; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014157 (gene) of Chayote v1 genome

Gene IDSed0014157
OrganismSechium edule (Chayote v1)
DescriptionD-ribose-binding periplasmic protein
Genome locationLG01:12180594..12182377
RNA-Seq ExpressionSed0014157
SyntenySed0014157
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584235.1 hypothetical protein SDJN03_20167, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5976.33Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRH-DGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVT
        MGNCQA+DTASL+IQHP GKVDR YWPVNAGEIMKSNPGHYVALLISTK+C S++TA   RR +    N +N NSVRLTRIKLLKPTDSLVLGQIYRLVT
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRH-DGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVT

Query:  TQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES
         QDVLQGLK+KQEAK+K+NS D + K GN E GSE ++NQG+K EKNR VSSA +SRGWQPSLQSISE+
Subjt:  TQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES

XP_004152463.1 uncharacterized protein LOC101220404 [Cucumis sativus]5.1e-6376.57Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDRLYWPVNAGEIMK+NPGHYVALLISTK+C SETT+THHRRR +D   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE
        TTQDVLQGLK+KQEAK K+N  + + K GNSE GSE +INQG+K E+NR       VS+A +SRGWQPSLQSISE
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE

XP_008438114.1 PREDICTED: uncharacterized protein LOC103483316 [Cucumis melo]5.1e-6376.57Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDRLYWPVNAGEIMK+NPGHYVALLISTK+C SETT+THHRRR ++   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE
        TTQDVLQGLK+KQEAK K+N  D + K GNSE GSE +INQG+K E+NR       VS+A +SRGWQPSLQSISE
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE

XP_022923864.1 uncharacterized protein LOC111431455 [Cucurbita moschata]4.0e-6077.65Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDR YWPVNAGEIMKSNPGHYVALLISTK+C S++TA   RRR HD   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES
        T QDVLQGLK+KQEAK+K+NS D + K GN E GSE ++NQG+K EKNR VSSA +SRGWQPSLQSISE+
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES

XP_023519579.1 uncharacterized protein LOC111782953 [Cucurbita pepo subsp. pepo]5.2e-6077.65Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDR YWPVNAGEIMKSNPGHYVALLISTK+C S++TA   RRR HD   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES
        T QDVLQGLK+KQEAK+K+NS D + K GN E GSE ++NQG+K EKNR VSSA +SRGWQPSLQSISE+
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES

TrEMBL top hitse value%identityAlignment
A0A0A0LU27 Uncharacterized protein2.4e-6376.57Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDRLYWPVNAGEIMK+NPGHYVALLISTK+C SETT+THHRRR +D   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE
        TTQDVLQGLK+KQEAK K+N  + + K GNSE GSE +INQG+K E+NR       VS+A +SRGWQPSLQSISE
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE

A0A1S3AV95 uncharacterized protein LOC1034833162.4e-6376.57Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDRLYWPVNAGEIMK+NPGHYVALLISTK+C SETT+THHRRR ++   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE
        TTQDVLQGLK+KQEAK K+N  D + K GNSE GSE +INQG+K E+NR       VS+A +SRGWQPSLQSISE
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE

A0A5D3BH89 Uncharacterized protein2.4e-6376.57Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDRLYWPVNAGEIMK+NPGHYVALLISTK+C SETT+THHRRR ++   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE
        TTQDVLQGLK+KQEAK K+N  D + K GNSE GSE +INQG+K E+NR       VS+A +SRGWQPSLQSISE
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-------VSSAGRSRGWQPSLQSISE

A0A6J1E7K0 uncharacterized protein LOC1114314551.9e-6077.65Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQA+DTASL+IQHP GKVDR YWPVNAGEIMKSNPGHYVALLISTK+C S++TA   RRR HD   N +N NSVRLTRIKLLKPTDSLVLGQIYRLV
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHD--GNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES
        T QDVLQGLK+KQEAK+K+NS D + K GN E GSE ++NQG+K EKNR VSSA +SRGWQPSLQSISE+
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES

A0A6J1KF34 uncharacterized protein LOC1114952317.4e-6076.33Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRH-DGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVT
        MGNCQA+DTASL+IQHP GKVDR YWPVNAGEIMKSNPGHYVALLISTK+C S++TA   RR +    N +N NSVRLTRIKLLKPTDSLVLGQIYRLVT
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRH-DGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVT

Query:  TQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES
         QDVLQGLK+KQEAK+K+NS D + K GN E GSE ++NQG+K EKNR VSSA +SRGWQPSLQSISE+
Subjt:  TQDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNR-VSSAGRSRGWQPSLQSISES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10530.1 unknown protein3.4e-2541.04Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT
        MGNCQAV+ A LV+QHP G +DR Y  V+  E+M   PGHYV+L+I      SE    +        ++    +VR TR++LL+PT++LVLG  YRL+T+
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT

Query:  QDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNRV----SSAGRSRGWQPSLQSISESIS
        Q+V++ L+ K+ AK KK+     EKT  ++  S++ + +  + ++ RV    +S  +S+ W+PSLQSISE+ S
Subjt:  QDVLQGLKSKQEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNRV----SSAGRSRGWQPSLQSISESIS

AT1G60010.1 unknown protein1.7e-3245.86Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLI--STKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV
        MGNCQAVD A+LV+QHP GK+DR Y PV+  EIM+  PGHYV+L+I    K   + TT T         ++S    VR TR+KLL+PT++LVLG  YRL+
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLI--STKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLV

Query:  TTQDVLQGLKSKQEAKLKKNSSDSDEK----TGNSEMGSEEDINQGI--KKEKNRV----SSAGRSRGWQPSLQSISESIS
        T+Q+V++ L++K+ AK KK+ S++ ++    +   ++  E D NQ +  K EK R     S++ RS+ W+PSLQSISE+ S
Subjt:  TTQDVLQGLKSKQEAKLKKNSSDSDEK----TGNSEMGSEEDINQGI--KKEKNRV----SSAGRSRGWQPSLQSISESIS

AT5G50090.1 unknown protein2.4e-3452.63Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT
        MGNCQAVDTA +VIQHP GK ++L  PV+A  +MK NPGH V+LLIST   SS ++        H G       +RLTRIKLL+PTD+LVLG +YRL+TT
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT

Query:  QDVLQGLKSKQEAKLKKNSSDSDEKTG-----NSEMGSEEDINQGIKKEKNRVSSAGRSRGWQPSLQSISE
        ++V++GL +K+ +KLKK S  SD+K       NS     ED  Q  K+EK R   +  SR WQPSLQSISE
Subjt:  QDVLQGLKSKQEAKLKKNSSDSDEKTG-----NSEMGSEEDINQGIKKEKNRVSSAGRSRGWQPSLQSISE

AT5G50090.2 unknown protein2.4e-3451.5Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT
        MGNCQAVDTA +VIQHP GK ++L  PV+A  +MK NPGH V+LLIST   SS ++        H G       +RLTRIKLL+PTD+LVLG +YRL+TT
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT

Query:  QDVLQGLKSKQEAKLKKNSSDSDEKTGN-SEMGSEEDINQGIKKEKNRVSSAGRSRGWQPSLQSISE
        ++V++GL +K+ +KLKK S  SD+K      + S +  N+  +KE++R+     SR WQPSLQSISE
Subjt:  QDVLQGLKSKQEAKLKKNSSDSDEKTGN-SEMGSEEDINQGIKKEKNRVSSAGRSRGWQPSLQSISE

AT5G62900.1 unknown protein1.3e-2742.22Show/hide
Query:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT
        MGNCQA + A+ VIQ P GK  R Y  VNA E++KS+PGH+VALL+S+ +              H G      S+R+TRIKLL+P+D+L+LG +YRL+++
Subjt:  MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTT

Query:  QDVLQGLKSKQEAKLKK---NSSDSDEK----TGNSEMGSEEDINQGI-KKEKNRVSSAG---RSRGWQPSLQSISESIS
        ++V++G+++K+  K+KK     S ++E+    T  SE  S++D  + I +K++  +++ G   + R WQPSLQSISES S
Subjt:  QDVLQGLKSKQEAKLKK---NSSDSDEK----TGNSEMGSEEDINQGI-KKEKNRVSSAG---RSRGWQPSLQSISESIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTGCCAAGCCGTAGACACAGCATCACTAGTCATACAACACCCGACCGGAAAAGTCGACCGGTTATACTGGCCGGTCAACGCCGGCGAGATCATGAAGTCTAA
TCCCGGCCACTACGTCGCTCTTCTCATCTCCACCAAACTCTGCTCGTCGGAAACCACCGCCACCCACCACCGCCGCCGCCGCCATGACGGCAACCGTTCTAATCCTAACT
CGGTCCGGTTGACCCGAATCAAGCTTCTCAAACCCACCGATTCTCTCGTTCTCGGCCAAATTTACCGCCTCGTCACGACCCAAGACGTTTTGCAGGGTTTAAAATCCAAA
CAGGAAGCAAAATTGAAGAAGAACTCATCGGATTCCGATGAAAAAACAGGAAATTCAGAGATGGGATCTGAAGAAGACATAAACCAGGGAATAAAAAAGGAGAAAAACAG
AGTATCATCGGCGGGAAGATCGAGAGGGTGGCAGCCATCTCTGCAAAGCATTTCAGAGAGCATAAGCTGA
mRNA sequenceShow/hide mRNA sequence
CCGCCATAGCCGAACTTCCCAACTCCTAGAGAGAGAAAAAAATTACCAGTAGAGAGAGAAACAAAAACCCAAATGGGAAATTGCCAAGCCGTAGACACAGCATCACTAGT
CATACAACACCCGACCGGAAAAGTCGACCGGTTATACTGGCCGGTCAACGCCGGCGAGATCATGAAGTCTAATCCCGGCCACTACGTCGCTCTTCTCATCTCCACCAAAC
TCTGCTCGTCGGAAACCACCGCCACCCACCACCGCCGCCGCCGCCATGACGGCAACCGTTCTAATCCTAACTCGGTCCGGTTGACCCGAATCAAGCTTCTCAAACCCACC
GATTCTCTCGTTCTCGGCCAAATTTACCGCCTCGTCACGACCCAAGACGTTTTGCAGGGTTTAAAATCCAAACAGGAAGCAAAATTGAAGAAGAACTCATCGGATTCCGA
TGAAAAAACAGGAAATTCAGAGATGGGATCTGAAGAAGACATAAACCAGGGAATAAAAAAGGAGAAAAACAGAGTATCATCGGCGGGAAGATCGAGAGGGTGGCAGCCAT
CTCTGCAAAGCATTTCAGAGAGCATAAGCTGAGGGTTTGTGATTTATGATTTCAAAATGTAATGTTGGAAAGAAATTTATGGGAGTTTTTAGAGTGAGATTTTGTGCATA
AGAAAAAAGTAGAGTTCATCACAGAAACAGAGGAAAATGAAAACAGAAATGGAGAGGTTGTTATATGGAAATACTCTATTTTGCATTTCATTTTGAGATATTGAAAATTG
GGTTTGGAAGGTTCAAATAA
Protein sequenceShow/hide protein sequence
MGNCQAVDTASLVIQHPTGKVDRLYWPVNAGEIMKSNPGHYVALLISTKLCSSETTATHHRRRRHDGNRSNPNSVRLTRIKLLKPTDSLVLGQIYRLVTTQDVLQGLKSK
QEAKLKKNSSDSDEKTGNSEMGSEEDINQGIKKEKNRVSSAGRSRGWQPSLQSISESIS