTTTTTCCTTAAATATTTT
GGATTTGACGTATCTTCTGGACTTATTTATTTGATAGATGAAATTTCTGAGTTCGTGGATTCTACGGTTAGTCAATGATCTTGTTTTGTGTATTATCGATAATTCGTCGT
GGTTTATCTCATCGCTTTGCAATCTTTGTATTTCGTTTGATAGTCGATCTCAAATACTTATGACAAACACTATGTGTTAGGTAGGCTATTATAATATAAATTATGATAAA
TTGGATTTAGGAG

Protein sequence

Show/hide protein sequence

MKHNNVIPSSHFRKHWQNYVRTWFNQPARKTRRRNARQEKAVKNFPRPTAGPLRPIVHGQTLKYNMKVRAGRGFSLEELKAAGIPKKLAPTIGIVVDHRRRNRSLEGLQA
NVQRLKTYKAKVVVFPRRARKFKAGDSTPEELANATQVQGPYLPIGREKASVELVKVTDEMKSFKAYDKLRIERTNARHVGARLKRAAEAEKEEKK

Sed0014110 (gene) of Chayote v1 genome