CuGenDBv2

Gene ID	Sed0014393
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Genome location	LG08:36209326..36213796
RNA-Seq Expression	Sed0014393
Synteny	Sed0014393
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004146608.1 uncharacterized protein LOC101210942 [Cucumis sativus]

1.6e-41

86.49

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MA  DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LMLALAFSS+DSWLILHV+FLV+I ATLFLLLNWFLS+TGLVSVK+QMEELQLA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKSQDK EK+E
Subjt:  PKSQDKIEKSE

XP_008442704.1 PREDICTED: uncharacterized protein LOC103486495 [Cucumis melo]

1.4e-40

84.68

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MA  DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LMLALAFSS+DSWLILHV+FLV+I +TLFLLLNWFLS+TGLVSVK+QMEELQLA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKS+DK EK+E
Subjt:  PKSQDKIEKSE

XP_022954415.1 uncharacterized protein LOC111456676 [Cucurbita moschata]

3.6e-41

84.68

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MAG DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LML+LAFS++DSWLILHV+FLV+I ATLFLLLNWFLSETGLVSVK+QMEELQ++
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKSQDK EK+E
Subjt:  PKSQDKIEKSE

XP_022994498.1 uncharacterized protein LOC111490203 [Cucurbita maxima]

1.0e-40

83.78

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MAG DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LML+LAFS++DSWLILHV+FLV+I ATLFLLLNWFLSETGLVSVK+QMEELQ++
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKS+DK EK+E
Subjt:  PKSQDKIEKSE

XP_038876938.1 uncharacterized protein LOC120069298 [Benincasa hispida]

6.7e-40

83.78

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MA  +SGDGE+SSAQAVL+GALAPGVNGPTWTTLK TFLMLGLCL+LML LAFSS+DSWLILHV+FLV I  TLFLLLNWFLS+TGLVSVK+QMEEL LA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKSQDK EK+E
Subjt:  PKSQDKIEKSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LUL6 Uncharacterized protein

7.8e-42

86.49

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MA  DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LMLALAFSS+DSWLILHV+FLV+I ATLFLLLNWFLS+TGLVSVK+QMEELQLA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKSQDK EK+E
Subjt:  PKSQDKIEKSE

A0A1R3H4F3 Uncharacterized protein

4.7e-31

74.53

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        M  K +  GEISSAQAVL+GALAPGVNGPTW TLK TFLMLGLCL LML LAFSS+DS LILHV+FLVLI  TLFLLLNWFL +TGLVSV+ QM+E+ LA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDK
        PK   +
Subjt:  PKSQDK

A0A1S3B5U3 uncharacterized protein LOC103486495

6.6e-41

84.68

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MA  DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LMLALAFSS+DSWLILHV+FLV+I +TLFLLLNWFLS+TGLVSVK+QMEELQLA
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKS+DK EK+E
Subjt:  PKSQDKIEKSE

A0A6J1GSC6 uncharacterized protein LOC111456676

1.7e-41

84.68

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MAG DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LML+LAFS++DSWLILHV+FLV+I ATLFLLLNWFLSETGLVSVK+QMEELQ++
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKSQDK EK+E
Subjt:  PKSQDKIEKSE

A0A6J1K5C1 uncharacterized protein LOC111490203

5.0e-41

83.78

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Query:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA
        MAG DSGDGE+SSAQAVL+GALAPGVNGPTWTTLK  FLMLGLCL+LML+LAFS++DSWLILHV+FLV+I ATLFLLLNWFLSETGLVSVK+QMEELQ++
Subjt:  MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLA

Query:  PKSQDKIEKSE
        PKS+DK EK+E
Subjt:  PKSQDKIEKSE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G28250.1 unknown protein

2.4e-27

61.86

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Query:  EISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLAPKSQDK
        +ISS +AV +GALAPGVNGPTW TL+  FL+LGLCL  ML++AF+S  S L++HV FL++IA+TLF+LLNWFL++TGLV V++QM+EL L P  + K
Subjt:  EISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLAPKSQDK

Sequences

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CDS sequence

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ATGGCAGGCAAGGATTCGGGCGATGGAGAAATATCTTCCGCACAAGCAGTTTTGGTCGGAGCTTTGGCCCCTGGTGTCAACGGTCCTACTTGGACGACCTTGAAGTGTAC
GTTTCTGATGCTGGGTCTGTGTCTCCTTCTCATGCTTGCTCTTGCATTCTCTTCCACCGATTCTTGGCTGATTCTTCACGTTTCCTTCTTAGTGCTTATAGCCGCCACCC
TTTTCTTGCTTCTTAACTGGTTTCTTTCCGAAACTGGCTTGGTTTCAGTAAAGAGCCAAATGGAAGAATTGCAGTTGGCACCAAAGAGTCAAGATAAAATCGAAAAGAGC
GAATGA

mRNA sequence

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TAGTTATCCAATTCAACCCAATGTATGGAATTGAGTTGGCGTTGATCGATTCGAGTTCTTTGAACCACTGAATGTGATTGTACCTAAAAACCATATTGAATGTACTGAAA
CAAAACCATTTACAATAAACTTAAATAATTATTTAACAAAGTCACCATTTTTTTTTGCAGTCCATAGTGTGTGCAATGGCAGGCAAGGATTCGGGCGATGGAGAAATATC
TTCCGCACAAGCAGTTTTGGTCGGAGCTTTGGCCCCTGGTGTCAACGGTCCTACTTGGACGACCTTGAAGTGTACGTTTCTGATGCTGGGTCTGTGTCTCCTTCTCATGC
TTGCTCTTGCATTCTCTTCCACCGATTCTTGGCTGATTCTTCACGTTTCCTTCTTAGTGCTTATAGCCGCCACCCTTTTCTTGCTTCTTAACTGGTTTCTTTCCGAAACT
GGCTTGGTTTCAGTAAAGAGCCAAATGGAAGAATTGCAGTTGGCACCAAAGAGTCAAGATAAAATCGAAAAGAGCGAATGATAAGAACTAATTTTATAGTATTATAAAAC
AAGACATCAAATTGGGTGAAATTTTCCTTAGGAGACTCGAACAAACGGATCGAAACAGAAACCGCGATACATTATCGAGTAGAAACACGAGCTGGTTGATACTGATAGAT
CTAATGAATCAATCTTCCATTATTTCAAGAGGGGGTGAAAGGAAACTTATTTGCAGAAGAAACAGTTGAAATGGTAACAACTTCATTCATGCTTTGATTCTTCCTCCTTG
TGCTCTCCTTTCTTCTGCTTGATGTAACAGAAGCAAGAACAGCATGGTAACTGTAAAAGGAACTTCATTTCTTGTTGTGTTTGATGTGGAAATTAGAAGAGCAAGAGTTT
TTATATATGCAGAGTTAGAGCTTTATTCTTTTGGTGTCTTTATTCCTTATTTTTCTTGGGATGCCATTACCTTGTTGATTACAGATAAGAAGATGCTTATTCTAGCTTCA
CCACCTCCTAAAACATGAGGAATCTGAGATTATATTGTTGATGGGTCATTTGCAGCTTTTGTCTTAAAGTTTTCCTTGTGATTTTTCTTTCTTCTATTTTCCTTTCTAAA
CTTGCTGTGGTAAAGGGGTGTGGTGAAGGATTTGTTTGGTTAAGAACCATGGAAAGGCATAAGGGGCTGTTATTATGAACTAATGATTATTTGTTCAA

Protein sequence

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MAGKDSGDGEISSAQAVLVGALAPGVNGPTWTTLKCTFLMLGLCLLLMLALAFSSTDSWLILHVSFLVLIAATLFLLLNWFLSETGLVSVKSQMEELQLAPKSQDKIEKS
E

Sed0014393 (gene) of Chayote v1 genome