; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014132 (gene) of Chayote v1 genome

Gene IDSed0014132
OrganismSechium edule (Chayote v1)
DescriptionRING/U-box superfamily protein
Genome locationLG10:37644128..37644832
RNA-Seq ExpressionSed0014132
SyntenySed0014132
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0032436 - positive regulation of proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0000151 - ubiquitin ligase complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0031624 - ubiquitin conjugating enzyme binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR002867 - IBR domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR031127 - E3 ubiquitin ligase RBR family
IPR044066 - TRIAD supradomain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039247.1 putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa]1.7e-6959.28Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF
        TTC ICTD K   +MF +  C  SHSFC  CIS HI AKLED NIANVKCP+  C A L P +    C  F+PK   DRWGD LCEA ILG  +L +CPF
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF

Query:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        +DCSV +I+DGDE  +EAEC  C RMFCA+C V WH  + CEEFQ +   +E  ++DL+AM +LAE++ WKRCPHC+ YV  I GC ++ CRCG++FCYS
Subjt:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHACPDSAYARRYH
        CGAKWGG HACP+SA AR+YH
Subjt:  CGAKWGGNHACPDSAYARRYH

KAE8649011.1 hypothetical protein Csa_009107 [Cucumis sativus]1.3e-6959.63Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF
        T C ICTD K   +MF +  C  SHSFC  CIS+HI AKLED NIANVKCP+PGC+A     L P  C  F+PK  +DRWG  LCEA ILG  +L +CPF
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF

Query:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        +DCSV +I+DGDE  +EAEC  C RMFCA+C V WHG + CEEFQ +   +EKE++D +   +LAE++ WKRCPHC+TYV  I GC +I CRC ++FCYS
Subjt:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHACPDSAYAR
        CGAKWGG+HACP+SA AR
Subjt:  CGAKWGGNHACPDSAYAR

XP_004141646.1 probable E3 ubiquitin-protein ligase ARI3 [Cucumis sativus]1.8e-7159.73Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF
        T C ICTD K   +MF +  C  SHSFC  CIS+HI AKLED NIANVKCP+PGC+A     L P  C  F+PK  +DRWG  LCEA ILG  +L +CPF
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF

Query:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        +DCSV +I+DGDE  +EAEC  C RMFCA+C V WHG + CEEFQ +   +EKE++D +   +LAE++ WKRCPHC+TYV  I GC +I CRC ++FCYS
Subjt:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHACPDSAYARRYH
        CGAKWGG+HACP+SA AR+YH
Subjt:  CGAKWGGNHACPDSAYARRYH

XP_022956145.1 probable E3 ubiquitin-protein ligase ARI10 [Cucurbita moschata]1.3e-6154.84Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV
        T C ICTDTK+ ++MF S+ C  SH+FC  CIS HI AKLED     VKCPEP C A L+P +    C  F+PKE ++RWGDAL +A +L  + ++CPF 
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV

Query:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC
        DCS  M+++ D  +   EC  C RMFCA+C VGWHGDM+C EFQR   +   ++E+ M M +LA+E+KWKRCPHC+  V +I GC  I CRCGS+FCY C
Subjt:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC

Query:  GAKWGGNHACPDSAYAR
        GAKW G+HACP SAY R
Subjt:  GAKWGGNHACPDSAYAR

XP_038889081.1 probable E3 ubiquitin-protein ligase RNF144A-A [Benincasa hispida]4.1e-6354.42Show/hide
Query:  NKELAKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAIL
        N   + K   + C ICTD K  ++MF +  C  SH+FCT CIS +I AKLED     VKCP+P C   L+P +    C  F+PKE ++RWGDAL EA IL
Subjt:  NKELAKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAIL

Query:  GVQKLFCPFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIK
          ++L CPF DCS  MI +GDE  V   EC++C R+FCAQC+VGWHGDM C EF++ R   ++  ED+M M +LA+EKKWK+CP+C+ YV +  GC  I 
Subjt:  GVQKLFCPFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIK

Query:  CRCGSQFCYSCGAKWGGNHACPDSAY
        CRCG+QFCYSCGAKWGG HACP+SAY
Subjt:  CRCGSQFCYSCGAKWGGNHACPDSAY

TrEMBL top hitse value%identityAlignment
A0A0A0KSV5 Uncharacterized protein8.9e-7259.73Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF
        T C ICTD K   +MF +  C  SHSFC  CIS+HI AKLED NIANVKCP+PGC+A     L P  C  F+PK  +DRWG  LCEA ILG  +L +CPF
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF

Query:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        +DCSV +I+DGDE  +EAEC  C RMFCA+C V WHG + CEEFQ +   +EKE++D +   +LAE++ WKRCPHC+TYV  I GC +I CRC ++FCYS
Subjt:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHACPDSAYARRYH
        CGAKWGG+HACP+SA AR+YH
Subjt:  CGAKWGGNHACPDSAYARRYH

A0A1S3CDI0 E3 ubiquitin-protein ligase RNF144B-like1.6e-6053.54Show/hide
Query:  TVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFC
        T    C ICTD K+ + MF +  C  +H+FCT CIS HI AKLE      VKCPEP C   L+P +    C  F+PK  ++RW DAL EA IL  ++L C
Subjt:  TVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFC

Query:  PFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDD--EKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGS
        PF DC   MI++GDE  V   EC SC R+FCA+CRVGWHG+M C EFQR R +     +K+D M + +LAE KKW+RCPHC+ YV +  GC  I CRCGS
Subjt:  PFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDD--EKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGS

Query:  QFCYSCGAKWGGNHACPDSAYARRYH
        +FCYSCG KWGG HAC  SAY R  H
Subjt:  QFCYSCGAKWGGNHACPDSAYARRYH

A0A5A7TCD1 Putative E3 ubiquitin-protein ligase RNF217 isoform X28.3e-7059.28Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF
        TTC ICTD K   +MF +  C  SHSFC  CIS HI AKLED NIANVKCP+  C A L P +    C  F+PK   DRWGD LCEA ILG  +L +CPF
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPF

Query:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        +DCSV +I+DGDE  +EAEC  C RMFCA+C V WH  + CEEFQ +   +E  ++DL+AM +LAE++ WKRCPHC+ YV  I GC ++ CRCG++FCYS
Subjt:  VDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHACPDSAYARRYH
        CGAKWGG HACP+SA AR+YH
Subjt:  CGAKWGGNHACPDSAYARRYH

A0A5A7UED3 E3 ubiquitin-protein ligase RNF144B-like protein1.6e-6053.54Show/hide
Query:  TVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFC
        T    C ICTD K+ + MF +  C  +H+FCT CIS HI AKLE      VKCPEP C   L+P +    C  F+PK  ++RW DAL EA IL  ++L C
Subjt:  TVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFC

Query:  PFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDD--EKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGS
        PF DC   MI++GDE  V   EC SC R+FCA+CRVGWHG+M C EFQR R +     +K+D M + +LAE KKW+RCPHC+ YV +  GC  I CRCGS
Subjt:  PFVDCSVTMIEDGDEV-VREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDD--EKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGS

Query:  QFCYSCGAKWGGNHACPDSAYARRYH
        +FCYSCG KWGG HAC  SAY R  H
Subjt:  QFCYSCGAKWGGNHACPDSAYARRYH

A0A6J1GX07 probable E3 ubiquitin-protein ligase ARI106.4e-6254.84Show/hide
Query:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV
        T C ICTDTK+ ++MF S+ C  SH+FC  CIS HI AKLED     VKCPEP C A L+P +    C  F+PKE ++RWGDAL +A +L  + ++CPF 
Subjt:  TTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV

Query:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC
        DCS  M+++ D  +   EC  C RMFCA+C VGWHGDM+C EFQR   +   ++E+ M M +LA+E+KWKRCPHC+  V +I GC  I CRCGS+FCY C
Subjt:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC

Query:  GAKWGGNHACPDSAYAR
        GAKW G+HACP SAY R
Subjt:  GAKWGGNHACPDSAYAR

SwissProt top hitse value%identityAlignment
F4KGU4 ATP-dependent RNA helicase DEAH12, chloroplastic2.6e-1226.11Show/hide
Query:  SHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGV--QKLFCPFVDC-SVTMIEDGDEVVREAECM
        SH FC  C+    +A + + +   + C    C A +  A         L +E +D    A   + +     +  FC   DC SV  +    E      C 
Subjt:  SHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGV--QKLFCPFVDC-SVTMIEDGDEVVREAECM

Query:  SCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC
        +C    C +C + +H  ++CE +++      KE  DL ++ + A+ K  K CP C++ + +  GC  +KCRCG   C++C
Subjt:  SCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSC

Q949V6 Probable E3 ubiquitin-protein ligase ARI11.3e-1126.19Show/hide
Query:  TCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPFV
        +C +C +   P D      C   H FC  C + H   ++ +     ++C    C+A  D  +  S  +   P +   ++   L E+ I   + + +CP  
Subjt:  TCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKL-FCPFV

Query:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSC--EEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCY
              I   D+ + E EC SC   FC  C    H   SC   E  R++  DE E  + + ++        K CP C   V +  GC  ++C CG  FC+
Subjt:  DCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSC--EEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCY

Query:  SCGAKWGGNH
         CG   G +H
Subjt:  SCGAKWGGNH

Q9US46 E3 ubiquitin-protein ligase itt11.4e-1024.79Show/hide
Query:  CMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK-LFCPFVD
        C +C D     D F+ + C H    C +C+  +    +++   + +KC +  C     P L        +  +  +R+ +   +         +FCP   
Subjt:  CMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK-LFCPFVD

Query:  CSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMS-CEEFQRRRGDDEKEKEDLMAMNELAEEK---------------------------KW----
        C      D  +  + A C  C   FC+ C+  WHGD+S C    +  GD +K  E  +   E   EK                           KW    
Subjt:  CSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMS-CEEFQRRRGDDEKEKEDLMAMNELAEEK---------------------------KW----

Query:  -KRCPHCQTYVSRISGCEWIKCRCGSQFCYSCGA
         +RCP C   V RI GC  + C CG+ FC+ CGA
Subjt:  -KRCPHCQTYVSRISGCEWIKCRCGSQFCYSCGA

Arabidopsis top hitse value%identityAlignment
AT3G14250.1 RING/U-box superfamily protein2.0e-5243.13Show/hide
Query:  CMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFVDC
        CMIC D K  +D+FR +T + +H++CT C   ++  K+++ N + +KCP+  C       ++P TC   +PK+  DRW   LCE+ I    K +CPF DC
Subjt:  CMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFVDC

Query:  SVTMI--EDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEK-EDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS
        S  M+  E+GD  V + EC SC R+FC QC+V WH  + C+EFQR     +K   ED   + ++A+ K+W+RCP C+ YV ++ GC+ IKCRCG QFCY 
Subjt:  SVTMI--EDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEK-EDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYS

Query:  CGAKWGGNHAC
        CG+ W  +HAC
Subjt:  CGAKWGGNHAC

AT3G45470.1 IBR domain containing protein4.3e-2629.49Show/hide
Query:  TCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGC-DAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV
        TC+IC +      MF    C H H  C  C++  ++ KL +  +       P C D      L    C   L  + ++ W   + E +I   ++++CP++
Subjt:  TCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGC-DAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFCPFV

Query:  DCSVTMIEDGDEVVR-----EAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQ
        +CS  M +   E+ R     +  C+ C  + C  C+V WH D+SC E+++   D      D + +  LA ++KW++C  C+  +    GC  + CRCG Q
Subjt:  DCSVTMIEDGDEVVR-----EAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQ

Query:  FCYSCGAKW-GGNHACP
        FCY CG +W  G   CP
Subjt:  FCYSCGAKW-GGNHACP

AT3G53690.1 RING/U-box superfamily protein5.6e-5042.79Show/hide
Query:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK
        + KT    C IC D+K+  + FR   C  SH +C  C+S +I AKL+D NI +++CP  GC       L+P  C   LPKE  DRWGDALCEA ++  +K
Subjt:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK

Query:  LFCPFVDCS-VTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCG
         +CP+ DCS +  +E+ +  ++++EC  C RM C +C   WH +M+CEEFQ+    +E+ ++D++ +  +A++KKWKRCP C+ Y+ +  GC ++KCRCG
Subjt:  LFCPFVDCS-VTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCG

Query:  SQFCYSCG
          FCY+CG
Subjt:  SQFCYSCG

AT5G37560.1 RING/U-box superfamily protein1.7e-3032.73Show/hide
Query:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK
        A +  P TC IC+D      M  +  C H H  C +C+   +K KL    +    C E GC +     L   +C+  L  + ++ W   + E  I   +K
Subjt:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK

Query:  LFCPFVDCSVTMIEDGDEVVREAE------CMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWI
        ++CP+  CS+ M +   E+ REAE      C+ C  +FC  C+V WH D+SC +++R     E+   D+M +  LA ++ W++C  C+  +    GC  I
Subjt:  LFCPFVDCSVTMIEDGDEVVREAE------CMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWI

Query:  KCRCGSQFCYSCGAKWGGNH
         CRCG +FCY CG KW   H
Subjt:  KCRCGSQFCYSCGAKWGGNH

AT5G60250.1 zinc finger (C3HC4-type RING finger) family protein2.1e-2832.13Show/hide
Query:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK
        AK  +   C IC +      MF    C   H FC  C+  H++ KL  H +A  KCP  GC + L   +D   C   L  +    W   L E AI   ++
Subjt:  AKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQK

Query:  LFCPFVDCSV----TMIEDGDEVVRE-------AECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRIS
        ++CP+  CS     T I +  + +           C+ CR +FC  C+V WHG++SC E+++      +   D + +  LA  K W++C  CQ  +    
Subjt:  LFCPFVDCSV----TMIEDGDEVVRE-------AECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRIS

Query:  GCEWIKCRCGSQFCYSCGAKW
        GC  I CRCG +FCY+CG  W
Subjt:  GCEWIKCRCGSQFCYSCGAKW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATAACAAGGAATTAGCAAAGAAGACTGTTCCAACCACGTGCATGATCTGTACGGACACCAAAACCCCGGCCGACATGTTCCGAAGCAGCACGTGCTCCCATTC
CCATTCCTTCTGCACCACCTGCATCTCTCACCACATCAAAGCCAAACTTGAAGACCACAACATAGCCAACGTCAAGTGCCCCGAGCCAGGCTGCGACGCAGCGTTGGACC
CAGCGTTGGACCCCAGCACGTGCGCTCCCTTCCTCCCCAAGGAAACGATGGATCGCTGGGGGGACGCCTTGTGCGAGGCTGCCATCCTCGGGGTGCAGAAGCTCTTCTGT
CCCTTCGTGGACTGCTCGGTCACGATGATCGAGGACGGGGACGAGGTGGTGAGGGAGGCTGAGTGCATGAGCTGTAGGAGAATGTTCTGCGCGCAGTGTAGGGTGGGGTG
GCACGGGGACATGTCGTGCGAGGAGTTCCAGAGGCGGCGTGGGGACGACGAGAAAGAGAAGGAGGACTTGATGGCGATGAATGAGTTGGCGGAGGAGAAGAAGTGGAAGA
GATGTCCGCATTGCCAGACGTATGTTTCGAGGATTTCGGGTTGCGAATGGATCAAGTGTAGGTGTGGATCTCAGTTTTGTTATAGCTGTGGAGCTAAGTGGGGGGGTAAC
CATGCCTGCCCAGATTCTGCATATGCTCGTCGGTACCATCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATAACAAGGAATTAGCAAAGAAGACTGTTCCAACCACGTGCATGATCTGTACGGACACCAAAACCCCGGCCGACATGTTCCGAAGCAGCACGTGCTCCCATTC
CCATTCCTTCTGCACCACCTGCATCTCTCACCACATCAAAGCCAAACTTGAAGACCACAACATAGCCAACGTCAAGTGCCCCGAGCCAGGCTGCGACGCAGCGTTGGACC
CAGCGTTGGACCCCAGCACGTGCGCTCCCTTCCTCCCCAAGGAAACGATGGATCGCTGGGGGGACGCCTTGTGCGAGGCTGCCATCCTCGGGGTGCAGAAGCTCTTCTGT
CCCTTCGTGGACTGCTCGGTCACGATGATCGAGGACGGGGACGAGGTGGTGAGGGAGGCTGAGTGCATGAGCTGTAGGAGAATGTTCTGCGCGCAGTGTAGGGTGGGGTG
GCACGGGGACATGTCGTGCGAGGAGTTCCAGAGGCGGCGTGGGGACGACGAGAAAGAGAAGGAGGACTTGATGGCGATGAATGAGTTGGCGGAGGAGAAGAAGTGGAAGA
GATGTCCGCATTGCCAGACGTATGTTTCGAGGATTTCGGGTTGCGAATGGATCAAGTGTAGGTGTGGATCTCAGTTTTGTTATAGCTGTGGAGCTAAGTGGGGGGGTAAC
CATGCCTGCCCAGATTCTGCATATGCTCGTCGGTACCATCATTAA
Protein sequenceShow/hide protein sequence
MADNKELAKKTVPTTCMICTDTKTPADMFRSSTCSHSHSFCTTCISHHIKAKLEDHNIANVKCPEPGCDAALDPALDPSTCAPFLPKETMDRWGDALCEAAILGVQKLFC
PFVDCSVTMIEDGDEVVREAECMSCRRMFCAQCRVGWHGDMSCEEFQRRRGDDEKEKEDLMAMNELAEEKKWKRCPHCQTYVSRISGCEWIKCRCGSQFCYSCGAKWGGN
HACPDSAYARRYHH