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Sed0014484 (gene) of Chayote v1 genome

Gene IDSed0014484
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand
Genome locationLG11:24037410..24037688
RNA-Seq ExpressionSed0014484
SyntenySed0014484
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]1.2e-2973.63Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        MGNSKSK+YKRVLVP SE QL ++F +HD+DGDG LTKEELK+AFEYLGSRFS+FR +EALRAAD +GDG I MDEM KLI+YA++ KYT+
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

KAG6585662.1 hypothetical protein SDJN03_18395, partial [Cucurbita argyrosperma subsp. sororia]1.9e-3280.43Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC
        MGNSKSK+YKRVLVPL+E QL  IF SHD+DGDGKLTKEELK+AF YLGSRFSSFRA EALRAAD DGDGTI M EM KLIQY ++ KYTLC
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]9.6e-3279.35Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC
        MGNSKSK+YKRVLVP SE QL S+F +HD DGDGKLTKEELK+AF+YLGSRFSSFR +EALRAAD DGDG I M EM KLIQYA+S KYTLC
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]8.9e-3073.91Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC
        MGN+KS +YKRVLVP +E QL +IF SHD+DGDGKL+KEELK+AF YLGSRFSSFR KEALRAAD +GDG I MDEM KLI+Y +  KYTLC
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-3279.35Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC
        MGNSKSK+YKRVLVP SE QL S+F +HD DGDGKLTKEELK+AF+YLGSRFSSFR +EALRAAD+DGDG I M EM KLIQYA+S KYTLC
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC

TrEMBL top hitse value%identityAlignment
A0A0A0L4V0 Uncharacterized protein1.1e-1754.22Show/hide
Query:  YKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        YKR  VP S  QL  IF+ HD DGDG+L++ ELK AFE LGS +S FRA+++L+AAD DGDG + +DE+ +L+ YA  C+Y +
Subjt:  YKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

A0A0A0LRB6 Uncharacterized protein2.8e-2972.53Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        MGNSKSK+YKRVLVP SE QL ++F +HD+DGDG LTKEELK+AFEYLGSRF +FR +EALRAAD +GDG I MDEM KLI+YA++ KYT+
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

A0A2N9FYQ0 Uncharacterized protein5.3e-2054.02Show/hide
Query:  KSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        K  S+KR  +P +E QL++IF SHD DGDGKL+++E+KKAF+YLGSR+ ++RA +A+  AD D DG I  +E++KL+QYA  C YT+
Subjt:  KSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein5.7e-3073.63Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        MGNSKSK+YKRVLVP SE QL ++F +HD+DGDG LTKEELK+AFEYLGSRFS+FR +EALRAAD +GDG I MDEM KLI+YA++ KYT+
Subjt:  MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

A0A7N2KRS3 Uncharacterized protein2.6e-1954.02Show/hide
Query:  KSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL
        K+ ++KR  VP +E QL++IF SHD DGDGKL+++ELK AF+YLGSR+ ++R  +ALR AD + DG I  DE++KL++YA  C YT+
Subjt:  KSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTL

SwissProt top hitse value%identityAlignment
P24044 Calmodulin3.2e-0635.38Show/hide
Query:  SEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI
        +E +L+  F   D+DGDG ++ +EL+     LG + ++    E +R AD+DGDG I  +E  K++
Subjt:  SEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI

P62203 Calmodulin3.2e-0635.38Show/hide
Query:  SEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI
        +E +L+  F   D+DGDG ++ +EL+     LG + ++    E +R AD+DGDG I  +E  K++
Subjt:  SEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI

Q9S9V0 Calcium-dependent protein kinase 312.5e-0639.24Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDE
        M   K  + K +   LSE +   L ++F + D D  G +T EELK     LGS  S    ++ + AADVDG+GTI +DE
Subjt:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDE

Q9SRE7 Calcium-binding protein CML392.5e-0638.71Show/hide
Query:  LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ
        L ++F   D + DG+++ EELKK+F+ LG + S   A+ A++ +D+DGDG + ++E   LI+
Subjt:  LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ

Q9ZSA2 Calcium-dependent protein kinase 215.5e-0641.33Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTI
        M   K  + K +   LSE +   L ++F + D D  G +T EELK     LGSR S    K+ + AADVDG+GTI
Subjt:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTI

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein1.7e-0738.71Show/hide
Query:  LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ
        L ++F   D + DG+++ EELKK+F+ LG + S   A+ A++ +D+DGDG + ++E   LI+
Subjt:  LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ

AT3G03410.1 EF hand calcium-binding protein family3.9e-0740.62Show/hide
Query:  EGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI
        E  L  +F+  D DGDGK+   E       LG +F+   + E +RAADVDGDG +  DE   L+
Subjt:  EGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLI

AT4G04695.1 calcium-dependent protein kinase 311.7e-0739.24Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDE
        M   K  + K +   LSE +   L ++F + D D  G +T EELK     LGS  S    ++ + AADVDG+GTI +DE
Subjt:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDE

AT4G04720.1 calcium-dependent protein kinase 213.9e-0741.33Show/hide
Query:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTI
        M   K  + K +   LSE +   L ++F + D D  G +T EELK     LGSR S    K+ + AADVDG+GTI
Subjt:  MGNSKSKSYKRVLVPLSEGQ---LVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTI

AT5G42380.1 calmodulin like 375.1e-0737.31Show/hide
Query:  LSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ
        L+  +L ++F   D + DGK++ EEL+     LG   SS   +E ++ +DVDGDG I  +E  KL++
Subjt:  LSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAATTCAAAAAGTAAGAGTTATAAACGAGTCCTGGTTCCATTATCAGAGGGGCAACTGGTCAGCATTTTCATGAGCCACGATCAAGACGGGGACGGGAAACTGAC
GAAGGAGGAGCTAAAGAAAGCGTTCGAGTATCTGGGCTCGCGTTTCAGCTCCTTTAGAGCTAAAGAAGCTCTACGCGCTGCTGATGTCGACGGTGACGGTACCATCAGAA
TGGATGAGATGAGAAAGCTAATTCAATATGCCCAAAGTTGCAAATATACTCTTTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAATTCAAAAAGTAAGAGTTATAAACGAGTCCTGGTTCCATTATCAGAGGGGCAACTGGTCAGCATTTTCATGAGCCACGATCAAGACGGGGACGGGAAACTGAC
GAAGGAGGAGCTAAAGAAAGCGTTCGAGTATCTGGGCTCGCGTTTCAGCTCCTTTAGAGCTAAAGAAGCTCTACGCGCTGCTGATGTCGACGGTGACGGTACCATCAGAA
TGGATGAGATGAGAAAGCTAATTCAATATGCCCAAAGTTGCAAATATACTCTTTGTTAA
Protein sequenceShow/hide protein sequence
MGNSKSKSYKRVLVPLSEGQLVSIFMSHDQDGDGKLTKEELKKAFEYLGSRFSSFRAKEALRAADVDGDGTIRMDEMRKLIQYAQSCKYTLC