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Sed0014350 (gene) of Chayote v1 genome

Gene IDSed0014350
OrganismSechium edule (Chayote v1)
DescriptionThylakoid soluble phosphoprotein TSP
Genome locationLG01:6355326..6356184
RNA-Seq ExpressionSed0014350
SyntenySed0014350
Gene Ontology termsNA
InterPro domainsIPR021584 - Thylakoid soluble phosphoprotein TSP9
IPR037244 - Thylakoid soluble phosphoprotein TSP9 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010512.1 hypothetical protein SDJN02_27306, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-2775Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS-NGARKNSVQLPPKKNGGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G +E+D LLETDPVLQKV+GK S + + +G RKNSVQ+PPKKNGGFGGLFAK+D
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS-NGARKNSVQLPPKKNGGFGGLFAKKD
XP_004143212.1 uncharacterized protein LOC101205268 [Cucumis sativus]3.8e-2572.16Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGK-----GSTAASNGARKNSVQLPPKKN-GGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G + KD LLETDPVLQKV+GK       T +  G RKNSVQ+PPKKN GGFGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGK-----GSTAASNGARKNSVQLPPKKN-GGFGGLFAKKD
XP_008464052.1 PREDICTED: uncharacterized protein LOC103502033 [Cucumis melo]1.1e-2471.88Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G + KD LLETDPVLQKV+GK  T+ +       RKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
XP_022947653.1 uncharacterized protein LOC111451452 [Cucurbita moschata]3.6e-2876.84Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
        MASL+FAFSPAAGRVFAATAAK  GEGK EKG+ DWILGGMEKD LLETDPVLQKV+GK   A +     G +KNSVQ+PPKKNG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
XP_023532336.1 uncharacterized protein LOC111794525 [Cucurbita pepo subsp. pepo]1.8e-2775.79Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
        MASL+FAFSPAAGRVFAATAAK  GE K EKG+ DWILGGMEKD LLETDPVLQKV+GK   A +     G +KNSVQ+PPKKNG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
TrEMBL top hitse value%identityAlignment
A0A0A0KC59 Uncharacterized protein1.8e-2572.16Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGK-----GSTAASNGARKNSVQLPPKKN-GGFGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G + KD LLETDPVLQKV+GK       T +  G RKNSVQ+PPKKN GGFGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGK-----GSTAASNGARKNSVQLPPKKN-GGFGGLFAKKD
A0A1S3CKK5 uncharacterized protein LOC1035020335.3e-2571.88Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G + KD LLETDPVLQKV+GK  T+ +       RKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
A0A5A7V5S9 Uncharacterized protein5.3e-2571.88Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
        MASL  AFSPAAGRVFAATAAK  GE K EKGL DWI+G + KD LLETDPVLQKV+GK  T+ +       RKNSVQ+PPKKNGG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASN----GARKNSVQLPPKKNGG-FGGLFAKKD
A0A6J1G777 uncharacterized protein LOC1114514521.8e-2876.84Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
        MASL+FAFSPAAGRVFAATAAK  GEGK EKG+ DWILGGMEKD LLETDPVLQKV+GK   A +     G +KNSVQ+PPKKNG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
A0A6J1L2X7 uncharacterized protein LOC1114999271.8e-2876.84Show/hide
Query:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
        MASL+FAFSPAAGRVFAATAAK  GEGK EKG+ DWILGGMEKD LLETDPVLQKV+GK   A +     G +KNSVQ+PPKKNG FGGLFAKKD
Subjt:  MASLAFAFSPAAGRVFAATAAK--GEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAAS----NGARKNSVQLPPKKNGGFGGLFAKKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTCTTGCCTTCGCATTCTCTCCGGCCGCCGGACGGGTGTTCGCAGCCACGGCGGCGAAGGGCGAAGGCAAGAGCGAAAAGGGCCTTTTTGATTGGATCCTAGG
TGGCATGGAGAAAGATCATCTCCTTGAAACCGACCCTGTCCTTCAAAAGGTCGACGGCAAGGGCAGCACCGCCGCCTCCAACGGCGCCAGGAAGAACTCCGTCCAACTCC
CCCCCAAGAAAAACGGCGGCTTTGGCGGCCTTTTTGCCAAGAAAGACTGA
mRNA sequenceShow/hide mRNA sequence
AATATTACTTAAAATGGGGCGGCCCATAATGGAGGAGAGCCGACAGAAGCCCATCCTACAAAGCTACAGAGAATCGACGTGTCGAATCAGCAGCCAAGCGTGGTGGGCGA
TTAATCGTGAAGCGCACAGCACAGTTGCGGGTTGGTTGGGTAAAGGATAAGGCGCTTGTGGTGAGCTCAAGCGCTTCAACCATCCCAAATCCGCCTCTTATTTTACGCTC
TAATATCCCTTCCCTTTTTATTTCCACTTTTTTCTTTGTTTCAAAACAACAACAATGGCCTCTCTTGCCTTCGCATTCTCTCCGGCCGCCGGACGGGTGTTCGCAGCCAC
GGCGGCGAAGGGCGAAGGCAAGAGCGAAAAGGGCCTTTTTGATTGGATCCTAGGTGGCATGGAGAAAGATCATCTCCTTGAAACCGACCCTGTCCTTCAAAAGGTCGACG
GCAAGGGCAGCACCGCCGCCTCCAACGGCGCCAGGAAGAACTCCGTCCAACTCCCCCCCAAGAAAAACGGCGGCTTTGGCGGCCTTTTTGCCAAGAAAGACTGATAGCGC
CGCCGTGGATGCCTTTTCACTTACTTATATAATTTCTTTGTATTCAATACTCATGCCCCTTGTTGCCCTTTTGTTGCTTCTCTCTCTCATTACTATTTTTCTCATTATTG
TTGGTATTTGGTAATTGTTCCTCTTTTTTCTACTCACATAATGTTGGTTTTATTTCACATTTTAAGGATTGATAGCAATAGAGTGGAAATAGATAAATAAGAAACCAGAT
AGTCGCGACACAACTTTGGGATTGATTTACAAAATCATTCACCCAGATGTTTATCTTCTGAATTATTGATTTTGAGATGTAAAATCCAT
Protein sequenceShow/hide protein sequence
MASLAFAFSPAAGRVFAATAAKGEGKSEKGLFDWILGGMEKDHLLETDPVLQKVDGKGSTAASNGARKNSVQLPPKKNGGFGGLFAKKD