; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014136 (gene) of Chayote v1 genome

Gene IDSed0014136
OrganismSechium edule (Chayote v1)
Descriptiontranscription factor BEE 3-like
Genome locationLG03:7291405..7294496
RNA-Seq ExpressionSed0014136
SyntenySed0014136
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR024097 - Basic helix-loop-helix leucine zipper transcription factor
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022939188.1 transcription factor BEE 3-like [Cucurbita moschata]5.6e-4969.7Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV-PA--------PLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV PA        P YSS P  + + SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV-PA--------PLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        VIHVRAKRGQATD+HSLAER RREK+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

XP_022994041.1 transcription factor BEE 3-like isoform X1 [Cucurbita maxima]2.1e-4869.7Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV         AP  YSS P F  E SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        VIHVRAKRGQATD+HSLAER RR+K+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

XP_022994043.1 transcription factor BEE 3-like isoform X2 [Cucurbita maxima]4.3e-4966.29Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV         AP  YSS P F  E SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKL
        VIHVRAKRGQATD+HSLAER RR+K+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE + +   + L
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKL

XP_038886374.1 transcription factor BEE 3-like isoform X1 [Benincasa hispida]2.4e-5274.03Show/hide
Query:  SNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQA
        ++LEM SNHFT+ESSN++DQ+  I   NPFFT+SFCFEKF HFNEI SCV  PLYSS P F   D KSLGGRK K +NE  RD +  KEVIHVRAKRGQA
Subjt:  SNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQA

Query:  TDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        TD+HSLAER RREK+NQRL+FLQ+LVPGCYKTMGMAVM DVIINYI SL NQIE
Subjt:  TDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

XP_038886375.1 transcription factor BEE 3-like isoform X2 [Benincasa hispida]2.4e-5274.03Show/hide
Query:  SNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQA
        ++LEM SNHFT+ESSN++DQ+  I   NPFFT+SFCFEKF HFNEI SCV  PLYSS P F   D KSLGGRK K +NE  RD +  KEVIHVRAKRGQA
Subjt:  SNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQA

Query:  TDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        TD+HSLAER RREK+NQRL+FLQ+LVPGCYKTMGMAVM DVIINYI SL NQIE
Subjt:  TDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

TrEMBL top hitse value%identityAlignment
A0A2N9FPY7 BHLH domain-containing protein3.8e-2746.28Show/hide
Query:  MRSNLEMKSNHFTLESSNESDQRITISNFN--------------------PFFTDSFCFEKFGHFNEISSCVPAPLYSSLPL-FYPEDSKSLGGRKGKMK
        M SNLE+ +N   LE+ N +DQ  T+ + N                    P    S   + FGH  +  + +P    ++     + E+ KSL GRK +  
Subjt:  MRSNLEMKSNHFTLESSNESDQRITISNFN--------------------PFFTDSFCFEKFGHFNEISSCVPAPLYSSLPL-FYPEDSKSLGGRKGKMK

Query:  NEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKLN
        N+   D +  KEVIHVRAKRGQATD+HSL ER RREK+N+RL+FLQ+LVPGCYK MGMA MLDVIINYI+SL+NQIE    F+ +KL+
Subjt:  NEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKLN

A0A6J1CEL5 transcription factor BEE 3-like2.1e-4165.64Show/hide
Query:  MRSNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPL-------YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVI
        M  N EM S  FT ESSN SD + TIS  NPFFT+ FC     HFNEI S VP  L        SS P    +DSKSLGG K K ++E  RD + Q+EVI
Subjt:  MRSNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPL-------YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVI

Query:  HVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        HVRAKRGQATD+HSLAER RREK+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE
Subjt:  HVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

A0A6J1FKZ5 transcription factor BEE 3-like2.7e-4969.7Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV-PA--------PLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV PA        P YSS P  + + SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV-PA--------PLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        VIHVRAKRGQATD+HSLAER RREK+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

A0A6J1JY10 transcription factor BEE 3-like isoform X11.0e-4869.7Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV         AP  YSS P F  E SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        VIHVRAKRGQATD+HSLAER RR+K+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

A0A6J1K416 transcription factor BEE 3-like isoform X22.1e-4966.29Show/hide
Query:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE
        ++LEM SNHFT+ESSNESD  Q   +S+ NPFFTD+FCFEKF HFNEI SCV         AP  YSS P F  E SKS GGRK K +NE  RD +  K 
Subjt:  SNLEMKSNHFTLESSNESD--QRITISNFNPFFTDSFCFEKFGHFNEISSCV--------PAPL-YSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKE

Query:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKL
        VIHVRAKRGQATD+HSLAER RR+K+NQRL+FLQ+LVPGCYKTMGMAVMLDVIINYI SL NQIE + +   + L
Subjt:  VIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKL

SwissProt top hitse value%identityAlignment
A4D998 Transcription factor bHLH751.7e-2465.59Show/hide
Query:  EDSKSLGGRKGKMKNEEIRDGKMQ--KEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        E+S S   RK   + E +   + Q  K+V+HVRAKRGQATD+HSLAER RREK+N+RLK LQ+LVPGCYK MGMAVMLDVII+Y+ SL NQIE
Subjt:  EDSKSLGGRKGKMKNEEIRDGKMQ--KEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

Q8GWK7 Transcription factor BEE 31.9e-2360.67Show/hide
Query:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        +K+   R+GK      R+ + ++EV+HVRA+RGQATD+HS+AER RR K+N+RLK LQ++VPGCYKTMGMA MLD IINY+ SL NQ+E
Subjt:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

Q8GZ13 Transcription factor BEE 19.3e-2361.9Show/hide
Query:  RKGK-MKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        R+GK +K ++  + + ++EV+HVRA+RGQATD+HSLAER RR K+N+RL+ LQ++VPGCYK MGMA MLD IINY+ SL NQ+E
Subjt:  RKGK-MKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

Q9CAA9 Transcription factor bHLH493.3e-2055.43Show/hide
Query:  PEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        P    + G ++GK  ++  +DG      IHVRA+RGQAT++HSLAER RREK+++R+KFLQ+LVPGC K  G AVMLD IINY+ SL  Q+E
Subjt:  PEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

Q9SRT2 Transcription factor bHLH624.3e-2047.41Show/hide
Query:  PAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLH
        P+ + SS  +   EDS     +K +   ++ +     K+ IHVRA+RGQATD+HSLAER RREK+++R+K LQ+LVPGC K  G A+MLD IINY+ SL 
Subjt:  PAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLH

Query:  NQIETKNIFILKKLNN
         Q+E    F+  KL++
Subjt:  NQIETKNIFILKKLNN

Arabidopsis top hitse value%identityAlignment
AT1G18400.1 BR enhanced expression 16.6e-2461.9Show/hide
Query:  RKGK-MKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        R+GK +K ++  + + ++EV+HVRA+RGQATD+HSLAER RR K+N+RL+ LQ++VPGCYK MGMA MLD IINY+ SL NQ+E
Subjt:  RKGK-MKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

AT1G25330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.2e-2565.59Show/hide
Query:  EDSKSLGGRKGKMKNEEIRDGKMQ--KEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        E+S S   RK   + E +   + Q  K+V+HVRAKRGQATD+HSLAER RREK+N+RLK LQ+LVPGCYK MGMAVMLDVII+Y+ SL NQIE
Subjt:  EDSKSLGGRKGKMKNEEIRDGKMQ--KEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

AT1G68920.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.3e-2155.43Show/hide
Query:  PEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        P    + G ++GK  ++  +DG      IHVRA+RGQAT++HSLAER RREK+++R+KFLQ+LVPGC K  G AVMLD IINY+ SL  Q+E
Subjt:  PEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

AT1G73830.1 BR enhanced expression 31.3e-2460.67Show/hide
Query:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        +K+   R+GK      R+ + ++EV+HVRA+RGQATD+HS+AER RR K+N+RLK LQ++VPGCYKTMGMA MLD IINY+ SL NQ+E
Subjt:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE

AT1G73830.2 BR enhanced expression 31.3e-2460.67Show/hide
Query:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE
        +K+   R+GK      R+ + ++EV+HVRA+RGQATD+HS+AER RR K+N+RLK LQ++VPGCYKTMGMA MLD IINY+ SL NQ+E
Subjt:  SKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAERARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCAATTTAGAGATGAAAAGCAACCATTTTACATTGGAGAGCTCCAATGAAAGTGATCAAAGAATTACAATCTCCAATTTCAATCCTTTTTTTACTGACAGCTT
TTGTTTTGAAAAGTTTGGTCACTTTAATGAAATTTCAAGCTGTGTTCCAGCTCCTCTTTACTCCTCACTGCCTCTATTTTACCCAGAAGATTCCAAGAGCTTGGGAGGAA
GGAAGGGGAAAATGAAAAATGAAGAAATTAGGGATGGGAAGATGCAAAAGGAAGTCATTCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATACCCACAGCTTAGCAGAA
AGAGCAAGAAGAGAGAAAGTAAATCAGAGGTTGAAATTCTTACAGGAATTGGTTCCAGGATGCTACAAGACAATGGGTATGGCAGTTATGTTGGATGTGATTATAAATTA
CATTCATTCTCTTCACAATCAGATAGAGACTAAAAATATATTTATTCTAAAAAAACTAAATAATTATCGAATCCAACCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCAATTTAGAGATGAAAAGCAACCATTTTACATTGGAGAGCTCCAATGAAAGTGATCAAAGAATTACAATCTCCAATTTCAATCCTTTTTTTACTGACAGCTT
TTGTTTTGAAAAGTTTGGTCACTTTAATGAAATTTCAAGCTGTGTTCCAGCTCCTCTTTACTCCTCACTGCCTCTATTTTACCCAGAAGATTCCAAGAGCTTGGGAGGAA
GGAAGGGGAAAATGAAAAATGAAGAAATTAGGGATGGGAAGATGCAAAAGGAAGTCATTCATGTGAGGGCAAAAAGAGGCCAAGCTACTGATACCCACAGCTTAGCAGAA
AGAGCAAGAAGAGAGAAAGTAAATCAGAGGTTGAAATTCTTACAGGAATTGGTTCCAGGATGCTACAAGACAATGGGTATGGCAGTTATGTTGGATGTGATTATAAATTA
CATTCATTCTCTTCACAATCAGATAGAGACTAAAAATATATTTATTCTAAAAAAACTAAATAATTATCGAATCCAACCTTAA
Protein sequenceShow/hide protein sequence
MRSNLEMKSNHFTLESSNESDQRITISNFNPFFTDSFCFEKFGHFNEISSCVPAPLYSSLPLFYPEDSKSLGGRKGKMKNEEIRDGKMQKEVIHVRAKRGQATDTHSLAE
RARREKVNQRLKFLQELVPGCYKTMGMAVMLDVIINYIHSLHNQIETKNIFILKKLNNYRIQP