; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014286 (gene) of Chayote v1 genome

Gene IDSed0014286
OrganismSechium edule (Chayote v1)
DescriptionHTH-type transcriptional regulator
Genome locationLG01:969544..970245
RNA-Seq ExpressionSed0014286
SyntenySed0014286
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605242.1 hypothetical protein SDJN03_02559, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5075.16Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVL K PA+FICNSD+MDF+ VV AVD  DELQLG LYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  P VF  EE RK PR+       SGGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE

XP_022947655.1 uncharacterized protein LOC111451454 [Cucurbita moschata]1.7e-5177.12Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVL K PASFICNSD+MDF+ VV AVD  DELQLGQLYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGSPPA-VFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  A VFS EE RK PR+       SGGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGSPPA-VFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE

XP_023007426.1 uncharacterized protein LOC111499928 [Cucurbita maxima]2.6e-5277.78Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVLQK PASFICNSD+MDF+ VV AVD  DELQLGQLYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  P VFS EE RK PR       R+GGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE

XP_023533314.1 uncharacterized protein LOC111795245 isoform X1 [Cucurbita pepo subsp. pepo]7.7e-5277.12Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVL K PASFICNSD+MDF+ VV AVD  DELQLGQLYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  P VF  EE RK PR       RSGGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE

XP_038902080.1 uncharacterized protein LOC120088720 [Benincasa hispida]5.9e-5274.19Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+C+SSD+ N ATAKLILTDGTL+E+SYPVKVSY+LQK+PASFICNSDEMDFD VV AVD  DELQLGQLYFALPL++ N+ L AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-----PPAVFSGEEFRKVPRR-----SGGSRKFTAKLSAIPE
        +KAGGG +EKCGS      P  FS EEFRK PR+     SG SRKFTAKLSAIPE
Subjt:  VKAGGGRSEKCGS-----PPAVFSGEEFRKVPRR-----SGGSRKFTAKLSAIPE

TrEMBL top hitse value%identityAlignment
A0A1S3C5X7 uncharacterized protein LOC1034974042.8e-4769.62Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+C+SSDS N ATAKLIL DGTL+EYSYPVKVSYVLQK+P+SFICNSD+MDFD VV AVD  DELQLGQLYFALPLE+ N+R+ AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRS-EKCGSPPAVF-------SGEEFRKVPR-----RSGGSRKFTAKLSAIPE
        +K GGG   EKCGS              E FRK PR     + GGSRKF AKLSAIPE
Subjt:  VKAGGGRS-EKCGSPPAVF-------SGEEFRKVPR-----RSGGSRKFTAKLSAIPE

A0A5A7TWF7 HTH-type transcriptional regulator protein ptxE2.8e-4769.62Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+C+SSDS N ATAKLIL DGTL+EYSYPVKVSYVLQK+P+SFICNSD+MDFD VV AVD  DELQLGQLYFALPLE+ N+R+ AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRS-EKCGSPPAVF-------SGEEFRKVPR-----RSGGSRKFTAKLSAIPE
        +K GGG   EKCGS              E FRK PR     + GGSRKF AKLSAIPE
Subjt:  VKAGGGRS-EKCGSPPAVF-------SGEEFRKVPR-----RSGGSRKFTAKLSAIPE

A0A6J1D8L2 uncharacterized protein LOC1110179244.5e-5074.84Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N ATAKLILTDGTL+EYSYPVKVSYVLQK PASFICNSDEMDFD VV+A+D GDELQLGQLYFALPL++ N+ L AE+MAALAVKAS+AL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-----PPAVFSGEEFRKVPRR-----SGGSRKFTAKLSAIPE
        +KAGG   EKCGS      PA+FS EEF KV R      SG  RKFTAKLSAIPE
Subjt:  VKAGGGRSEKCGS-----PPAVFSGEEFRKVPRR-----SGGSRKFTAKLSAIPE

A0A6J1G7I2 uncharacterized protein LOC1114514548.3e-5277.12Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVL K PASFICNSD+MDF+ VV AVD  DELQLGQLYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGSPPA-VFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  A VFS EE RK PR+       SGGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGSPPA-VFSGEEFRKVPRR-------SGGSRKFTAKLSAIPE

A0A6J1L0H7 uncharacterized protein LOC1114999281.3e-5277.78Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+CISSDS N +TAKLIL+DGTL+EYSYPVKVSYVLQK PASFICNSD+MDF+ VV AVD  DELQLGQLYFALPLEK N+ L AEDMAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE
        +KAGGG SEKCGS  P VFS EE RK PR       R+GGSRKFTAKL AIPE
Subjt:  VKAGGGRSEKCGS-PPAVFSGEEFRKVPR-------RSGGSRKFTAKLSAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein1.2e-1841.13Show/hide
Query:  MGLCISSDSGNF----ATAKLILTDGTLIEYSYPVKVSYVLQKYPAS----------FICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPA
        MGLC+S +   +     TAK++  +G L EY  PV  S VL+    S          F+CNSD + +D  + A++  + LQ  Q+YF LP+ KR  RL A
Subjt:  MGLCISSDSGNF----ATAKLILTDGTLIEYSYPVKVSYVLQKYPAS----------FICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPA

Query:  EDMAALAVKASSALVKAGGGRSEK
         DMAALAVKAS A+ KA G ++ +
Subjt:  EDMAALAVKASSALVKAGGGRSEK

AT2G23690.1 unknown protein1.4e-3554.6Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+C S +S   ATAKLIL DG ++E++ PVKV YVLQK P  FICNSD+MDFD VV+A+   +E QLGQLYFALPL   +  L AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGG--GRSE-----KCGSP--------PAVFSGEEFRKVPRRSGGS---RKFTAKLSAIPE
        +++GG  GR +     KC SP         AV +  E R   RR GG    RK+ AKLS I E
Subjt:  VKAGG--GRSE-----KCGSP--------PAVFSGEEFRKVPRRSGGS---RKFTAKLSAIPE

AT3G50800.1 unknown protein1.0e-3051.97Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG C S +S    TAKLIL DGTL E+S PVKV  +LQK P SF+CNSD+MDFD  V AV G ++L+ G+LYF LPL   N  L A++MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGRSE-------KCGSPPAVFSGEEFRKVPRRSGGSRKFTAKLSAIPE
         K+GGG          +C       +G   R       G RKFTA+LS+I E
Subjt:  VKAGGGRSE-------KCGSPPAVFSGEEFRKVPRRSGGSRKFTAKLSAIPE

AT4G37240.1 unknown protein5.0e-3351.79Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG+C SS+S   ATAKLIL DG ++E++ PVKV YVL KYP  FICNSD+MDFD  VAA+   +ELQLGQ+YFALPL    + L AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGGGR-SEKCGSP--------------PAVFSGEEFRKVPRRSGG-----SRK---FTAKLSAIPE
        ++ GGG    KC  P                V SG   RKV    GG     SR+   + A+LS I E
Subjt:  VKAGGGR-SEKCGSP--------------PAVFSGEEFRKVPRRSGG-----SRK---FTAKLSAIPE

AT5G66580.1 unknown protein1.8e-3050.64Show/hide
Query:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL
        MG C S +S    +AKLIL DGTL E+S PVKV  +LQK P SF+CNSDEMDFD  V+AV G +EL+ GQLYF LPL   N  L AE+MAALAVKASSAL
Subjt:  MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSAL

Query:  VKAGG----GRSEKCGSPPAVFSGEEFRKVPRRSG-------GSRKFTAKLSAIPE
         K+GG       +   +    +  +    V    G       G R+FTA LS I E
Subjt:  VKAGG----GRSEKCGSPPAVFSGEEFRKVPRRSG-------GSRKFTAKLSAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTTGCATTTCCTCCGATTCCGGCAATTTCGCAACGGCCAAATTGATTCTTACGGACGGAACGTTGATCGAATATTCGTACCCAGTCAAGGTCTCGTACGTGCT
TCAAAAATATCCGGCGAGTTTTATCTGCAACTCCGACGAGATGGACTTCGACGGCGTGGTCGCCGCCGTTGACGGCGGCGACGAGCTCCAACTTGGGCAGCTTTACTTTG
CGCTGCCGTTGGAGAAGAGGAACCGGCGGCTGCCGGCGGAGGACATGGCGGCGTTGGCGGTGAAGGCCAGCTCGGCGCTCGTGAAGGCCGGCGGCGGTCGGAGTGAGAAA
TGTGGGTCGCCGCCGGCGGTGTTTTCCGGGGAGGAGTTTAGGAAGGTTCCGAGAAGGAGTGGTGGGAGTAGAAAATTCACTGCTAAGCTTAGTGCGATTCCGGAATGA
mRNA sequenceShow/hide mRNA sequence
GCCGAGTCAAATTCCACAACTCGCTCTCGCCTGACTCACTGAGTTCGTCCAACTCGGACCCGAAATAAATGGGTCTTTGCATTTCCTCCGATTCCGGCAATTTCGCAACG
GCCAAATTGATTCTTACGGACGGAACGTTGATCGAATATTCGTACCCAGTCAAGGTCTCGTACGTGCTTCAAAAATATCCGGCGAGTTTTATCTGCAACTCCGACGAGAT
GGACTTCGACGGCGTGGTCGCCGCCGTTGACGGCGGCGACGAGCTCCAACTTGGGCAGCTTTACTTTGCGCTGCCGTTGGAGAAGAGGAACCGGCGGCTGCCGGCGGAGG
ACATGGCGGCGTTGGCGGTGAAGGCCAGCTCGGCGCTCGTGAAGGCCGGCGGCGGTCGGAGTGAGAAATGTGGGTCGCCGCCGGCGGTGTTTTCCGGGGAGGAGTTTAGG
AAGGTTCCGAGAAGGAGTGGTGGGAGTAGAAAATTCACTGCTAAGCTTAGTGCGATTCCGGAATGATTTGGGTTTTCTTTTTAGGGCTAAAATTGTAAATGTGATGTTTT
TGGTTTGGGTTTTTTTTAAAATATTTTTTGGAGATGGAAGAGGTTGCTTTTTGTGGATGTTTTTGTTACTTGTGCATCCCATGGCAATTACAATCTTCCAGTTTTACATA
TGTACCTCCTATTAATGAAAACTTCTCTAAACAATTTTTATA
Protein sequenceShow/hide protein sequence
MGLCISSDSGNFATAKLILTDGTLIEYSYPVKVSYVLQKYPASFICNSDEMDFDGVVAAVDGGDELQLGQLYFALPLEKRNRRLPAEDMAALAVKASSALVKAGGGRSEK
CGSPPAVFSGEEFRKVPRRSGGSRKFTAKLSAIPE