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Sed0014477 (gene) of Chayote v1 genome

Gene IDSed0014477
OrganismSechium edule (Chayote v1)
DescriptionEarly nodulin-20-like
Genome locationLG12:10954094..10954603
RNA-Seq ExpressionSed0014477
SyntenySed0014477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442897.1 PREDICTED: uncharacterized protein LOC103486660 [Cucumis melo]1.2e-5179.39Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG
        MDETS L+PDPP SNLRRRNSITVPV VPS+LNL+AA  TK S G  ASP  PLAFELVPIKSS   SSPSL+YTSLRDILPS   A+SSP AASAANSG
Subjt:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        YEISIRNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACLSF NL IISSI   FDRIFRV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

XP_011652026.1 uncharacterized protein LOC105434978 [Cucumis sativus]8.4e-5076.97Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG
        MD+TS L+PD P SNLRRRNSITVPV VPS+LNL+AA  TK S G  ASP  PLAFELVPIKSS   SSPSL+YTSL+DILPS   A+SSP A SAANSG
Subjt:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        YEISIRNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACLSF NL IISSI   FDRIFRV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

XP_022957964.1 uncharacterized protein LOC111459312 [Cucurbita moschata]4.9e-5075.62Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI
        MD+ S  +P PPP NLRRRNSI VP VVPS+LNL A A TK SGG AASPPLAFEL PIKSSS  SL+YTSLRDILPS   + SSP AASAANSG+EISI
Subjt:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI

Query:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        RNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACL F NL IISS+ K  DRIFRV
Subjt:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

XP_023005655.1 uncharacterized protein LOC111498593 [Cucurbita maxima]1.4e-4974.38Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI
        MD+ S  +P PPP NLRRRNSI VP VVPS+LNL A + TK SGG AASPPLAFEL P+KSSS  SL+YTSLRDILPS   + SSP AASAANSG+EISI
Subjt:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI

Query:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        RNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACL F NL IISS+ K  DRIFRV
Subjt:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

XP_023539526.1 uncharacterized protein LOC111800166 [Cucurbita pepo subsp. pepo]3.4e-5176.25Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI
        MD+ S L+P PPP NLRRRNSI VP VVPS+LNL A A TK SGG AASPPLAFEL PIKSSS  SL+YTSLRDILPS + + SSP AASAANSG+EISI
Subjt:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI

Query:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        RNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACL F NL IISS+ K  DRIFRV
Subjt:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

TrEMBL top hitse value%identityAlignment
A0A0A0LE45 Uncharacterized protein4.1e-5076.97Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG
        MD+TS L+PD P SNLRRRNSITVPV VPS+LNL+AA  TK S G  ASP  PLAFELVPIKSS   SSPSL+YTSL+DILPS   A+SSP A SAANSG
Subjt:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        YEISIRNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACLSF NL IISSI   FDRIFRV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

A0A1S3B6B1 uncharacterized protein LOC1034866605.7e-5279.39Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG
        MDETS L+PDPP SNLRRRNSITVPV VPS+LNL+AA  TK S G  ASP  PLAFELVPIKSS   SSPSL+YTSLRDILPS   A+SSP AASAANSG
Subjt:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        YEISIRNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACLSF NL IISSI   FDRIFRV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

A0A5A7TKK1 Putative COPII coat assembly protein SEC165.7e-5279.39Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG
        MDETS L+PDPP SNLRRRNSITVPV VPS+LNL+AA  TK S G  ASP  PLAFELVPIKSS   SSPSL+YTSLRDILPS   A+SSP AASAANSG
Subjt:  MDETSTLQPDPPPSNLRRRNSITVPV-VPSELNLIAAAMTKYSGGGAASP--PLAFELVPIKSS---SSPSLSYTSLRDILPSAAAATSSPVAASAANSG

Query:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        YEISIRNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACLSF NL IISSI   FDRIFRV
Subjt:  YEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

A0A6J1H3M0 uncharacterized protein LOC1114593122.4e-5075.62Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI
        MD+ S  +P PPP NLRRRNSI VP VVPS+LNL A A TK SGG AASPPLAFEL PIKSSS  SL+YTSLRDILPS   + SSP AASAANSG+EISI
Subjt:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI

Query:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        RNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACL F NL IISS+ K  DRIFRV
Subjt:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

A0A6J1KY03 uncharacterized protein LOC1114985936.9e-5074.38Show/hide
Query:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI
        MD+ S  +P PPP NLRRRNSI VP VVPS+LNL A + TK SGG AASPPLAFEL P+KSSS  SL+YTSLRDILPS   + SSP AASAANSG+EISI
Subjt:  MDETSTLQPDPPPSNLRRRNSITVP-VVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISI

Query:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV
        RNRLVKQAAWAYLQPMSSSPGSS PH L RI+  FSACL F NL IISS+ K  DRIFRV
Subjt:  RNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52520.1 unknown protein1.8e-1346.67Show/hide
Query:  GAASPPLAFELVPI-KSSSSPSLSYTSLRDILPSAAAATSSPV---AASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSF
        GA S  L  ELV + KSS  P   YTSL+DILPS++    SP    A ++A SG  I+IRNRLVKQAA +YLQP + +P SS P FL R+  SF      
Subjt:  GAASPPLAFELVPI-KSSSSPSLSYTSLRDILPSAAAATSSPV---AASAANSGYEISIRNRLVKQAAWAYLQPMSSSPGSSAPHFLLRIFRSFSACLSF

Query:  FNLRIISSIAKGFDRIFRVF
          +R++S+    FD + R+F
Subjt:  FNLRIISSIAKGFDRIFRVF

AT5G06280.1 unknown protein4.5e-0935.33Show/hide
Query:  PPSNLRRRNSI------TVPVVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPS---------AAAATSSPVAASAANSGYE
        P + LRR  SI      T P VP ++              A++PP +F+   I    S  ++YTSLRDI+ S         +   + SPV ++AA    +
Subjt:  PPSNLRRRNSI------TVPVVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPS---------AAAATSSPVAASAANSGYE

Query:  ISIRNRLVKQAAWAYLQP--MSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRVFR
        ISIRNRLVKQAA +YLQP  ++SS  S+   F  R++   SA   F        + + FD IF+ FR
Subjt:  ISIRNRLVKQAAWAYLQP--MSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRVFR

AT5G06280.3 unknown protein4.5e-0935.33Show/hide
Query:  PPSNLRRRNSI------TVPVVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPS---------AAAATSSPVAASAANSGYE
        P + LRR  SI      T P VP ++              A++PP +F+   I    S  ++YTSLRDI+ S         +   + SPV ++AA    +
Subjt:  PPSNLRRRNSI------TVPVVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPS---------AAAATSSPVAASAANSGYE

Query:  ISIRNRLVKQAAWAYLQP--MSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRVFR
        ISIRNRLVKQAA +YLQP  ++SS  S+   F  R++   SA   F        + + FD IF+ FR
Subjt:  ISIRNRLVKQAAWAYLQP--MSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRVFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAGACCTCCACTCTACAACCAGACCCACCACCGTCGAATCTCCGCCGCAGAAACTCCATTACGGTGCCCGTCGTGCCATCCGAACTAAACCTTATCGCCGCCGC
CATGACCAAGTACTCCGGTGGCGGAGCTGCATCGCCGCCCCTGGCCTTCGAGCTCGTCCCGATCAAATCCTCCTCCTCCCCCTCCCTTTCCTATACTTCTCTGAGAGACA
TTCTTCCATCCGCGGCCGCCGCCACCAGCTCCCCCGTCGCCGCCTCTGCTGCAAATTCCGGCTACGAGATCTCCATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCG
TATCTTCAGCCCATGTCCTCCTCTCCCGGCTCATCAGCACCCCATTTCCTCCTCCGTATCTTCCGCAGCTTTTCAGCTTGTCTCAGCTTCTTCAACCTCCGCATAATTTC
CTCCATAGCAAAGGGTTTTGATCGGATTTTTCGCGTGTTCAGGGGTAATACAAATCAGCTCTTCCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGAGACCTCCACTCTACAACCAGACCCACCACCGTCGAATCTCCGCCGCAGAAACTCCATTACGGTGCCCGTCGTGCCATCCGAACTAAACCTTATCGCCGCCGC
CATGACCAAGTACTCCGGTGGCGGAGCTGCATCGCCGCCCCTGGCCTTCGAGCTCGTCCCGATCAAATCCTCCTCCTCCCCCTCCCTTTCCTATACTTCTCTGAGAGACA
TTCTTCCATCCGCGGCCGCCGCCACCAGCTCCCCCGTCGCCGCCTCTGCTGCAAATTCCGGCTACGAGATCTCCATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCG
TATCTTCAGCCCATGTCCTCCTCTCCCGGCTCATCAGCACCCCATTTCCTCCTCCGTATCTTCCGCAGCTTTTCAGCTTGTCTCAGCTTCTTCAACCTCCGCATAATTTC
CTCCATAGCAAAGGGTTTTGATCGGATTTTTCGCGTGTTCAGGGGTAATACAAATCAGCTCTTCCAATAA
Protein sequenceShow/hide protein sequence
MDETSTLQPDPPPSNLRRRNSITVPVVPSELNLIAAAMTKYSGGGAASPPLAFELVPIKSSSSPSLSYTSLRDILPSAAAATSSPVAASAANSGYEISIRNRLVKQAAWA
YLQPMSSSPGSSAPHFLLRIFRSFSACLSFFNLRIISSIAKGFDRIFRVFRGNTNQLFQ