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Sed0014253 (gene) of Chayote v1 genome

Gene IDSed0014253
OrganismSechium edule (Chayote v1)
Descriptionarabinogalactan peptide 13-like
Genome locationLG08:9490956..9491579
RNA-Seq ExpressionSed0014253
SyntenySed0014253
Gene Ontology termsGO:0031225 - anchored component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-1074.58Show/hide
Query:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
        M AMKF+ALMV MVV VMA SSSIV A +A AP P SDA  SLPTLMASLAPL L FFL
Subjt:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]5.4e-1279.66Show/hide
Query:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
        MEAMKFQALM+ MVVG MALSS+IV A +A AP P SDAS SLPTLMASLAPLAL FFL
Subjt:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
XP_011660059.1 arabinogalactan protein 13 [Cucumis sativus]5.4e-0457.63Show/hide
Query:  AMKFQALMVTMVVGVM---ALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF
        A +FQ LMVTM+V V+   + SS+IV A +A AP P SDAS S+PTLMAS  PL   FF
Subjt:  AMKFQALMVTMVVGVM---ALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF
XP_022988237.1 arabinogalactan peptide 13-like [Cucurbita maxima]2.0e-1177.97Show/hide
Query:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
        MEAMKFQALM+ MVVG MALSS+IV A +A AP P SDA  SLPTLMASLAPLAL FFL
Subjt:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]4.4e-0670.49Show/hide
Query:  MEAMKFQAL-MVTMVVGVMAL-SSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
        MEAMK QAL M+ MVV +MA  SSSIV A +A AP P SDA  SLPTLMASLAPL L FFL
Subjt:  MEAMKFQAL-MVTMVVGVMAL-SSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
TrEMBL top hitse value%identityAlignment
A0A0A0LWU9 Uncharacterized protein2.6e-0457.63Show/hide
Query:  AMKFQALMVTMVVGVM---ALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF
        A +FQ LMVTM+V V+   + SS+IV A +A AP P SDAS S+PTLMAS  PL   FF
Subjt:  AMKFQALMVTMVVGVM---ALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF
A0A6J1JCI6 arabinogalactan peptide 13-like9.9e-1277.97Show/hide
Query:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
        MEAMKFQALM+ MVVG MALSS+IV A +A AP P SDA  SLPTLMASLAPLAL FFL
Subjt:  MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G56540.1 arabinogalactan protein 149.8e-0450Show/hide
Query:  MEAMKFQALMVTMVVGVMALSS--SIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF
        MEAMK + L V ++V V+A S+    V A DA AP P SDAS  +PT  AS+A +A  FF
Subjt:  MEAMKFQALMVTMVVGVMALSS--SIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCAATGAAGTTTCAAGCTTTAATGGTGACAATGGTGGTTGGAGTTATGGCTTTGTCAAGCTCCATTGTTGTAGCTCATGATGCTCTTGCCCCAGGCCCTCACTC
TGATGCATCATTTTCTCTCCCAACTTTGATGGCTTCTCTTGCTCCTCTTGCTCTTGCCTTTTTTCTCTAA
mRNA sequenceShow/hide mRNA sequence
CACCAAAAAAAATGGAAAAACAAAAAATCAATAAATAATAACAATAACACTTTGTTTGGCTATAAATACCAGCACCCTCTCTATTTCTCTCAATCAATCCTTAGTTTGAA
GAAACCAAGAGAACCCCAATTGAAAGGTTTGAAATTTGAGGATAAAAATCAAAGCTTTAAGGTTTATTTAGAAATGGAAGCAATGAAGTTTCAAGCTTTAATGGTGACAA
TGGTGGTTGGAGTTATGGCTTTGTCAAGCTCCATTGTTGTAGCTCATGATGCTCTTGCCCCAGGCCCTCACTCTGATGCATCATTTTCTCTCCCAACTTTGATGGCTTCT
CTTGCTCCTCTTGCTCTTGCCTTTTTTCTCTAAATTTCATCTTTTTTGTTTTCCTTTATTATATTTAATTTCAGTCACTAGTTATTGTAAGTGTTAATTATGTGTATATG
TCTGTGTGTTTAAAACCCCATGTTGTTCATTTTCTCTCTAGAAAACTAGCACTAGGAAGAAATGGATTGGGTTGGTTATCAATTGTTTGGGTGTGATTTGGGTTTTTATA
TTTTCAATATTTAATGTTATGATCTTTCAATACTCTTTGTTAAATTGAAAGCTATGCAATTTGCTTCATTCCCC
Protein sequenceShow/hide protein sequence
MEAMKFQALMVTMVVGVMALSSSIVVAHDALAPGPHSDASFSLPTLMASLAPLALAFFL