CuGenDBv2

Gene ID	Sed0014361
Organism	Sechium edule (Chayote v1)
Description	Epidermal patterning factor-like protein
Genome location	LG03:3321884..3322554
RNA-Seq Expression	Sed0014361
Synteny	Sed0014361
Gene Ontology terms	GO:0010052 - guard cell differentiation (biological process) GO:0005576 - extracellular region (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039455 - EPIDERMAL PATTERNING FACTOR-like protein

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004140931.1 protein EPIDERMAL PATTERNING FACTOR 2 [Cucumis sativus]

2.6e-28

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDA TR DHMSFNAED HRT++ SR Q+EK KEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

XP_008456675.1 PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]

5.9e-28

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDA  R DHMSFNAED HRTV++SR Q+EK KEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

XP_022134337.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Momordica charantia]

2.8e-30

87.34

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDAT+R +HMSFNAED HRTVDSS  QKE+AKEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

XP_022957958.1 protein EPIDERMAL PATTERNING FACTOR 1-like [Cucurbita moschata]

5.3e-29

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLD TTR DHMS+NAEDAHRT  S R ++EKAKEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

XP_038885051.1 protein EPIDERMAL PATTERNING FACTOR 2-like [Benincasa hispida]

6.9e-29

83.54

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        M G SLDATTR DHMSFNAED HR VD+SR ++EK +EV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KB66 Epidermal patterning factor-like protein

1.3e-28

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDA TR DHMSFNAED HRT++ SR Q+EK KEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

A0A1S3C3W6 Epidermal patterning factor-like protein

2.8e-28

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDA  R DHMSFNAED HRTV++SR Q+EK KEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

A0A5D3BXL8 Epidermal patterning factor-like protein

2.8e-28

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDA  R DHMSFNAED HRTV++SR Q+EK KEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

A0A6J1BZC6 Epidermal patterning factor-like protein

1.4e-30

87.34

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLDAT+R +HMSFNAED HRTVDSS  QKE+AKEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

A0A6J1H1R6 Epidermal patterning factor-like protein

2.6e-29

84.81

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Query:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        MIG SLD TTR DHMS+NAEDAHRT  S R ++EKAKEV GME YPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
Subjt:  MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

SwissProt top hits

e value

%identity

Alignment

C4B8C5 EPIDERMAL PATTERNING FACTOR-like protein 7

5.9e-07

63.64

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Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        +GSS+PDCS+ACGPC PCK V++S  CS +E+C
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Q8LC53 Protein EPIDERMAL PATTERNING FACTOR 2

4.2e-13

59.02

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Query:  RTVDSSRPQKEKAKEVD-----GMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        +  D  + Q    KE+       ME YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC
Subjt:  RTVDSSRPQKEKAKEVD-----GMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

Q8S8I4 Protein EPIDERMAL PATTERNING FACTOR 1

2.9e-06

40.62

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Query:  HMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAE
        H+  ++  +H  V  +   K + +  D ++    GS LPDCSHACG C PC+ VMVSF C+  E
Subjt:  HMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAE

Arabidopsis top hits

e value

%identity

Alignment

AT1G34245.1 Putative membrane lipoprotein

3.0e-14

59.02

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Query:  RTVDSSRPQKEKAKEVD-----GMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        +  D  + Q    KE+       ME YPTGSSLPDCS+ACG C PCKRVM+SF+CSVAESC
Subjt:  RTVDSSRPQKEKAKEVD-----GMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

AT1G71866.1 LOCATED IN: endomembrane system

4.2e-08

63.64

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Query:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC
        +GSS+PDCS+ACGPC PCK V++S  CS +E+C
Subjt:  TGSSLPDCSHACGPCFPCKRVMVSFKCSVAESC

AT2G20875.1 epidermal patterning factor 1

2.1e-07

40.62

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Query:  HMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAE
        H+  ++  +H  V  +   K + +  D ++    GS LPDCSHACG C PC+ VMVSF C+  E
Subjt:  HMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAE

Sequences

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CDS sequence

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ATGATTGGTATAAGCCTTGATGCAACAACTCGCTCGGATCACATGAGCTTTAATGCAGAAGATGCTCACAGAACAGTTGACAGTTCAAGGCCCCAGAAGGAAAAAGCTAA
AGAAGTAGATGGCATGGAGTCATACCCTACAGGCTCCAGCCTCCCAGACTGCTCCCATGCATGTGGACCATGTTTTCCATGCAAAAGGGTGATGGTGAGCTTCAAATGCT
CTGTTGCGGAGTCCTGTCTACAGATGCATGTGTAA

mRNA sequence

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Protein sequence

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MIGISLDATTRSDHMSFNAEDAHRTVDSSRPQKEKAKEVDGMESYPTGSSLPDCSHACGPCFPCKRVMVSFKCSVAESCLQMHV

Sed0014361 (gene) of Chayote v1 genome