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Sed0014176 (gene) of Chayote v1 genome

Gene IDSed0014176
OrganismSechium edule (Chayote v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG07:6934826..6935525
RNA-Seq ExpressionSed0014176
SyntenySed0014176
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR026939 - ZNF706/At2g23090 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600413.1 hypothetical protein SDJN03_05646, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1567.65Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
        M RGKQK+EAQKRN +KN+KPK SQ EARA  LKVICPICKV L ++ Q G HY +KHPKEKPP + +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
KYP46136.1 hypothetical protein KK1_032303 [Cajanus cajan]3.5e-1569.12Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
        M RGKQK+EAQKRN +KN+K K SQLEARA GLKVICPICKV L +  Q G HY +KHPKE PP D +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
OAY24306.1 hypothetical protein MANES_17G004800v8 [Manihot esculenta]1.3e-1469.23Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPE
        M RGKQK+EAQ+RN ++N+KPK SQLEARA  LKV CPICKV L ++ Q G HY +KHPKEKPPE
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPE
PKI44032.1 hypothetical protein CRG98_035562 [Punica granatum]6.0e-1569.7Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
        M RGKQK+EAQKRN ++N+KPK SQLEARA GLKVICPICKV L ++ Q   HY +KHPKEKPP +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
TYK16504.1 zinc finger protein 706-like protein [Cucumis melo var. makuwa]2.1e-1571.21Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
        M RGKQK+EAQKRN +KN+KPK SQLEARA  LKVICPICKV L +  Q G HY +KHPKEKPP +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
TrEMBL top hitse value%identityAlignment
A0A151RUB6 C2H2-type domain-containing protein1.7e-1569.12Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
        M RGKQK+EAQKRN +KN+K K SQLEARA GLKVICPICKV L +  Q G HY +KHPKE PP D +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
A0A2C9U4I8 C2H2-type domain-containing protein6.5e-1569.23Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPE
        M RGKQK+EAQ+RN ++N+KPK SQLEARA  LKV CPICKV L ++ Q G HY +KHPKEKPPE
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPE
A0A2I0IJ83 C2H2-type domain-containing protein2.9e-1569.7Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
        M RGKQK+EAQKRN ++N+KPK SQLEARA GLKVICPICKV L ++ Q   HY +KHPKEKPP +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
A0A5D3CZW8 Zinc finger protein 706-like protein1.0e-1571.21Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
        M RGKQK+EAQKRN +KN+KPK SQLEARA  LKVICPICKV L +  Q G HY +KHPKEKPP +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPED
B9S1M3 C2H2-type domain-containing protein8.5e-1564.71Show/hide
Query:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
        M RGKQK+EAQ+RN ++N+KPK SQLEARA  LKVICPICK  L ++ Q G HY +KHPKEKPP + +
Subjt:  MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQN
SwissProt top hitse value%identityAlignment
Q5ZMM5 Zinc finger protein 7062.9e-0440Show/hide
Query:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
        M RG+QK+++Q++N KK     KK    Q  A  A L   C +C+  + D + F  H+E+KHPK   PPE
Subjt:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
Q9D115 Zinc finger protein 7062.9e-0440Show/hide
Query:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
        M RG+QK+++Q++N KK     KK    Q  A  A L   C +C+  + D + F  H+E+KHPK   PPE
Subjt:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
Q9Y5V0 Zinc finger protein 7062.9e-0440Show/hide
Query:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
        M RG+QK+++Q++N KK     KK    Q  A  A L   C +C+  + D + F  H+E+KHPK   PPE
Subjt:  MVRGKQKMEAQKRNEKK----NKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEK-PPE
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAAGAGGAAAACAAAAGATGGAAGCTCAGAAACGAAATGAGAAGAAGAATAAGAAGCCGAAGCGCTCACAGCTCGAAGCCAGAGCCGCTGGCCTGAAAGTTATCTG
CCCTATTTGCAAGGTATCATTAGAAGATAATCAGCAATTTGGTTATCATTATGAGGCCAAACATCCTAAGGAAAAACCACCAGAAGATCAAAATGTGGCTGAATCATCTA
ATTTTCCTGCAGGAAAAGCCTCCAGATCCAAATCTTCTGTTTCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTAAGAGGAAAACAAAAGATGGAAGCTCAGAAACGAAATGAGAAGAAGAATAAGAAGCCGAAGCGCTCACAGCTCGAAGCCAGAGCCGCTGGCCTGAAAGTTATCTG
CCCTATTTGCAAGGTATCATTAGAAGATAATCAGCAATTTGGTTATCATTATGAGGCCAAACATCCTAAGGAAAAACCACCAGAAGATCAAAATGTGGCTGAATCATCTA
ATTTTCCTGCAGGAAAAGCCTCCAGATCCAAATCTTCTGTTTCAAAGTAA
Protein sequenceShow/hide protein sequence
MVRGKQKMEAQKRNEKKNKKPKRSQLEARAAGLKVICPICKVSLEDNQQFGYHYEAKHPKEKPPEDQNVAESSNFPAGKASRSKSSVSK