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Sed0014184 (gene) of Chayote v1 genome

Gene IDSed0014184
OrganismSechium edule (Chayote v1)
Descriptionpathogenesis-related protein PR-4-like
Genome locationLG08:31200328..31203400
RNA-Seq ExpressionSed0014184
SyntenySed0014184
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599313.1 Wound-induced protein WIN1, partial [Cucurbita argyrosperma subsp. sororia]2.4e-6686.01Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC+V +S+ QSASNVRATFNLYNAP+INWD NAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP G+DSCGLCLLVTNTETGAQQT
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVF+SLDT+GNGN NGFL V+YDFVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

XP_022143020.1 pathogenesis-related protein PR-4-like [Momordica charantia]2.9e-6786.9Show/hide
Query:  METKSL-MLATLLLCLC-VVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQ
        METKSL ML  ++LC C V+R+S GQS SNVRAT+NLYNAPQINWDLNAVSAFC+TWDA+QPL+WRSQYGWTAFCGPVGPHGQDSCG CLLVTNTETGAQ
Subjt:  METKSL-MLATLLLCLC-VVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQ

Query:  QTVRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        QTVRIVDQC NGGLDLDVGVFQSLDTNGNGN NGFL VNYDFVNC
Subjt:  QTVRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

XP_022946139.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]4.1e-6686.01Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC+V +S+ QS SNVRATFNLYNAP+INWDLNAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP G+DSCGLCLLVTNTETGAQQ 
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVFQSLDT+GNGN NGFL V+YDFVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

XP_022999104.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]1.4e-6687.41Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC+V +S+ QSASNVRATFNLYNAP+INWDLNAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP GQDSCGLCLLVTNTETGAQQT
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVFQSLDT+GNGN NGFL V+YDFV C
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

XP_023521170.1 pathogenesis-related protein PR-4-like [Cucurbita pepo subsp. pepo]4.1e-6686.01Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC V +S+ QSASNVRATFN YNAP+INWDLNAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP G+DSCGLCLLVTNTET AQQT
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVFQSLDT+GNGN NGFL +NYDFVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LG74 Barwin domain-containing protein6.9e-5987.1Show/hide
Query:  MSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVF
        MS+ QS SNVRATFNLYNAPQINWDLNAVSAFCSTWDA+QPL+WRSQYGWTAFCGP+GP GQ SCGLCLLVTN +TGAQQTVRIVDQC NGGLDLDVGVF
Subjt:  MSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVF

Query:  QSLDTNGNGNFNGFLNVNYDFVNC
        QSLDT+GNG  NGFL +NYDFVNC
Subjt:  QSLDTNGNGNFNGFLNVNYDFVNC

A0A5D3D4F5 Pathogenesis-related protein PR-4-like2.6e-6682.52Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        MET+S++   +LLC C+V MS+ QS SNVRATFNLYNAPQINWDLNAVSAFCSTWDA++PL+WRSQYGWTAFCGP+GPHGQDSCGLCLLVTN +TG Q+T
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC NGGLDLDVGVFQSLDT+GNGN NGFL VNYDFVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

A0A6J1CMK0 pathogenesis-related protein PR-4-like1.4e-6786.9Show/hide
Query:  METKSL-MLATLLLCLC-VVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQ
        METKSL ML  ++LC C V+R+S GQS SNVRAT+NLYNAPQINWDLNAVSAFC+TWDA+QPL+WRSQYGWTAFCGPVGPHGQDSCG CLLVTNTETGAQ
Subjt:  METKSL-MLATLLLCLC-VVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQ

Query:  QTVRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        QTVRIVDQC NGGLDLDVGVFQSLDTNGNGN NGFL VNYDFVNC
Subjt:  QTVRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

A0A6J1G2Y5 pathogenesis-related protein PR-4-like2.0e-6686.01Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC+V +S+ QS SNVRATFNLYNAP+INWDLNAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP G+DSCGLCLLVTNTETGAQQ 
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVFQSLDT+GNGN NGFL V+YDFVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

A0A6J1KG47 pathogenesis-related protein PR-4-like6.9e-6787.41Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        METK LML T L CLC+V +S+ QSASNVRATFNLYNAP+INWDLNAVSAFCSTWDADQPL+WRSQYGWTAFCGPVGP GQDSCGLCLLVTNTETGAQQT
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC+NGGLDLDVGVFQSLDT+GNGN NGFL V+YDFV C
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN12.8e-4972.27Show/hide
Query:  SASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQSLDT
        SA NVRAT+++YN   + WDLNAVSA+CSTWDA++PL WR +YGWTAFCGPVGP G+DSCG CL VTNT TGAQ TVRIVDQC NGGLDLDV VF+ +DT
Subjt:  SASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQSLDT

Query:  NGNGNFNGFLNVNYDFVNC
        +GNGN  G L VNY FV+C
Subjt:  NGNGNFNGFLNVNYDFVNC

P09762 Wound-induced protein WIN22.8e-4971.31Show/hide
Query:  RGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQS
        +G SA NVRAT+++YN   + WDLNAVSA+CSTWDA++P  WRS+YGWTAFCGPVGP G+DSCG CL VTNT TGAQ TVRIVDQC NGGLDLD+ VFQ 
Subjt:  RGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQS

Query:  LDTNGNGNFNGFLNVNYDFVNC
        +DT+G GN  G L VNY FVNC
Subjt:  LDTNGNGNFNGFLNVNYDFVNC

P29062 Pathogenesis-related protein PR-4A7.4e-5067.15Show/hide
Query:  MLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQ
        +   LL+   V+ M+  QSA+NVR+T++LYN   INWDL A SAFC+TWDAD+PL WR +YGWTAFCGP GP GQDSCG CL VTNT TG Q TVRIVDQ
Subjt:  MLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQ

Query:  CDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        C NGGLDLDV VF  LDTNG G   G L VNY+FVNC
Subjt:  CDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

P29063 Pathogenesis-related protein PR-4B3.7e-4966.42Show/hide
Query:  MLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQ
        +   LL+   ++ M+  QSA+NVR+T++LYN   INWDL A SAFC+TWDAD+PL WR +YGWTAFCGP GP GQDSCG CL VTNT TG Q TVRIVDQ
Subjt:  MLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQ

Query:  CDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        C NGGLDLDV VF  LDTNG G   G L VNY+FVNC
Subjt:  CDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

P32045 Pathogenesis-related protein P22.6e-4761.54Show/hide
Query:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT
        ME  + +     +   ++ ++  QSA+NVRAT++LYN   INWDL   S +C+TWDAD+PL+WR +YGWTAFCGP GP GQ SCG CL VTNT TG Q+T
Subjt:  METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQT

Query:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC
        VRIVDQC NGGLDLDV VF  LDTNG G   G LNVNY+FVNC
Subjt:  VRIVDQCDNGGLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 41.9e-4567.77Show/hide
Query:  GQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQSL
        G+SASNVRAT++ YN  Q NWDL AVSA+CSTWDAD+P  WRS+YGWTAFCGP GP GQ SCG CL V NT T A  TVRIVDQC NGGLDLDV +F  +
Subjt:  GQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNGGLDLDVGVFQSL

Query:  DTNGNGNFNGFLNVNYDFVNC
        DT+G G   G L V+Y FV+C
Subjt:  DTNGNGNFNGFLNVNYDFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAAAAAGTTTGATGTTGGCAACGTTGTTGTTGTGTTTGTGTGTTGTAAGGATGTCGAGAGGTCAGAGTGCGAGCAATGTAAGAGCCACATTTAACTTGTACAA
TGCGCCGCAAATTAATTGGGATCTGAACGCAGTGAGTGCATTTTGTTCGACATGGGATGCTGACCAGCCTTTGGATTGGCGCAGCCAATATGGATGGACTGCCTTTTGTG
GCCCTGTTGGTCCCCATGGTCAAGATTCGTGTGGCCTTTGTTTGTTGGTTACAAACACTGAAACAGGTGCTCAACAAACAGTGAGAATTGTTGATCAATGTGATAATGGA
GGCCTGGATTTGGATGTGGGAGTGTTCCAAAGTCTTGACACCAATGGAAATGGAAATTTCAATGGCTTTCTCAATGTCAACTATGATTTTGTCAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAAAAAGTTTGATGTTGGCAACGTTGTTGTTGTGTTTGTGTGTTGTAAGGATGTCGAGAGGTCAGAGTGCGAGCAATGTAAGAGCCACATTTAACTTGTACAA
TGCGCCGCAAATTAATTGGGATCTGAACGCAGTGAGTGCATTTTGTTCGACATGGGATGCTGACCAGCCTTTGGATTGGCGCAGCCAATATGGATGGACTGCCTTTTGTG
GCCCTGTTGGTCCCCATGGTCAAGATTCGTGTGGCCTTTGTTTGTTGGTTACAAACACTGAAACAGGTGCTCAACAAACAGTGAGAATTGTTGATCAATGTGATAATGGA
GGCCTGGATTTGGATGTGGGAGTGTTCCAAAGTCTTGACACCAATGGAAATGGAAATTTCAATGGCTTTCTCAATGTCAACTATGATTTTGTCAATTGTTGA
Protein sequenceShow/hide protein sequence
METKSLMLATLLLCLCVVRMSRGQSASNVRATFNLYNAPQINWDLNAVSAFCSTWDADQPLDWRSQYGWTAFCGPVGPHGQDSCGLCLLVTNTETGAQQTVRIVDQCDNG
GLDLDVGVFQSLDTNGNGNFNGFLNVNYDFVNC