; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0014516 (gene) of Chayote v1 genome

Gene IDSed0014516
OrganismSechium edule (Chayote v1)
Description50S ribosomal protein L6
Genome locationLG04:43271692..43274719
RNA-Seq ExpressionSed0014516
SyntenySed0014516
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000702 - Ribosomal protein L6
IPR002358 - Ribosomal protein L6, conserved site
IPR019906 - Ribosomal protein L6, bacterial-type
IPR020040 - Ribosomal protein L6, alpha-beta domain
IPR036789 - Ribosomal protein L6, alpha-beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022136314.1 50S ribosomal protein L6, chloroplastic [Momordica charantia]1.9e-11391.15Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV H G ++KTIECKESRIGKQPIQVPSNV+I LQGQDLKVKGPLGELS+LYPREVK+EREDSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A++TRRA QMHGLFRTLTDNMVVGVS+GF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

XP_022930652.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita moschata]1.3e-11493.36Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPV H   ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSLLYPREVK+ER+DSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AL+TRRANQMHGLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

XP_022988916.1 50S ribosomal protein L6, chloroplastic isoform X2 [Cucurbita maxima]3.8e-11492.92Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPV H   ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSLLYPREVK+ER+DSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AL+TRRANQMHGLFRTLTDNMV+GVSKGF+KKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIP+GLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

XP_023530191.1 50S ribosomal protein L6, chloroplastic [Cucurbita pepo subsp. pepo]1.9e-11392.04Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTLSIPFQTSNFRSTFLGEKNGFSAST+PV H   +++TIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSLLYPREVK+ER+D+GILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AL+TRRANQMHGLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

XP_023554603.1 50S ribosomal protein L6, chloroplastic-like [Cucurbita pepo subsp. pepo]3.3e-11093.95Show/hide
Query:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH
        +NFRSTFLGEKNGF+ STMPV HTGF++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELS+LYPREVK+EREDSGILRV+KAL+TRRANQMH
Subjt:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH

Query:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DEIVRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

TrEMBL top hitse value%identityAlignment
A0A6J1C3Z5 50S ribosomal protein L6, chloroplastic9.1e-11491.15Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTL+IPFQTSNFRSTFLGEKNGFS STMPV H G ++KTIECKESRIGKQPIQVPSNV+I LQGQDLKVKGPLGELS+LYPREVK+EREDSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        A++TRRA QMHGLFRTLTDNMVVGVS+GF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1ER61 50S ribosomal protein L6, chloroplastic isoform X26.3e-11593.36Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPV H   ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSLLYPREVK+ER+DSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AL+TRRANQMHGLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIP+GLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

A0A6J1GLT4 50S ribosomal protein L6, chloroplastic-like8.0e-11093.49Show/hide
Query:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH
        +NFRSTFLGEKNGF+ STMPV HTG ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELS+LYPREVK+EREDSGILRV+KAL+TRRANQMH
Subjt:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH

Query:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DEIVRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1HVU0 50S ribosomal protein L6, chloroplastic-like1.1e-10892.56Show/hide
Query:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH
        +NFRSTFLGEKNGF+ STMPV HTG ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELS++YPREVK+EREDSGILRV+KAL+TRRANQMH
Subjt:  SNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMH

Query:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
        GLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA+LEGKDLVLNLGFSHPV MAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA
Subjt:  GLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYA

Query:  DEIVRRKEGKAGKKK
        DEIVRRKEGKAGKKK
Subjt:  DEIVRRKEGKAGKKK

A0A6J1JIK5 50S ribosomal protein L6, chloroplastic isoform X21.8e-11492.92Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MASTLSIPFQTSNFRSTFLGEKNGFSASTMPV H   ++KTIECKESRIGKQPIQVPSNV ITLQGQDLKVKGPLGELSLLYPREVK+ER+DSGILRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
        AL+TRRANQMHGLFRTLTDNMV+GVSKGF+KKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIP+GLQV VEENTRITVSGYDKCAIGQFAASIRQWRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKYADE+VRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

SwissProt top hitse value%identityAlignment
B0C1E7 50S ribosomal protein L64.0e-5057.54Show/hide
Query:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG
        SRIGK PI +P  V +T++GQ + VKGP GELS     EV +E+ D+ ++ V +  ++R A Q HGL RTL  NMV GVSKGF+KKLQ+ GVGYRA ++G
Subjt:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
        ++L+LN+G+S+PV +  PEG+QV VE NT + VSG +K  +G  AA IR  RPPEPYKGKG++YADE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B1WQS5 50S ribosomal protein L61.2e-4954.75Show/hide
Query:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG
        SRIGK+PI +P+ V I ++GQ + VKGP G L L  P EV + +E   +  V++  D+R A + HGLFRTL  NM+ GVS+GF+K+L + GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P+G+ V VE NT++ VSG DK  +G  AA IR  RPPEPYKGKG++Y DE VRRK GKAGKK
Subjt:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

B7KI01 50S ribosomal protein L66.8e-5055.31Show/hide
Query:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG
        SRIGK+PI +P+ V + + G  + VKGP GEL    P  V +E +D G+LRV +  D+R A Q HGL RTL  NMV GVSKGF+K+L++ GVGYRA  +G
Subjt:  SRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEG

Query:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK
          L LN+G+S PV M +P G+ V VE+NT IT++G DK  +G  AA IR  RPPEPYKGKG++Y  E+VRRK GK GKK
Subjt:  KDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGKK

O23049 50S ribosomal protein L6, chloroplastic1.7e-9375.66Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MAS+L   FQ    RS FLG++N F  S+ P    G+  KTIECKESRIGKQPI VPSNV I L+GQDLKVKGPLGEL+L YPREV+L +E+SG LRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
         ++TRRANQMHGLFRTLTDNMVVGVSKGF+KKL LVGVGYRA ++GK+LVLNLGFSHPV+M IP+ L+VKVEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

P82193 50S ribosomal protein L6, chloroplastic2.3e-9073.87Show/hide
Query:  LSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDT
        +S+P   S+ +S FLG K   S S +PV   GF +K+++CKESRIGKQPI VP+NV I ++GQDLKVKGPLGELS+ YPREV +E+++SG LRVRKA++T
Subjt:  LSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDT

Query:  RRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYK
        RRANQMHGLFRTLTDNMVVGVSKGF+KKLQLVGVGYRA +EGKDL+L+LGFSHPVRMAIP+ LQVKVEENT++TVSG DK  +GQFAA+IR WRPPEPYK
Subjt:  RRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYK

Query:  GKGVKYADEIVRRKEGKAGKKK
        GKGV+Y DE+VRRKEGKAGKKK
Subjt:  GKGVKYADEIVRRKEGKAGKKK

Arabidopsis top hitse value%identityAlignment
AT1G05190.1 Ribosomal protein L6 family1.2e-9475.66Show/hide
Query:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK
        MAS+L   FQ    RS FLG++N F  S+ P    G+  KTIECKESRIGKQPI VPSNV I L+GQDLKVKGPLGEL+L YPREV+L +E+SG LRV+K
Subjt:  MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRK

Query:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP
         ++TRRANQMHGLFRTLTDNMVVGVSKGF+KKL LVGVGYRA ++GK+LVLNLGFSHPV+M IP+ L+VKVEENTRITVSGYDK  IGQFAA++R+WRPP
Subjt:  ALDTRRANQMHGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPP

Query:  EPYKGKGVKYADEIVRRKEGKAGKKK
        EPYKGKGVKY+DEIVRRKEGKAGKKK
Subjt:  EPYKGKGVKYADEIVRRKEGKAGKKK

AT2G18400.1 ribosomal protein L6 family protein2.6e-2046.94Show/hide
Query:  FDKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK
        F + L++VGVGY+A  E  G+ L L LG+SH V +A+P  ++V   +N  +  +G DK  + QFAA++R  +PPEPYKGKG+ Y DE+V++K+GK  K
Subjt:  FDKKLQLVGVGYRAILE--GKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEGKAGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGACGCTATCCATCCCTTTCCAAACCAGCAATTTTCGGTCTACTTTTTTGGGAGAGAAAAATGGATTCTCTGCTTCTACAATGCCTGTACGTCATACTGGTTT
CGTGAAGAAAACTATCGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTTGTCATCACATTACAGGGTCAGGATTTGAAAGTTAAGGGTC
CTTTGGGAGAGCTTTCACTACTTTATCCACGAGAGGTGAAGCTTGAGAGGGAAGATTCTGGGATCCTGAGGGTTAGAAAGGCACTGGATACAAGAAGAGCCAACCAAATG
CATGGGCTTTTCAGGACCCTTACGGACAATATGGTAGTAGGAGTATCCAAGGGGTTCGATAAGAAACTTCAACTGGTCGGTGTTGGTTATCGAGCAATATTAGAAGGAAA
AGACTTGGTATTAAATCTAGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGAAGGTCTTCAAGTAAAAGTGGAAGAAAACACAAGAATTACTGTTAGTGGATATGATA
AATGTGCAATTGGTCAGTTTGCTGCATCTATTAGACAATGGAGACCTCCAGAACCATACAAGGGTAAAGGAGTGAAATATGCTGATGAAATTGTCAGAAGAAAGGAGGGA
AAAGCAGGGAAGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTGTTTTGGTCATTTCGAATTGCGATGACAGTCTTTTTGGATAGGCCGCTCTCACAATAAGTGGTTCCGTGCAACTGAGTTCTTCACCGGAAACAGCCGGCTATGGCTTC
GACGCTATCCATCCCTTTCCAAACCAGCAATTTTCGGTCTACTTTTTTGGGAGAGAAAAATGGATTCTCTGCTTCTACAATGCCTGTACGTCATACTGGTTTCGTGAAGA
AAACTATCGAATGCAAGGAATCACGAATAGGGAAGCAACCAATTCAAGTGCCATCCAATGTTGTCATCACATTACAGGGTCAGGATTTGAAAGTTAAGGGTCCTTTGGGA
GAGCTTTCACTACTTTATCCACGAGAGGTGAAGCTTGAGAGGGAAGATTCTGGGATCCTGAGGGTTAGAAAGGCACTGGATACAAGAAGAGCCAACCAAATGCATGGGCT
TTTCAGGACCCTTACGGACAATATGGTAGTAGGAGTATCCAAGGGGTTCGATAAGAAACTTCAACTGGTCGGTGTTGGTTATCGAGCAATATTAGAAGGAAAAGACTTGG
TATTAAATCTAGGGTTCTCTCATCCAGTTAGAATGGCCATTCCTGAAGGTCTTCAAGTAAAAGTGGAAGAAAACACAAGAATTACTGTTAGTGGATATGATAAATGTGCA
ATTGGTCAGTTTGCTGCATCTATTAGACAATGGAGACCTCCAGAACCATACAAGGGTAAAGGAGTGAAATATGCTGATGAAATTGTCAGAAGAAAGGAGGGAAAAGCAGG
GAAGAAGAAGTGATGGTATGTAATTCTCTGTTGTTTTTTTTTTCTCTCTCTCTTTTTGAAATATTTGCACCTTTTCCCAGTTTCAGGAAGGATTATTAGCATCATAAATT
TATGAGAGTCATCTTCTTCCTCTCCAGTTTTCTCAGTGAATTTTCAGTTTAATTGCCTCATTAGTTTTCAGTATGACCATGTTTTTATATAATGTATGCCTCATACAAAA
AGATCACATTTTCTTTTGTACCTTGTGCTTTAAGTTTCATTAGGCTATTGCGCCACTATAAGGGTTGGTGGTATGTTGATTTTATTATTTAGTGGTAATTCAGTTCAACA
CCACGGTTACGGGTTAAA
Protein sequenceShow/hide protein sequence
MASTLSIPFQTSNFRSTFLGEKNGFSASTMPVRHTGFVKKTIECKESRIGKQPIQVPSNVVITLQGQDLKVKGPLGELSLLYPREVKLEREDSGILRVRKALDTRRANQM
HGLFRTLTDNMVVGVSKGFDKKLQLVGVGYRAILEGKDLVLNLGFSHPVRMAIPEGLQVKVEENTRITVSGYDKCAIGQFAASIRQWRPPEPYKGKGVKYADEIVRRKEG
KAGKKK