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Sed0014181 (gene) of Chayote v1 genome

Gene IDSed0014181
OrganismSechium edule (Chayote v1)
DescriptionTubby-like F-box protein
Genome locationLG04:31016341..31018820
RNA-Seq ExpressionSed0014181
SyntenySed0014181
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650509.1 hypothetical protein Csa_010751 [Cucumis sativus]4.4e-1379.63Show/hide
Query:  TTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGP
        +  A+LC LLLS A VTVSADAADCIDGCFTACVQKD R MQRCE KC IKCGP
Subjt:  TTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGP
KAG6600340.1 hypothetical protein SDJN03_05573, partial [Cucurbita argyrosperma subsp. sororia]8.9e-2281.69Show/hide
Query:  MGKPAAATTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDN--EVEDLI
        M K  AATT A+LCF+LLSAAA TVSADAADCIDGCFTACVQKD RLMQRCEGKCRIKCGPD   E ED+I
Subjt:  MGKPAAATTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDN--EVEDLI
KYP63130.1 Tubby-like F-box protein 8 [Cajanus cajan]1.0e-0960Show/hide
Query:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNE
        AA++  L++S+   +V  DA DCIDGC TACVQ+D RL  RCEGKC+IKCGP N+
Subjt:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNE
XP_008456107.1 PREDICTED: uncharacterized protein LOC103496144 isoform X2 [Cucumis melo]1.6e-1878.79Show/hide
Query:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVEDLI
        +AA  AA+LC LLLSA A VTVSADAADCID CFTACVQKD R+MQRCEGKCRIKCGPDN+V++ I
Subjt:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVEDLI
XP_016901882.1 PREDICTED: uncharacterized protein LOC103496144 isoform X1 [Cucumis melo]3.3e-1669.33Show/hide
Query:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------VRLMQRCEGKCRIKCGPDNEVEDLI
        +AA  AA+LC LLLSA A VTVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPDN+V++ I
Subjt:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------VRLMQRCEGKCRIKCGPDNEVEDLI
TrEMBL top hitse value%identityAlignment
A0A0A0LC00 Uncharacterized protein3.5e-1678.33Show/hide
Query:  TTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVED
        +  A+LC LLLS A VTVSADAADCIDGCFTACVQKD R MQRCE KC IKCGPDN+VE+
Subjt:  TTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVED
A0A151T7U7 Tubby-like F-box protein4.9e-1060Show/hide
Query:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNE
        AA++  L++S+   +V  DA DCIDGC TACVQ+D RL  RCEGKC+IKCGP N+
Subjt:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNE
A0A1S3C2J8 uncharacterized protein LOC103496144 isoform X27.6e-1978.79Show/hide
Query:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVEDLI
        +AA  AA+LC LLLSA A VTVSADAADCID CFTACVQKD R+MQRCEGKCRIKCGPDN+V++ I
Subjt:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVEDLI
A0A1S4E0W4 uncharacterized protein LOC103496144 isoform X11.6e-1669.33Show/hide
Query:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------VRLMQRCEGKCRIKCGPDNEVEDLI
        +AA  AA+LC LLLSA A VTVSADAADCID CFTACVQKD          R+MQRCEGKCRIKCGPDN+V++ I
Subjt:  AAATTAALLCFLLLSA-AAVTVSADAADCIDGCFTACVQKD---------VRLMQRCEGKCRIKCGPDNEVEDLI
A0A6A4NXS4 Uncharacterized protein6.5e-1053.45Show/hide
Query:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVED
        A ++   ++ +   TV++DA+DC+D C TACVQ+D RLMQRC+ KC+IKCGPD++VE+
Subjt:  AALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVED
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G25275.1 unknown protein3.9e-0743.75Show/hide
Query:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPD
        M K      A L+   L S+  +   A     DC DGC TACVQ+D R   RC+ KC I+CGPD
Subjt:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPD
AT1G25275.2 unknown protein1.9e-0642.19Show/hide
Query:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPD
        M K      A L+   L S+  +   A     DC DGC TACVQ+D     RC+ KC I+CGPD
Subjt:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPD
AT1G25275.3 unknown protein8.6e-0741.18Show/hide
Query:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVE
        M K      A L+   L S+  +   A     DC DGC TACVQ+D R   RC+ KC I+CGP    E
Subjt:  MGKPAAATTAALLCFLLLSAAAVTVSAD--AADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAAACCTGCGGCGGCGACCACGGCGGCTCTTTTGTGTTTCCTGTTGCTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCTGATTGCATCGACGGCTGCTT
CACTGCCTGTGTCCAGAAAGACGTGAGATTAATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGGTCCAGATAATGAAGTTGAAGATTTGATTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAAACCTGCGGCGGCGACCACGGCGGCTCTTTTGTGTTTCCTGTTGCTTTCTGCGGCGGCGGTGACGGTTTCAGCCGACGCCGCTGATTGCATCGACGGCTGCTT
CACTGCCTGTGTCCAGAAAGACGTGAGATTAATGCAGCGTTGTGAGGGCAAGTGTAGAATTAAATGCGGTCCAGATAATGAAGTTGAAGATTTGATTCATTGA
Protein sequenceShow/hide protein sequence
MGKPAAATTAALLCFLLLSAAAVTVSADAADCIDGCFTACVQKDVRLMQRCEGKCRIKCGPDNEVEDLIH