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Sed0014217 (gene) of Chayote v1 genome

Gene IDSed0014217
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:18729364..18730072
RNA-Seq ExpressionSed0014217
SyntenySed0014217
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7013176.1 unnamed protein product [Microthlaspi erraticum]2.4e-6971.86Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESVRGL GGGLPCGGCQRFESAYLQL ++           FRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
        EMLRGVENKRRSGDSRIG+  +                          + +   SPVAESIT L SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP

CAF1728876.1 unnamed protein product [Brassica napus]1.3e-6770.85Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESVRGL GGGLPCGGCQRFESAYLQL ++           FRFGSSIY  SFMDVDKI PFSSTLGWHSLKVK EVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
        EMLRGVENKRRSGDSRIG+  +                          + +   SPVAESIT L SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP

CAF4958888.1 unnamed protein product [Pieris macdunnoughi]2.4e-6971.86Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESVRGL GGGLPCGGCQRFESAYLQL ++           FRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
        EMLRGVENKRRSGDSRIG+  +                          + +   SPVAESIT L SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP

KAG7528872.1 hypothetical protein ISN44_Un153g000040 [Arabidopsis suecica]4.4e-6871.21Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESVRGL GGGLPCGGCQRFESAYLQL ++           FRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV
        EMLRGVENKRRSGDSRIG+  +                          + +   SPVAESIT L SDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV

OVA05688.1 hypothetical protein BVC80_4285g1 [Macleaya cordata]1.0e-8081.77Show/hide
Query:  GLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGV
        GLRGGGLPCGGCQRFESAYLQL ++           FRFGSSIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGV
Subjt:  GLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGV

Query:  ENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV
        ENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS       + +   SPVAESIT LRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Subjt:  ENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV

TrEMBL top hitse value%identityAlignment
A0A200Q5G5 Uncharacterized protein ycf684.9e-8181.77Show/hide
Query:  GLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGV
        GLRGGGLPCGGCQRFESAYLQL ++           FRFGSSIYDLSFMDVDKIL FSSTLGWHSLKV GEVQT+KGLRWIPRHPETRKGV SDEMLRGV
Subjt:  GLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGV

Query:  ENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV
        ENK RSGDSRIGQPF+LLLNPWAGKRQPGELKHLS       + +   SPVAESIT LRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Subjt:  ENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV

A0A2N9HUL9 Uncharacterized protein ycf689.1e-6785.53Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESV GLRGGGLPCGGCQRFESAYLQL ++           FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIP
        EMLRGVENKRRSGDSRIGQPF+LLLNPWAGKRQPGELKHLSSQRK  +K  P
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIP

A0A2P2JY74 Uncharacterized protein ycf682.7e-6383.12Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVV
        MVESV G RGGGLP GGCQRFESAYLQL ++           FRFGSSIYDLSFMDVDKILPFSSTLGWHS  LKVKGEVQT+KGLRWIPRHPETRKGVV
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHS--LKVKGEVQTKKGLRWIPRHPETRKGVV

Query:  SDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIP
        SDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLS+QRK  +K  P
Subjt:  SDEMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIP

A0A5N6MLP8 Uncharacterized protein ycf681.1e-6470.16Show/hide
Query:  LRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVE
        LRGGGLPCGGCQRFESAYLQL ++           FRFG SIYDLSFMDVDKI PFSSTLGWHSLK+KGEVQT+KGLRWIPRHPETRKGVVSDEMLRGVE
Subjt:  LRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVE

Query:  NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV
        NK RSGDSRIG+  +                            +   SPVAESIT LRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSE V
Subjt:  NKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVV

A0A6D2I321 Uncharacterized protein ycf681.1e-6971.86Show/hide
Query:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD
        MVESVRGL GGGLPCGGCQRFESAYLQL ++           FRFGSSIYD SFMDVDKI PFSSTLGWHSLKVKGEVQT+KGLRWIPRHPETRKGVVSD
Subjt:  MVESVRGLRGGGLPCGGCQRFESAYLQLHSI-----------FRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSD

Query:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
        EMLRGVENKRRSGDSRIG+  +                          + +   SPVAESIT L SDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP
Subjt:  EMLRGVENKRRSGDSRIGQPFKLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGAATCAGTCAGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCCACTCCATTTTCCGATTCGGCAGTTC
GATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTAC
GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTC
AAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAGAAAGCAAAAAAGCGATTCCCATGGCGAGTCCAGTAGC
CGAAAGCATCACTGGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATA
GTGAAGTAGTACCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTAGAATCAGTCAGGGGCCTGAGAGGCGGTGGTTTACCCTGTGGCGGATGTCAGCGGTTCGAGTCCGCTTATCTCCAACTCCACTCCATTTTCCGATTCGGCAGTTC
GATCTATGATTTATCATTCATGGACGTTGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAAGAAAGGCTTAC
GGTGGATACCTAGGCACCCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAACCTTTC
AAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAGAAAGCAAAAAAGCGATTCCCATGGCGAGTCCAGTAGC
CGAAAGCATCACTGGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGCTAAATACTCCTGGGTGACCGATA
GTGAAGTAGTACCGTGA
Protein sequenceShow/hide protein sequence
MVESVRGLRGGGLPCGGCQRFESAYLQLHSIFRFGSSIYDLSFMDVDKILPFSSTLGWHSLKVKGEVQTKKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQPF
KLLLNPWAGKRQPGELKHLSSQRKESKKAIPMASPVAESITGLRSDPSSMGHVESRVNQQGPPCKAKYSWVTDSEVVP