; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014209 (gene) of Chayote v1 genome

Gene IDSed0014209
OrganismSechium edule (Chayote v1)
DescriptionF-box protein
Genome locationLG02:47665064..47666173
RNA-Seq ExpressionSed0014209
SyntenySed0014209
Gene Ontology termsNA
InterPro domainsIPR011043 - Galactose oxidase/kelch, beta-propeller
IPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039746.1 F-box protein [Cucumis melo var. makuwa]3.1e-3037.07Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN
        GIFNPMT+EF   P   +  D+   G G S  T QYK+F    + ++  + +L   R  +N+K+NQW  ++   PI +   GVY+NG IYW+G ++   N
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN

Query:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI
            IYAL+VETE  E+  VL + P S       +L++FNG++YAT Y+        IQ+W+MQ K+ WIK+F+   IPN++     ++   KA E G+I
Subjt:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGNDL
        L  +    F W     GRK      K +    KK  Y    I+ L+F  +P+ILAG +L
Subjt:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGNDL

TYK02998.1 F-box protein [Cucumis melo var. makuwa]2.2e-2836.21Show/hide
Query:  IFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVLRLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRNVNNC
        I NP+T+EFF   I     D + +GFG S KTNQYK+F         ++ + +    H  N+   I +  P N+  HG Y+NG IYWIG E+        
Subjt:  IFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVLRLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRNVNNC

Query:  IYALDVETETCE-VMVLEVSPHSY-PHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFII---PNSYNYKNSNVDFFKASEYGKILVRIEKSLF
        IYALDVETE  E    L+V   S+    +Q  NG+IY T++M +P + +Q+W+MQ K+SWI+ F+I   P  + +        K  EYG ++  ++  LF
Subjt:  IYALDVETETCE-VMVLEVSPHSY-PHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFII---PNSYNYKNSNVDFFKASEYGKILVRIEKSLF

Query:  WW-KPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSIL
             G+K++     T   PD K+  R+  ID+L+F S+P++L
Subjt:  WW-KPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSIL

TYK24751.1 F-box protein [Cucumis melo var. makuwa]1.2e-2936.82Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN
        GIFNPMT+EF   P   +  D+   G G S  T QYK+F    + ++  + +L   R  +N+K+NQW  ++   PI +   GVY+NG IYW+G ++   N
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN

Query:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI
            IYAL+VETE  E+  VL + P S       +L++FNG++YAT Y+        IQ+W+MQ K+ WIK+F+   IPN++     ++   KA E G+I
Subjt:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND
        L  +    F W     GRK      K +    KK  Y    I+ L+F  +P+ILAG +
Subjt:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND

XP_011660339.1 putative F-box protein At1g32420 [Cucumis sativus]1.5e-2736.72Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA--------YRHKSTRKLNVLRLGSNH----KHNQWTSIYLPFPINVQFHGVYMNGVIYW
        GIFNPMT+EFF  P   +   H   GFG    T QYK+F              S   L+VL  G +     K +QW  +Y   P  V+ HG ++NGVIYW
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA--------YRHKSTRKLNVLRLGSNH----KHNQWTSIYLPFPINVQFHGVYMNGVIYW

Query:  IGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFIIPNSYNYKNSNVDFFKASEYGKI
        +G E K +N    +Y LDVETE  ++  VLEV    +  ++Q+FNGT+YA  +M +     Q+W+MQ KNSWI+DF+I       + N+   KA E G++
Subjt:  IGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFIIPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFW-WKPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND
        L  ++ ++FW + P    +    K L   ++K  +   C   L+F S+ +ILAG++
Subjt:  LVRIEKSLFW-WKPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND

XP_038890298.1 F-box protein At3g07870-like [Benincasa hispida]5.7e-3238.55Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA-------YRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIG
        GIFNPMT+EF   P   +  D    GFG +T T QYK+F            +S   ++VL   R G+N  HNQW  ++   P+++  +G Y+NG IYWIG
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA-------YRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIG

Query:  TEKKNRNVNNCIYALDVETETCEV-MVLEVSP---HSYPHTLQKFNGTIYATIYMGKPI-YQIQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKAS
         E++  N    IY LDVETE  E+ +VLE+ P    S    +Q+FN ++YA   + +P    IQ+W+MQ K+ WI++F+   IPN +N     +   KA 
Subjt:  TEKKNRNVNNCIYALDVETETCEV-MVLEVSP---HSYPHTLQKFNGTIYATIYMGKPI-YQIQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKAS

Query:  EYGKILVRIEKSLF-WWKP--GRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGN
        E G+IL  +    F W+ P  GRK      K +   +KKI Y    I SL+F  +P+ILAG+
Subjt:  EYGKILVRIEKSLF-WWKP--GRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGN

TrEMBL top hitse value%identityAlignment
A0A0A0LSE0 F-box domain-containing protein7.1e-2836.72Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA--------YRHKSTRKLNVLRLGSNH----KHNQWTSIYLPFPINVQFHGVYMNGVIYW
        GIFNPMT+EFF  P   +   H   GFG    T QYK+F              S   L+VL  G +     K +QW  +Y   P  V+ HG ++NGVIYW
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLA--------YRHKSTRKLNVLRLGSNH----KHNQWTSIYLPFPINVQFHGVYMNGVIYW

Query:  IGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFIIPNSYNYKNSNVDFFKASEYGKI
        +G E K +N    +Y LDVETE  ++  VLEV    +  ++Q+FNGT+YA  +M +     Q+W+MQ KNSWI+DF+I       + N+   KA E G++
Subjt:  IGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFIIPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFW-WKPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND
        L  ++ ++FW + P    +    K L   ++K  +   C   L+F S+ +ILAG++
Subjt:  LVRIEKSLFW-WKPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND

A0A5A7TCF3 F-box protein1.5e-3037.07Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN
        GIFNPMT+EF   P   +  D+   G G S  T QYK+F    + ++  + +L   R  +N+K+NQW  ++   PI +   GVY+NG IYW+G ++   N
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN

Query:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI
            IYAL+VETE  E+  VL + P S       +L++FNG++YAT Y+        IQ+W+MQ K+ WIK+F+   IPN++     ++   KA E G+I
Subjt:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGNDL
        L  +    F W     GRK      K +    KK  Y    I+ L+F  +P+ILAG +L
Subjt:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGNDL

A0A5A7TE00 F-box protein2.7e-2735.61Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYR--------HKSTRKLNVL----RLGSNHKHNQWTSIY-LPFPINVQFHGVYMNGVIY
        GIFNPMT+EFF  P   +  D  S   G S  T QYK+F              ++  ++VL    R  +NH H+QW  ++ LP  I+   +G Y+NGVIY
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYR--------HKSTRKLNVL----RLGSNHKHNQWTSIY-LPFPINVQFHGVYMNGVIY

Query:  WIGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPH--TLQKFNGTIYATIYMGKPIY--QIQLWKMQSKNSWIKDFIIPN-SYNYKNSNVDFFKA
        WIGT++   N    IYA++VETE  E+  +L++ P S     +L++FN ++YAT ++    Y   IQ+W+MQ K+ WI++F+I +   N+  S++   KA
Subjt:  WIGTEKKNRNVNNCIYALDVETETCEV-MVLEVSPHSYPH--TLQKFNGTIYATIYMGKPIY--QIQLWKMQSKNSWIKDFIIPN-SYNYKNSNVDFFKA

Query:  SEYGKILVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND
         E G+IL  I    F W     GR       K ++  ++K   R   I+ L+F  + +ILAG +
Subjt:  SEYGKILVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND

A0A5D3BVH7 F-box protein1.1e-2836.21Show/hide
Query:  IFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVLRLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRNVNNC
        I NP+T+EFF   I     D + +GFG S KTNQYK+F         ++ + +    H  N+   I +  P N+  HG Y+NG IYWIG E+        
Subjt:  IFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVLRLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRNVNNC

Query:  IYALDVETETCE-VMVLEVSPHSY-PHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFII---PNSYNYKNSNVDFFKASEYGKILVRIEKSLF
        IYALDVETE  E    L+V   S+    +Q  NG+IY T++M +P + +Q+W+MQ K+SWI+ F+I   P  + +        K  EYG ++  ++  LF
Subjt:  IYALDVETETCE-VMVLEVSPHSY-PHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFII---PNSYNYKNSNVDFFKASEYGKILVRIEKSLF

Query:  WW-KPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSIL
             G+K++     T   PD K+  R+  ID+L+F S+P++L
Subjt:  WW-KPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSIL

A0A5D3DMB7 F-box protein5.8e-3036.82Show/hide
Query:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN
        GIFNPMT+EF   P   +  D+   G G S  T QYK+F    + ++  + +L   R  +N+K+NQW  ++   PI +   GVY+NG IYW+G ++   N
Subjt:  GIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVL---RLGSNHKHNQWTSIYLPFPINVQFHGVYMNGVIYWIGTEKKNRN

Query:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI
            IYAL+VETE  E+  VL + P S       +L++FNG++YAT Y+        IQ+W+MQ K+ WIK+F+   IPN++     ++   KA E G+I
Subjt:  VNNCIYALDVETETCEV-MVLEVSPHSYPH----TLQKFNGTIYATIYMGKPIYQ--IQLWKMQSKNSWIKDFI---IPNSYNYKNSNVDFFKASEYGKI

Query:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND
        L  +    F W     GRK      K +    KK  Y    I+ L+F  +P+ILAG +
Subjt:  LVRIEKSLFWWK---PGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGND

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACATTATAGATTGGGGGCTTCCACTTCCACTACATATTGCTCCCTTTATCCTTGTCGTTTCTAATAACGATTTTCAAGGTATATTTAATCCAATGACCCATGA
ATTTTTTCCAACTCCTATTTTTACGGTTTCACGTGATCATTTATCCTTGGGATTTGGTTTAAGCACTAAGACCAACCAATACAAAGTTTTCTTAGCCTACCGCCACAAGT
CCACTCGCAAGTTGAACGTTTTAAGGTTAGGTAGCAACCATAAACATAATCAATGGACCTCTATTTATCTACCTTTTCCCATCAATGTTCAATTTCATGGTGTATATATG
AATGGAGTCATTTATTGGATTGGAACCGAGAAAAAAAATAGAAACGTCAATAATTGCATATATGCTCTTGACGTTGAAACTGAAACATGTGAAGTGATGGTCCTGGAAGT
TAGCCCTCACTCCTACCCACATACGCTTCAAAAATTTAATGGCACCATTTATGCAACAATTTATATGGGTAAGCCAATATACCAAATTCAATTGTGGAAGATGCAATCCA
AAAATTCTTGGATTAAAGATTTTATTATTCCTAACTCTTACAACTACAAGAATTCAAACGTGGACTTCTTTAAAGCCTCCGAATATGGAAAGATATTGGTTAGAATAGAA
AAGAGTTTGTTTTGGTGGAAGCCTGGGAGGAAGATTGAGGAGGAGGAGATAAAAACATTGATTGCACCTGATAAAAAAATTACATACAGGTGGCATTGTATAGATTCCTT
GCATTTTGATTCCATTCCGAGCATTCTGGCAGGGAATGACCTGTCCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACATTATAGATTGGGGGCTTCCACTTCCACTACATATTGCTCCCTTTATCCTTGTCGTTTCTAATAACGATTTTCAAGGTATATTTAATCCAATGACCCATGA
ATTTTTTCCAACTCCTATTTTTACGGTTTCACGTGATCATTTATCCTTGGGATTTGGTTTAAGCACTAAGACCAACCAATACAAAGTTTTCTTAGCCTACCGCCACAAGT
CCACTCGCAAGTTGAACGTTTTAAGGTTAGGTAGCAACCATAAACATAATCAATGGACCTCTATTTATCTACCTTTTCCCATCAATGTTCAATTTCATGGTGTATATATG
AATGGAGTCATTTATTGGATTGGAACCGAGAAAAAAAATAGAAACGTCAATAATTGCATATATGCTCTTGACGTTGAAACTGAAACATGTGAAGTGATGGTCCTGGAAGT
TAGCCCTCACTCCTACCCACATACGCTTCAAAAATTTAATGGCACCATTTATGCAACAATTTATATGGGTAAGCCAATATACCAAATTCAATTGTGGAAGATGCAATCCA
AAAATTCTTGGATTAAAGATTTTATTATTCCTAACTCTTACAACTACAAGAATTCAAACGTGGACTTCTTTAAAGCCTCCGAATATGGAAAGATATTGGTTAGAATAGAA
AAGAGTTTGTTTTGGTGGAAGCCTGGGAGGAAGATTGAGGAGGAGGAGATAAAAACATTGATTGCACCTGATAAAAAAATTACATACAGGTGGCATTGTATAGATTCCTT
GCATTTTGATTCCATTCCGAGCATTCTGGCAGGGAATGACCTGTCCTTTTAG
Protein sequenceShow/hide protein sequence
MENIIDWGLPLPLHIAPFILVVSNNDFQGIFNPMTHEFFPTPIFTVSRDHLSLGFGLSTKTNQYKVFLAYRHKSTRKLNVLRLGSNHKHNQWTSIYLPFPINVQFHGVYM
NGVIYWIGTEKKNRNVNNCIYALDVETETCEVMVLEVSPHSYPHTLQKFNGTIYATIYMGKPIYQIQLWKMQSKNSWIKDFIIPNSYNYKNSNVDFFKASEYGKILVRIE
KSLFWWKPGRKIEEEEIKTLIAPDKKITYRWHCIDSLHFDSIPSILAGNDLSF