; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014117 (gene) of Chayote v1 genome

Gene IDSed0014117
OrganismSechium edule (Chayote v1)
Descriptiontranscription termination factor MTEF1, chloroplastic
Genome locationLG06:39850164..39851314
RNA-Seq ExpressionSed0014117
SyntenySed0014117
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR003690 - Transcription termination factor, mitochondrial/chloroplastic
IPR038538 - MTERF superfamily, mitochondrial/chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013135.1 Transcription termination factor MTEF1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]2.7e-13685.52Show/hide
Query:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        +LF FP+SSAPS + LRNPNF KP+   +ISLN QFSD+SDAGLLFRQKILYLENHLHVDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRVL
Subjt:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH
        DMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLSH
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH

Query:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        +DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

XP_022945324.1 transcription termination factor MTEF1, chloroplastic [Cucurbita moschata]1.8e-13585.19Show/hide
Query:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        +LF FP+SSAPS + LRNPNF KP+   +ISLN QFSD+SDAGLLFRQKILYLENHL+VDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRVL
Subjt:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH
        DMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLSH
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH

Query:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        +DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

XP_022968085.1 transcription termination factor MTEF1, chloroplastic [Cucurbita maxima]4.0e-13584.23Show/hide
Query:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRV
        C+ F FP+SS PS + +RNPNF KP+   +ISLN QFSD+SDAGL FRQKILYLENHLHVDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRV
Subjt:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRV

Query:  LDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLS
        LDMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLS
Subjt:  LDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLS

Query:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        H+DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

XP_023542512.1 transcription termination factor MTEF1, chloroplastic [Cucurbita pepo subsp. pepo]4.7e-13685.52Show/hide
Query:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        +LF FP+SSAPS   LRNPNF KP+   +ISLN QFSD+SDAGLLFRQKILYLENHLHVDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRVL
Subjt:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH
        DMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLSH
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH

Query:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        +DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

XP_038892906.1 transcription termination factor MTEF1, chloroplastic [Benincasa hispida]8.5e-13083.39Show/hide
Query:  FPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVLDM
        F FP+SS  +   LRNPNF KP+   ++SLN QFSD+SDAGLLFR+KILYLENHL+VDFRKAFRENP+SRSATL  +KSVE+CLSSMGL+LSA+GRVLDM
Subjt:  FPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVLDM

Query:  YPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHED
        YP+LLT++PD  LYPIF+FLL+E QIPFP IRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVG NAITCQTTMLLVSSVE TLLPKI YLESLGLSHED
Subjt:  YPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHED

Query:  VVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        VVNMVLRSPGLLTYS+QNNL+ KV+YFL DMKGDLLELK FPQYFSFSLERKIKPRHR LV+HGLSLPLS+MLK+SDGEFTARLIEMRLQS TAD
Subjt:  VVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

TrEMBL top hitse value%identityAlignment
A0A1S3BFK9 transcription termination factor MTEF1, chloroplastic4.4e-12478.26Show/hide
Query:  TCSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGR
        +C +F FP S A S   L+NP+F KP+   ++SLN QFSD SD+GLLFR+KILYLENHL+VD RKAFRENP+ RSA+L  LKSVE+CLSSMGLD SA+GR
Subjt:  TCSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGR

Query:  VLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGL
        VLDMYP+LLTS+PD  +YPIF+FLL+E QIPFP I KSIIRCPRILVSDLD QLRPALKFLRDLGFVG  AITCQTT+LLVS+VEHTLLPKI +LESLGL
Subjt:  VLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGL

Query:  SHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        SHEDVVNMVLRSPGLLTYS+QNNL+PKV+YFLGDMKGDLLELK FPQYFSF+LERKIKPRHR LVEHGLSLPLS+MLK+SDGEF A L EMR +S  AD
Subjt:  SHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

A0A5D3D1U5 Transcription termination factor MTEF14.4e-12478.26Show/hide
Query:  TCSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGR
        +C +F FP S A S   L+NP+F KP+   ++SLN QFSD SD+GLLFR+KILYLENHL+VD RKAFRENP+ RSA+L  LKSVE+CLSSMGLD SA+GR
Subjt:  TCSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGR

Query:  VLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGL
        VLDMYP+LLTS+PD  +YPIF+FLL+E QIPFP I KSIIRCPRILVSDLD QLRPALKFLRDLGFVG  AITCQTT+LLVS+VEHTLLPKI +LESLGL
Subjt:  VLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGL

Query:  SHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        SHEDVVNMVLRSPGLLTYS+QNNL+PKV+YFLGDMKGDLLELK FPQYFSF+LERKIKPRHR LVEHGLSLPLS+MLK+SDGEF A L EMR +S  AD
Subjt:  SHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

A0A6J1DAK3 transcription termination factor MTEF1, chloroplastic2.3e-12879.61Show/hide
Query:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFS------DNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDL
        C L  FP+SS PS     NPNF  P+   ++++N QFS       +SD+G+LFR+KILYLENHLHVD RKAF++NP+SRSATL ALKSVE+CLSSMGL+L
Subjt:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFS------DNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDL

Query:  SAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL
        SA+GRVLDMYPQLLTSDP+  LYPIF+FLL+E +IPFP IRKSIIRCPRILVSDLDLQLRP L FLR+LGFVG NAITCQTTMLLVSS+EHTLLPKI YL
Subjt:  SAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL

Query:  ESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQS
        ESLG SH+DVVNMVLRSPGLLTYS+QNNL+PKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSL LSRMLK+SDGEFTAR+IEMRLQS
Subjt:  ESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQS

Query:  STAD
        +TAD
Subjt:  STAD

A0A6J1G0M2 transcription termination factor MTEF1, chloroplastic8.6e-13685.19Show/hide
Query:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        +LF FP+SSAPS + LRNPNF KP+   +ISLN QFSD+SDAGLLFRQKILYLENHL+VDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRVL
Subjt:  SLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH
        DMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLSH
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSH

Query:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        +DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  EDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

A0A6J1HTW2 transcription termination factor MTEF1, chloroplastic1.9e-13584.23Show/hide
Query:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRV
        C+ F FP+SS PS + +RNPNF KP+   +ISLN QFSD+SDAGL FRQKILYLENHLHVDFRKAFRENP+SRSATL A+KSVE+CLSSMGL+LSA+GRV
Subjt:  CSLFPFPQSSAPS-SSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRV

Query:  LDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLS
        LDMYPQLLTSDPD  LYPIF+FLL+E QIPFP IRKSI+RCPR+LVSDLDLQLRPALKFLRDLGFVG NAIT QTT+LLVSSVEHTLLPKI YLE+LGLS
Subjt:  LDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLS

Query:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD
        H+DVVNMVLRSP LLTYS+QNNL+PKVDYFLGDMKGDL EL+RFPQYFSFSLERKIKPRHRLLVEHGLSL LS+MLK+SDGEFTARL+EMRLQSSTAD
Subjt:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTAD

SwissProt top hitse value%identityAlignment
F4IHL3 Transcription termination factor MTERF2, chloroplastic7.8e-1732.04Show/hide
Query:  MGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGSNAITCQTTMLLVS
        +G+    + R+L + P L   D +  + P   F L E  IP   I   +++ P +L + L  ++RP + FL        +D+G      +      LL  
Subjt:  MGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGSNAITCQTTMLLVS

Query:  SVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDG
        S+   L P + Y  SLG+    +  M+   P LL Y+V +NL PK  Y    M   L +L  FP++FS+SLER+I PRH ++VE+ ++  L  ML  +D 
Subjt:  SVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDG

Query:  EFTARL
        EF  R+
Subjt:  EFTARL

F4JVI3 Transcription termination factor MTERF5, chloroplastic1.6e-1730.73Show/hide
Query:  LKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF-VGSNAITCQTTML
        LK     L ++G+D +   +++  +P +LT      L    EF L +  +    I + + RCP I+   ++ +LRP +++ R L   V      C  T  
Subjt:  LKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGF-VGSNAITCQTTML

Query:  LVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKI
        L  S+E  L P   +    G   +++  M+ R   L T+S++ N++PK DYF   M     EL +FPQ+F +SL+ +IKPR+ L+   G+ L L+++L +
Subjt:  LVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKI

Query:  SDGEF
        S  EF
Subjt:  SDGEF

Q84X53 Transcription termination factor MTEF1, chloroplastic4.0e-8255.25Show/hide
Query:  CSLFPFPQSSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        CSLFP P  SA                  + +     + SD G+LFR+K++YL++ L+VD  KA R NP+ RSA + ++ SVE  LSS GL   A+GR+L
Subjt:  CSLFPFPQSSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL-ESLGLS
        DM+P LLTSDP+S + P+  FL +E  I    I KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI YL E LG +
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL-ESLGLS

Query:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSS
         E+V  MV+RSP LLTYSV NNL+PKV++F+ +M+GD+ ELKRFPQYFSFSLERKIKPRHRLL EHG+ +PLS MLK+SDG+F   L+E+RL+S+
Subjt:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSS

Q9FM80 Transcription termination factor MTERF9, chloroplastic1.4e-1828.44Show/hide
Query:  HVDFRKAFRENPNSRSATL-LALKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPAL
        H D ++     P     T+   LK+    L  +G+  S IG+++   P L +   ++ L P   +L+ E  I    + K +   P+ILV  LD+      
Subjt:  HVDFRKAFRENPNSRSATL-LALKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPAL

Query:  KFL-RDLGFVGSNAITC--QTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLER
         FL ++LG    + +    +   LL  S++   LP+I +L S+G+ + D++ ++     +L+ S+++NL PK  Y + ++  ++  L ++P Y S SL++
Subjt:  KFL-RDLGFVGSNAITC--QTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLER

Query:  KIKPRHRLLVE
        +I+PRHR LVE
Subjt:  KIKPRHRLLVE

Q9ZT96 Transcription termination factor MTERF4, chloroplastic4.1e-1026.32Show/hide
Query:  LSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGSNAITCQTTML
        L  +G+   A  R+++  P +L  + D  + P  + +L +  +    +   I + P I+  DL  +L    K L         DLG +       +    
Subjt:  LSSMGLDLSAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFL--------RDLGFVGSNAITCQTTML

Query:  LVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKI
         VS  E  +L  I +L   G S +    MV+  P +L  ++   +    +YF  +MK  L +L  FP +F++ LE  +KPRH+ +++ G+   L+ ML  
Subjt:  LVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKI

Query:  SDGEFTARL
        SD +F  R+
Subjt:  SDGEFTARL

Arabidopsis top hitse value%identityAlignment
AT2G03050.1 Mitochondrial transcription termination factor family protein2.9e-8355.25Show/hide
Query:  CSLFPFPQSSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL
        CSLFP P  SA                  + +     + SD G+LFR+K++YL++ L+VD  KA R NP+ RSA + ++ SVE  LSS GL   A+GR+L
Subjt:  CSLFPFPQSSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVL

Query:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL-ESLGLS
        DM+P LLTSDP+S + P+  FL +E  I    I KSI RCPR+L+S +D QLRPAL FL+ LGFVG + IT + T+LLVS+VE TL+PKI YL E LG +
Subjt:  DMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL-ESLGLS

Query:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSS
         E+V  MV+RSP LLTYSV NNL+PKV++F+ +M+GD+ ELKRFPQYFSFSLERKIKPRHRLL EHG+ +PLS MLK+SDG+F   L+E+RL+S+
Subjt:  HEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSS

AT2G34620.1 Mitochondrial transcription termination factor family protein7.4e-5543.25Show/hide
Query:  ITCSLFPFPQS-SAPSSSLRNPNFPKPKP---QISISLNPQFS-DNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDL
        ++ SL+  P+  S P  S     F   KP   + ++  +P F+  +    L  ++KIL LE  + +D  KA   NP   SA L +++SV   L S G+  
Subjt:  ITCSLFPFPQS-SAPSSSLRNPNFPKPKP---QISISLNPQFS-DNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDL

Query:  SAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL
        + + R+L M P++LTSD  + LYP+F FL ++  +P    R+ I +CPR+L+S ++ QL+PAL +L+ LG     A+  Q  +LLVSSVEHTL+PK+ +L
Subjt:  SAIGRVLDMYPQLLTSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYL

Query:  ESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF
        ES+G S  + + M+LR P L T+S++NN  PK+DYF+ ++KG L  LK FPQYF+FSLE++IKPRH   +E GL LPLS MLK +D EF
Subjt:  ESLGLSHEDVVNMVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF

AT2G36000.1 Mitochondrial transcription termination factor family protein7.7e-3634.66Show/hide
Query:  SSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSV--ELCLSSMGLDLSAIGRVLDMYPQL
        SS+ SS  ++P+ P      + +   +  ++S       +K++YL++ L +DF      +P   S  L A++SV   +    +   L    R++ M P+L
Subjt:  SSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSV--ELCLSSMGLDLSAIGRVLDMYPQL

Query:  LTSDPDSHLYPIFEFLLHEAQI-PFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVN
        LTS   SH  P+  FLL E  +     +R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL  SV++ L+P+I Y E LG S      
Subjt:  LTSDPDSHLYPIFEFLLHEAQI-PFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVN

Query:  MVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF
        M  R P L  YS+  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+  PL  MLK ++  F
Subjt:  MVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF

AT2G36000.2 Mitochondrial transcription termination factor family protein7.7e-3634.66Show/hide
Query:  SSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSV--ELCLSSMGLDLSAIGRVLDMYPQL
        SS+ SS  ++P+ P      + +   +  ++S       +K++YL++ L +DF      +P   S  L A++SV   +    +   L    R++ M P+L
Subjt:  SSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSV--ELCLSSMGLDLSAIGRVLDMYPQL

Query:  LTSDPDSHLYPIFEFLLHEAQI-PFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVN
        LTS   SH  P+  FLL E  +     +R+++ R PR+L   +D QLRP L FL+ +G +  +    + T LL  SV++ L+P+I Y E LG S      
Subjt:  LTSDPDSHLYPIFEFLLHEAQI-PFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVN

Query:  MVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF
        M  R P L  YS+  N  PK+ Y + +M  D+ E+  FPQYFSFSLE +IKPRH      G+  PL  MLK ++  F
Subjt:  MVLRSPGLLTYSVQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEF

AT3G18870.1 Mitochondrial transcription termination factor family protein9.7e-3134.09Show/hide
Query:  KPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPN--SRSATLLALKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPD-SHLYPIFEF
        +P  S S  P  S +S   L  + +  + EN  H+       +NP     +  L  + S    L S G+      R++ + PQL +   D S L P+F+F
Subjt:  KPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPN--SRSATLLALKSVELCLSSMGLDLSAIGRVLDMYPQLLTSDPD-SHLYPIFEF

Query:  LLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNN
        L  E        R  I+ CP IL SD++  LRP L +L++LG    N  +     +L + VE  L  K+ +L+S+G  HE+   +  R P +  YSV++N
Subjt:  LLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYSVQNN

Query:  LIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTAR
        L PK ++ + DM+ +L ELK+FPQYF+FSL ++I+PRH  L +  + + LSRML   D +F ++
Subjt:  LIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAACATGCAGTCTCTTCCCCTTTCCTCAGTCCTCAGCCCCATCATCATCTCTGAGAAACCCTAATTTCCCAAAACCTAAACCCCAAATCTCCATTTCCCTGAATCC
CCAATTCTCCGACAACTCCGACGCCGGCCTTCTTTTCCGGCAGAAAATTCTCTACCTCGAGAATCACCTCCATGTCGATTTCCGCAAAGCCTTCCGCGAAAACCCTAATT
CCCGCTCCGCCACTCTCCTCGCCCTCAAATCCGTCGAGCTCTGCCTCTCCTCCATGGGGCTCGACCTCTCTGCAATCGGCCGCGTCCTCGACATGTACCCTCAACTTCTC
ACCTCCGATCCCGACTCTCATCTTTACCCCATCTTCGAATTCCTCCTCCACGAAGCCCAGATCCCATTTCCCCACATTCGTAAATCCATCATTCGCTGCCCTAGAATCCT
CGTCTCCGATTTGGACCTTCAGTTGCGACCCGCGTTGAAGTTCCTGCGCGACCTAGGGTTCGTTGGGTCGAATGCCATCACCTGCCAGACTACAATGCTTCTGGTCTCGA
GTGTTGAGCATACGCTTCTGCCCAAGATTTGGTATCTCGAGAGCTTGGGGTTGTCGCACGAGGACGTGGTTAATATGGTGTTGAGGTCTCCGGGGTTGTTGACTTATAGT
GTCCAAAACAATTTGATTCCTAAAGTGGATTATTTCCTTGGAGATATGAAGGGTGATCTGTTGGAATTGAAAAGGTTTCCGCAGTATTTTTCGTTTAGTTTGGAGAGAAA
GATTAAGCCGCGGCATCGTTTGTTAGTTGAGCATGGATTGTCGCTTCCTTTGTCGAGAATGCTGAAGATTAGTGACGGAGAGTTCACTGCGAGGTTGATAGAAATGCGAT
TGCAGTCATCCACGGCTGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
AGAAAGTTGAGTTAAAAGAGAAATTGAGGTCCAAATTTGTCGTTCTTCCTCGACAGAAAAATGATAACATGCAGTCTCTTCCCCTTTCCTCAGTCCTCAGCCCCATCATC
ATCTCTGAGAAACCCTAATTTCCCAAAACCTAAACCCCAAATCTCCATTTCCCTGAATCCCCAATTCTCCGACAACTCCGACGCCGGCCTTCTTTTCCGGCAGAAAATTC
TCTACCTCGAGAATCACCTCCATGTCGATTTCCGCAAAGCCTTCCGCGAAAACCCTAATTCCCGCTCCGCCACTCTCCTCGCCCTCAAATCCGTCGAGCTCTGCCTCTCC
TCCATGGGGCTCGACCTCTCTGCAATCGGCCGCGTCCTCGACATGTACCCTCAACTTCTCACCTCCGATCCCGACTCTCATCTTTACCCCATCTTCGAATTCCTCCTCCA
CGAAGCCCAGATCCCATTTCCCCACATTCGTAAATCCATCATTCGCTGCCCTAGAATCCTCGTCTCCGATTTGGACCTTCAGTTGCGACCCGCGTTGAAGTTCCTGCGCG
ACCTAGGGTTCGTTGGGTCGAATGCCATCACCTGCCAGACTACAATGCTTCTGGTCTCGAGTGTTGAGCATACGCTTCTGCCCAAGATTTGGTATCTCGAGAGCTTGGGG
TTGTCGCACGAGGACGTGGTTAATATGGTGTTGAGGTCTCCGGGGTTGTTGACTTATAGTGTCCAAAACAATTTGATTCCTAAAGTGGATTATTTCCTTGGAGATATGAA
GGGTGATCTGTTGGAATTGAAAAGGTTTCCGCAGTATTTTTCGTTTAGTTTGGAGAGAAAGATTAAGCCGCGGCATCGTTTGTTAGTTGAGCATGGATTGTCGCTTCCTT
TGTCGAGAATGCTGAAGATTAGTGACGGAGAGTTCACTGCGAGGTTGATAGAAATGCGATTGCAGTCATCCACGGCTGATGCTTGAAGTGAGCTTCTACTTGCTTCTTTT
AATTTTTGTAGTCTCTTCGGATGTGATTATTTATGGAATTAGGGGATCTTGTAATGTGATGGCAGTTAGCATGAGGACTTTTTTTAGTGCAATATATAATGTTTACTAAT
TTTACCTTGGTTTCTCTCTATGACGCATGGTCTTGATTGATTTTTCGGCAG
Protein sequenceShow/hide protein sequence
MITCSLFPFPQSSAPSSSLRNPNFPKPKPQISISLNPQFSDNSDAGLLFRQKILYLENHLHVDFRKAFRENPNSRSATLLALKSVELCLSSMGLDLSAIGRVLDMYPQLL
TSDPDSHLYPIFEFLLHEAQIPFPHIRKSIIRCPRILVSDLDLQLRPALKFLRDLGFVGSNAITCQTTMLLVSSVEHTLLPKIWYLESLGLSHEDVVNMVLRSPGLLTYS
VQNNLIPKVDYFLGDMKGDLLELKRFPQYFSFSLERKIKPRHRLLVEHGLSLPLSRMLKISDGEFTARLIEMRLQSSTADA