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Sed0014394 (gene) of Chayote v1 genome

Gene IDSed0014394
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG11:21203577..21204316
RNA-Seq ExpressionSed0014394
SyntenySed0014394
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064730.1 putative transmembrane protein [Cucumis melo var. makuwa]5.2e-5964.06Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK------------------KGEETEDGAKELPLPPK
        MVR FPTD+N LI+PAI L L A GMAA+IAMIT LCGV SRRRS  SEASS TA  N NK EE                   +  E E   KELPLPPK
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK------------------KGEETEDGAKELPLPPK

Query:  LQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP---
        +QQV +S PP++ILKSASERK++ ++SMS+KVPRSLSVV+ HL+EGRQ+RKEK+K E+SIWTKTIILGEKCKVS+EEDG+IYEGKGKK++AYHPRAP   
Subjt:  LQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP---

Query:  -MSISRGGSAIDDEALP
         +S+SR  SA + EALP
Subjt:  -MSISRGGSAIDDEALP

KAG6585751.1 hypothetical protein SDJN03_18484, partial [Cucurbita argyrosperma subsp. sororia]2.6e-4258.5Show/hide
Query:  ALGMAASIAMITMLCGV--WSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPLPPKLQQVENSVPPSKILKSA
        A GM A+IAMIT LCGV   SRR SP SEASS TA   D KQ+                        G ETE+  KELPLPPK+QQV +  PPSKI KSA
Subjt:  ALGMAASIAMITMLCGV--WSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPLPPKLQQVENSVPPSKILKSA

Query:  SERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISRGGSAIDDEALP
        SER++  + S++MKVPRS SV +  LEEG  +RKEK+  EE IW KTIILGEKC+VS+EEDGVIYEGKGK++SAYHPR+P    +SISR  SAID EALP
Subjt:  SERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISRGGSAIDDEALP

KAG6598610.1 hypothetical protein SDJN03_08388, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5763.38Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK-------KGEET-----EDGAKELPLPPKLQQVEN
        MVR FPTDEN LI+PAI LSL A GMAA+IAMIT LCG  SR+    SEASS TAA  DNK +E         G ET     E G KELPLPPK+QQ+ +
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK-------KGEET-----EDGAKELPLPPKLQQVEN

Query:  SVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISR
        + PP++I KSASERK++ +KSM++ VPRSLSV + +L++GR K+K+K+K E+SIWTKTIILGEKCKV++EEDG+IYEGKGKK+SAYHPRAP     S+SR
Subjt:  SVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISR

Query:  GGSAIDDEALPKP
         GSAID EALP P
Subjt:  GGSAIDDEALPKP

KGN47811.2 hypothetical protein Csa_018925 [Cucumis sativus]2.4e-5663.08Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEE---------------KKGE-ETEDGAKELPLPPKLQ
        MVR FPTD+N LI+PAI L L A GMAA+I+MIT LCGV SRRRS  SE SS  AA  DNK +E                 GE E E   KELPLPPK+Q
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEE---------------KKGE-ETEDGAKELPLPPKLQ

Query:  QVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----M
        QV ++ PPS+I KSASERK++ ++SMS+KVPRSLSVV+ HL+EGRQ+RKE++K E+SIWTKTIILGEKCKVS+EEDG+IYEGKGKK++AYHPRAP    +
Subjt:  QVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----M

Query:  SISRGGSAIDDEAL
        S+SR  SA++ EAL
Subjt:  SISRGGSAIDDEAL

XP_023002698.1 uncharacterized protein LOC111496482 [Cucurbita maxima]1.5e-5058.18Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPL
        MV  FPTDEN LI+PAI L+L A GM  +IAMIT LCGV SRR    SEASS TA   D KQ+                        G ETE+  KELPL
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPL

Query:  PPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP
        PPK+QQV +  PPS+I KSASER++  +  M+M+VPRS SV +  LEEG ++RKEK+K EE IW KTIILGEKC+VS+EEDGVIYEGKGK++SAYHPR+P
Subjt:  PPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP

Query:  ----MSISRGGSAIDDEALP
            +SISR  SAID EALP
Subjt:  ----MSISRGGSAIDDEALP

TrEMBL top hitse value%identityAlignment
A0A0A0KD46 Uncharacterized protein2.1e-4562.3Show/hide
Query:  MITMLCGVWSRRRSPESEASSATAAGNDNKQEE---------------KKGE-ETEDGAKELPLPPKLQQVENSVPPSKILKSASERKISQVKSMSMKVP
        MIT LCGV SRRRS  SE SS  AA  DNK +E                 GE E E   KELPLPPK+QQV ++ PPS+I KSASERK++ ++SMS+KVP
Subjt:  MITMLCGVWSRRRSPESEASSATAAGNDNKQEE---------------KKGE-ETEDGAKELPLPPKLQQVENSVPPSKILKSASERKISQVKSMSMKVP

Query:  RSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISRGGSAIDDEAL
        RSLSVV+ HL+EGRQ+RKE++K E+SIWTKTIILGEKCKVS+EEDG+IYEGKGKK++AYHPRAP    +S+SR  SA++ EAL
Subjt:  RSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP----MSISRGGSAIDDEAL

A0A5A7VC31 Putative transmembrane protein2.5e-5964.06Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK------------------KGEETEDGAKELPLPPK
        MVR FPTD+N LI+PAI L L A GMAA+IAMIT LCGV SRRRS  SEASS TA  N NK EE                   +  E E   KELPLPPK
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEK------------------KGEETEDGAKELPLPPK

Query:  LQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP---
        +QQV +S PP++ILKSASERK++ ++SMS+KVPRSLSVV+ HL+EGRQ+RKEK+K E+SIWTKTIILGEKCKVS+EEDG+IYEGKGKK++AYHPRAP   
Subjt:  LQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP---

Query:  -MSISRGGSAIDDEALP
         +S+SR  SA + EALP
Subjt:  -MSISRGGSAIDDEALP

A0A6A1WQ24 Uncharacterized protein4.2e-3042.48Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCG--VWSRRRSP-----------ESEASSATAA------------GNDNKQEEKKG--EETEDG
        MVRR PT+E  L +P +  SL A+G+AA+IA IT LCG  +W R   P           + +AS+ TA                 K  E +G   + E  
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCG--VWSRRRSP-----------ESEASSATAA------------GNDNKQEEKKG--EETEDG

Query:  AKELPLPPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSA
        A+ELPLPP +  +  S    +I KS+S+R ++  K+++MK+PRSLS+ +   +E   +RK+ L +E+SIW KTIILGEKCKV +E+D VIY+GKGK++S 
Subjt:  AKELPLPPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSA

Query:  YHPRAP--MSISRGGSAIDDEALPKP
        YHP+ P  +S+SR GS  + EA P P
Subjt:  YHPRAP--MSISRGGSAIDDEALPKP

A0A6J1KUB9 uncharacterized protein LOC1114964827.3e-5158.18Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPL
        MV  FPTDEN LI+PAI L+L A GM  +IAMIT LCGV SRR    SEASS TA   D KQ+                        G ETE+  KELPL
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQE---------------------EKKGEETEDGAKELPL

Query:  PPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP
        PPK+QQV +  PPS+I KSASER++  +  M+M+VPRS SV +  LEEG ++RKEK+K EE IW KTIILGEKC+VS+EEDGVIYEGKGK++SAYHPR+P
Subjt:  PPKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAP

Query:  ----MSISRGGSAIDDEALP
            +SISR  SAID EALP
Subjt:  ----MSISRGGSAIDDEALP

A0A7N2KRH9 Uncharacterized protein6.0e-2944.09Show/hide
Query:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRS-----------PESEASSATAAGNDNKQEEKKGE--ETEDGA-------KELPLP
        M RR P+DEN LI+P    SL A+GM A+IAMIT LCGV SR++S            E+   S +A+        K  E  E ED +       KELPLP
Subjt:  MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRS-----------PESEASSATAAGNDNKQEEKKGE--ETEDGA-------KELPLP

Query:  PKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVK----THLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEED-GVIYEGKGKKVSAYH
        P ++ ++ S   + I KS+SER++    S+SMK+PRSLS  K       EE  Q++K  L +E+++W KTIILGEKCKV  E+D  VIY+GKG ++SAYH
Subjt:  PKLQQVENSVPPSKILKSASERKISQVKSMSMKVPRSLSVVK----THLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEED-GVIYEGKGKKVSAYH

Query:  PRAP--MSISRGGSAIDDEA
        P+ P   S+SR  S  D ++
Subjt:  PRAP--MSISRGGSAIDDEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26114.1 unknown protein3.5e-0540.74Show/hide
Query:  VVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVS---AYHPR--APMSISRGGSAIDDEALP
        V+K   EE +  RK+KL A+ SI    IILGE+C+V + E+G   E + ++++    Y PR  + +SISR  S ID  A+P
Subjt:  VVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVS---AYHPR--APMSISRGGSAIDDEALP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAGAAGATTTCCGACAGATGAGAACCGGTTAATTAACCCGGCAATCTGTCTGTCCCTTTTTGCATTGGGAATGGCAGCTTCCATCGCCATGATCACGATGCTATG
CGGCGTGTGGTCCCGACGAAGATCGCCGGAGTCGGAAGCTTCATCGGCCACCGCAGCCGGGAACGACAATAAACAAGAGGAAAAGAAAGGAGAGGAAACAGAAGATGGAG
CGAAGGAACTTCCCCTGCCACCGAAACTGCAGCAAGTGGAGAACTCGGTCCCGCCGAGCAAGATCTTAAAATCGGCGTCGGAGAGGAAAATTAGCCAAGTGAAAAGTATG
AGCATGAAAGTTCCGAGAAGCCTGTCGGTTGTGAAAACACATTTGGAGGAAGGGAGGCAGAAGAGAAAAGAGAAGTTGAAAGCGGAAGAATCGATTTGGACGAAGACAAT
AATATTAGGGGAGAAATGCAAAGTTTCAGAGGAAGAAGATGGGGTTATTTACGAAGGAAAAGGGAAGAAGGTTTCGGCTTATCATCCCAGAGCTCCCATGTCCATTTCCA
GGGGAGGTTCCGCCATTGATGATGAAGCTCTGCCAAAACCATAG
mRNA sequenceShow/hide mRNA sequence
TCTTTTTCTACTTCTTCTCATTCCTGATCCAATTTCCTTGCAGAAAAGAAAACATTTTTTGCCACTTTTTTTGTTAAACAGAGCAATCATAGAAATGAACAGATGAAAAC
AGAGCATCCATGTCCAAGTCATGGTGAGAAGATTTCCGACAGATGAGAACCGGTTAATTAACCCGGCAATCTGTCTGTCCCTTTTTGCATTGGGAATGGCAGCTTCCATC
GCCATGATCACGATGCTATGCGGCGTGTGGTCCCGACGAAGATCGCCGGAGTCGGAAGCTTCATCGGCCACCGCAGCCGGGAACGACAATAAACAAGAGGAAAAGAAAGG
AGAGGAAACAGAAGATGGAGCGAAGGAACTTCCCCTGCCACCGAAACTGCAGCAAGTGGAGAACTCGGTCCCGCCGAGCAAGATCTTAAAATCGGCGTCGGAGAGGAAAA
TTAGCCAAGTGAAAAGTATGAGCATGAAAGTTCCGAGAAGCCTGTCGGTTGTGAAAACACATTTGGAGGAAGGGAGGCAGAAGAGAAAAGAGAAGTTGAAAGCGGAAGAA
TCGATTTGGACGAAGACAATAATATTAGGGGAGAAATGCAAAGTTTCAGAGGAAGAAGATGGGGTTATTTACGAAGGAAAAGGGAAGAAGGTTTCGGCTTATCATCCCAG
AGCTCCCATGTCCATTTCCAGGGGAGGTTCCGCCATTGATGATGAAGCTCTGCCAAAACCATAGACCCACATCAGAATTG
Protein sequenceShow/hide protein sequence
MVRRFPTDENRLINPAICLSLFALGMAASIAMITMLCGVWSRRRSPESEASSATAAGNDNKQEEKKGEETEDGAKELPLPPKLQQVENSVPPSKILKSASERKISQVKSM
SMKVPRSLSVVKTHLEEGRQKRKEKLKAEESIWTKTIILGEKCKVSEEEDGVIYEGKGKKVSAYHPRAPMSISRGGSAIDDEALPKP