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Sed0014487 (gene) of Chayote v1 genome

Gene IDSed0014487
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function, DUF584
Genome locationLG07:42193407..42195848
RNA-Seq ExpressionSed0014487
SyntenySed0014487
Gene Ontology termsNA
InterPro domainsIPR007608 - Senescence regulator S40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592046.1 hypothetical protein SDJN03_14392, partial [Cucurbita argyrosperma subsp. sororia]3.6e-4058.72Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG
        M GG  G  RQS ALWRSFRNGDF EEDVW VL++KS T SK+SD S  F+DS + ESA                     A+I S+SAPRSIP  F+PNG
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG

Query:  IRNERRFGSERDESSSDGGDSD-GVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
         +N R F SE D+S SDG  SD G  D+EGFD R PPHELIAKR AR+QISSFSV EG+GRTLKGRDL +++
Subjt:  IRNERRFGSERDESSSDGGDSD-GVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

KAG7024924.1 hypothetical protein SDJN02_13744, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-4058.72Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG
        M GG  G  RQS ALWRSFRNGDF EEDVW VL++KS T SK+SD S  F+DS + ESA                     A+I S+SAPRSIP  F+PNG
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG

Query:  IRNERRFGSERDESSSDGGDSD-GVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
         +N R F SE D+S SDG  SD G  D+EGFD R PPHELIAKR AR+QISSFSV EG+GRTLKGRDL +++
Subjt:  IRNERRFGSERDESSSDGGDSD-GVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

XP_022936189.1 uncharacterized protein LOC111442861 [Cucurbita moschata]1.9e-4160.47Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG
        M GG  G  RQS ALWRSFRNGDF EEDVW VL++KS T SK+SD S  F+DS + ESA                     A+I S+SAPRSIP  F+PNG
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG

Query:  IRNERRFGSERDESSSDGGDSDGVG-DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        I+N R F SE D+S SDG  SDG   DEEGFD R PPHELIAKR AR+QISSFSV EG+GRTLKGRDL R++
Subjt:  IRNERRFGSERDESSSDGGDSDGVG-DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

XP_022941010.1 uncharacterized protein LOC111446424 [Cucurbita moschata]3.7e-3757.93Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF
        M GGE G R QS ALWRSFRNGDF EEDVWNVLE+KS T S SSD  + FADSS+ ES               ARI  KSAPRSIP  F+PNG     +F
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF

Query:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
          + D+  +D  + +   +EEGF+ R PPHELIAKRL R+QISSFSV+EGVGRTLKGRDL +++
Subjt:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

XP_023536166.1 uncharacterized protein LOC111797411 [Cucurbita pepo subsp. pepo]3.9e-3958.14Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG
        M GG  G  RQS  LWRSFRNGDF EEDVW VL++KS   SK+SD S  F+DSS+ E+A                     A+I S+SAPRSIP  F+PNG
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG

Query:  IRNERRFGSERDESSSDGGDSDG-VGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
          N R F SE D+S SDG  SDG   DEEGFD R PPHELIAKR AR+QISSFSV EG+GRTLKGRDL +++
Subjt:  IRNERRFGSERDESSSDGGDSDG-VGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

TrEMBL top hitse value%identityAlignment
A0A0A0K3A6 Uncharacterized protein1.1e-2347.67Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESACARIGSKSAPR----------SIPPGFRPNGIRNERRFGSE
        MDGG T     + ALWRSFRNGDF EEDVWNVL +KS T   +S HS    DSS+ ES      S+  PR          SIP   +    +N R     
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESACARIGSKSAPR----------SIPPGFRPNGIRNERRFGSE

Query:  RDESSSDGGDSDGVG-----------DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
         DE   + G  +G G           +EEG   R PPHELIAKRLAR+QISSFSV EG GRTLKGRDL +++
Subjt:  RDESSSDGGDSDGVG-----------DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

A0A6J1CEH3 uncharacterized protein LOC1110104825.2e-3757.14Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTP-SKSSDHSDSFADSSVFESACA--------------------RIGSKSAPRSIPPGFRPN
        M+GG  G  RQS ALWRSFRNGDF EEDVW+VL++KSTT  SKSSD S  F DSS+  S  A                    +I  +SAPRSIP  F PN
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTP-SKSSDHSDSFADSSVFESACA--------------------RIGSKSAPRSIPPGFRPN

Query:  GIRNERRFGSERDESSSDGGDSDGVG---DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        G +N R+   E D+    GGD DG     DEEGFD R PPHELIAKRLAR+QISSFSV EGVGRTLKGRDL +++
Subjt:  GIRNERRFGSERDESSSDGGDSDGVG---DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

A0A6J1F7L6 uncharacterized protein LOC1114428619.2e-4260.47Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG
        M GG  G  RQS ALWRSFRNGDF EEDVW VL++KS T SK+SD S  F+DS + ESA                     A+I S+SAPRSIP  F+PNG
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC--------------------ARIGSKSAPRSIPPGFRPNG

Query:  IRNERRFGSERDESSSDGGDSDGVG-DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        I+N R F SE D+S SDG  SDG   DEEGFD R PPHELIAKR AR+QISSFSV EG+GRTLKGRDL R++
Subjt:  IRNERRFGSERDESSSDGGDSDGVG-DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

A0A6J1FSC1 uncharacterized protein LOC1114464241.8e-3757.93Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF
        M GGE G R QS ALWRSFRNGDF EEDVWNVLE+KS T S SSD  + FADSS+ ES               ARI  KSAPRSIP  F+PNG     +F
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF

Query:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
          + D+  +D  + +   +EEGF+ R PPHELIAKRL R+QISSFSV+EGVGRTLKGRDL +++
Subjt:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

A0A6J1IX28 uncharacterized protein LOC1114806854.4e-3657.32Show/hide
Query:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF
        M GGE G R QS ALWRSFRNGDF EEDVWNVLE+KS T   SSD  D FADSS+ ES               ARI  KSAPRSIP  F+PNG     +F
Subjt:  MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESAC-------------ARIGSKSAPRSIPPGFRPNGIRNERRF

Query:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
            D+   D  + +   +EEG + R PPHELIAKRL R+QISSFSV+EGVGRTLKGRDL +++
Subjt:  GSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28400.1 Protein of unknown function, DUF5842.3e-0540.23Show/hide
Query:  SKSAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        + S P ++P   +  G  + R    +R  S+ +  D D +   EG   R PPHEL+A R    +++SFSV EG GRTLKGRDL R++
Subjt:  SKSAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

AT3G15040.1 Protein of unknown function, DUF5841.1e-0754.35Show/hide
Query:  DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        +EE      PPHE++A+ LA+S + S SV+EG GRTLKGRDLR+++
Subjt:  DEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

AT4G04630.1 Protein of unknown function, DUF5846.1e-1435.22Show/hide
Query:  GETGRRRQSRALWRSFRNGD--FGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESA---------CARIGSKSAPRSIPPGFRPNGIRNERRFGSERD
        G   R   SR +      GD  F EEDVW+VL +  T+  +       F+ SS   S+          + +   SAP ++P   +  G     R  S   
Subjt:  GETGRRRQSRALWRSFRNGD--FGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESA---------CARIGSKSAPRSIPPGFRPNGIRNERRFGSERD

Query:  ESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
          ++D  D D  G         PPHE +A++LAR+QISSFS+ EGVGRTLKGRDL +++
Subjt:  ESSSDGGDSDGVGDEEGFDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

AT4G21970.1 Protein of unknown function, DUF5841.3e-1140.14Show/hide
Query:  DFGEEDVWNVLEQKST--TPSKSSDHSDSFADSSVFESACARI---------GSK--SAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEG
        +F EE+VW+VL +  T     K S  ++ F+ SS   S+ AR          G+K  SAP +IP           + +G  +  +SS         D+EG
Subjt:  DFGEEDVWNVLEQKST--TPSKSSDHSDSFADSSVFESACARI---------GSK--SAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEG

Query:  FDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK
             PPHEL+AKRLAR+QISSFS+ EG+GRTLKGRDL + +
Subjt:  FDYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLK

AT5G60680.1 Protein of unknown function, DUF5843.3e-0734.35Show/hide
Query:  DFGEEDVWNVLEQKSTTPSK--SSDHSDSFADSSVFESACARIGSKSAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEGFDYRAPPHELI
        +F E D++N +   S    +  SS        S+   +A +   + S P ++P   +   +R E R    R    +D  D D   +E+G D+  PPHE +
Subjt:  DFGEEDVWNVLEQKSTTPSK--SSDHSDSFADSSVFESACARIGSKSAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEGFDYRAPPHELI

Query:  AKRLARSQISSFSVVEGVGRTLKGRDLRRLK
        AK    ++++SFSV EGVGRTLKGRDL R++
Subjt:  AKRLARSQISSFSVVEGVGRTLKGRDLRRLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGGCGGCGAAACTGGCCGGAGAAGACAGAGCCGCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGGAGAAGAAGACGTCTGGAACGTCCTCGAACAGAAATC
AACAACGCCTTCAAAATCCTCCGATCATTCCGATTCCTTCGCCGATTCGTCCGTTTTCGAATCCGCTTGTGCTCGGATTGGTTCGAAATCGGCTCCTCGGTCGATTCCGC
CGGGGTTTAGACCGAACGGAATTAGAAACGAAAGGAGATTCGGTTCGGAGCGCGATGAGTCTTCGAGTGACGGCGGCGATAGCGACGGAGTTGGCGATGAGGAAGGATTT
GATTACAGAGCTCCGCCGCATGAATTGATAGCGAAGAGACTGGCTAGGTCTCAGATTTCGTCGTTTTCTGTGGTCGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCT
GCGTAGACTTAAAGTTGGACATATTTATAATTTGAAAAAACTGAAAATATTCTCAGTTGGGAGAGCGTCAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGGCGGCGAAACTGGCCGGAGAAGACAGAGCCGCGCTCTGTGGCGGTCGTTCAGAAACGGCGATTTCGGAGAAGAAGACGTCTGGAACGTCCTCGAACAGAAATC
AACAACGCCTTCAAAATCCTCCGATCATTCCGATTCCTTCGCCGATTCGTCCGTTTTCGAATCCGCTTGTGCTCGGATTGGTTCGAAATCGGCTCCTCGGTCGATTCCGC
CGGGGTTTAGACCGAACGGAATTAGAAACGAAAGGAGATTCGGTTCGGAGCGCGATGAGTCTTCGAGTGACGGCGGCGATAGCGACGGAGTTGGCGATGAGGAAGGATTT
GATTACAGAGCTCCGCCGCATGAATTGATAGCGAAGAGACTGGCTAGGTCTCAGATTTCGTCGTTTTCTGTGGTCGAAGGAGTTGGAAGAACTTTGAAAGGGAGAGATCT
GCGTAGACTTAAAGTTGGACATATTTATAATTTGAAAAAACTGAAAATATTCTCAGTTGGGAGAGCGTCAGACTGA
Protein sequenceShow/hide protein sequence
MDGGETGRRRQSRALWRSFRNGDFGEEDVWNVLEQKSTTPSKSSDHSDSFADSSVFESACARIGSKSAPRSIPPGFRPNGIRNERRFGSERDESSSDGGDSDGVGDEEGF
DYRAPPHELIAKRLARSQISSFSVVEGVGRTLKGRDLRRLKVGHIYNLKKLKIFSVGRASD