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Sed0014509 (gene) of Chayote v1 genome

Gene IDSed0014509
OrganismSechium edule (Chayote v1)
DescriptionSTE20/SPS1-related proline-alanine-rich protein kinase-like
Genome locationLG10:35580308..35581028
RNA-Seq ExpressionSed0014509
SyntenySed0014509
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016020 - membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571852.1 hypothetical protein SDJN03_28580, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1163.74Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF
        MA R+F+ +LL++ALVASPA A HHHT  KSP+PAPSP  V+  SL P    A SPV APAPA S AG   G G +GSMAVG GIFAAALF
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF

KGN43805.2 hypothetical protein Csa_017194, partial [Cucumis sativus]2.5e-1670.97Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGI-FAAALFV
        MA R+F+ LLLVLALVAS ATA HHH+ PKSP+PAPSPA V APS+PP SSI+G+PVEAPAPA + AG      VSGSMAV  GI FAAALFV
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGI-FAAALFV

XP_022952911.1 STE20/SPS1-related proline-alanine-rich protein kinase-like [Cucurbita moschata]4.2e-1163.74Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF
        MA R+F+  LL++ALVASPA A HHHT  KSP+PAPSP  V+  SL P    A SPV APAPA S AG   G G +GSMAVG GIFAAALF
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF

XP_023554722.1 uncharacterized protein LOC111811901 [Cucurbita pepo subsp. pepo]3.8e-1262.64Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF
        MA R+F+ +LL++ALVASPA A HHHT  KSP+PAPSP    AP  P     A SPV APAPA S AG   G G +GSMAVG GIFAAALF
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF

TrEMBL top hitse value%identityAlignment
A0A0A0K427 Uncharacterized protein1.2e-1670.97Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGI-FAAALFV
        MA R+F+ LLLVLALVAS ATA HHH+ PKSP+PAPSPA V APS+PP SSI+G+PVEAPAPA + AG      VSGSMAV  GI FAAALFV
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGI-FAAALFV

A0A6J1GLJ6 STE20/SPS1-related proline-alanine-rich protein kinase-like2.0e-1163.74Show/hide
Query:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF
        MA R+F+  LL++ALVASPA A HHHT  KSP+PAPSP  V+  SL P    A SPV APAPA S AG   G G +GSMAVG GIFAAALF
Subjt:  MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTCAGAAATTTCGTCGCTCTTCTTTTGGTTCTGGCGTTGGTAGCTTCTCCAGCCACGGCGGCGCATCATCACACGCAGCCCAAGTCGCCGTCGCCGGCTCCTTC
TCCGGCCACCGTGGCGGCGCCGTCGCTTCCGCCGTCGTCGTCGATTGCCGGGAGTCCTGTTGAGGCGCCTGCACCGGCACCAAGCGCCGCCGGTTTCGCTACCGGGTTTG
GGGTTTCTGGATCTATGGCTGTTGGTTTTGGGATTTTTGCTGCTGCTTTGTTCGTTTAG
mRNA sequenceShow/hide mRNA sequence
TCGAGATCTCCGCCAATCAAAATCCAACGGTCATATCCCTCCCATCATTATAAAACCCCTTCAAAATCTCCCCCCTCAAATCCGCAAACACCAAAACATTTCTCCAATTC
TCAAAACCCTAAAATCCTCTGCTTCTAAATGGCGTTCAGAAATTTCGTCGCTCTTCTTTTGGTTCTGGCGTTGGTAGCTTCTCCAGCCACGGCGGCGCATCATCACACGC
AGCCCAAGTCGCCGTCGCCGGCTCCTTCTCCGGCCACCGTGGCGGCGCCGTCGCTTCCGCCGTCGTCGTCGATTGCCGGGAGTCCTGTTGAGGCGCCTGCACCGGCACCA
AGCGCCGCCGGTTTCGCTACCGGGTTTGGGGTTTCTGGATCTATGGCTGTTGGTTTTGGGATTTTTGCTGCTGCTTTGTTCGTTTAGATGATTTTTTGTTTTTAGAATTT
TCGTTTCTGAGTTTTGATTGTTATTTGTTTCATTATATTTGTATGATTTTTTTGTCATACATTATATTTAGATCATTGTTATTATTTATTATTATTCGGTTATGAGTTTA
TTATTACCGGCATTTGTTAAATTTTACTTTTTCCATTAAATCTACACTTAGGGCTCGAGCTGTACTTTTAAGAAATGGTTGTTTGTAAATGGCTCTATGTTAATCCATTT
GAATTTTTTGTTTTTGAAATTTATTTTCAATTTCTTTACAAATGTTCATATAATAATTTTA
Protein sequenceShow/hide protein sequence
MAFRNFVALLLVLALVASPATAAHHHTQPKSPSPAPSPATVAAPSLPPSSSIAGSPVEAPAPAPSAAGFATGFGVSGSMAVGFGIFAAALFV